Epidemiological survey of porcine epidemic diarrhea virus in swine farms in Shanghai, China
An epidemiological survey of porcine diarrheal disease prevalence between September 2011 and January 2012 revealed that porcine epidemic diarrhea virus (PEDV) contributed to outbreaks of diarrhea in pig farms in Shanghai, China. The distribution profile of 10 PEDV strains revealed three distinct gen...
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| Veröffentlicht in: | Archives of virology 2013-11, Vol.158 (11), p.2227-2231 |
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| creator | Ge, Fei-Fei Yang, De-Quan Ju, Hou-Bin Wang, Jian Liu, Jian Liu, Pei-Hong Zhou, Jin-Ping |
| description | An epidemiological survey of porcine diarrheal disease prevalence between September 2011 and January 2012 revealed that porcine epidemic diarrhea virus (PEDV) contributed to outbreaks of diarrhea in pig farms in Shanghai, China. The distribution profile of 10 PEDV strains revealed three distinct genotypes coexisting in the same pig farm. Two of the ten field strains that were isolated exhibited a distinct evolution from the others. In addition to PEDV, other enteric pathogens, including porcine kobuvirus, porcine teschovirus and Lawsonia intracellularis, were identified. |
| doi_str_mv | 10.1007/s00705-013-1722-7 |
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The distribution profile of 10 PEDV strains revealed three distinct genotypes coexisting in the same pig farm. Two of the ten field strains that were isolated exhibited a distinct evolution from the others. In addition to PEDV, other enteric pathogens, including porcine kobuvirus, porcine teschovirus and Lawsonia intracellularis, were identified.</description><identifier>ISSN: 0304-8608</identifier><identifier>EISSN: 1432-8798</identifier><identifier>DOI: 10.1007/s00705-013-1722-7</identifier><identifier>PMID: 23685898</identifier><language>eng</language><publisher>Vienna: Springer-Verlag</publisher><subject>Animal Husbandry ; Animals ; Annealing ; Biomedical and Life Sciences ; Biomedicine ; China ; China - epidemiology ; Coronavirus Infections ; Coronavirus Infections - veterinary ; Coronavirus Infections - virology ; Diarrhea ; Disease Outbreaks ; disease prevalence ; Epidemics ; Epidemiology ; evolution ; farms ; Genes ; genetics ; Genomes ; genotype ; Hogs ; Infectious Diseases ; isolation & purification ; Kobuvirus ; Lawsonia intracellularis ; Medical Microbiology ; Molecular Sequence Data ; Original Article ; Pathogens ; Phylogenetics ; Phylogeny ; Polymerase chain reaction ; Porcine epidemic diarrhea virus ; Porcine epidemic diarrhea virus - genetics ; Porcine epidemic diarrhea virus - isolation & purification ; Porcine teschovirus ; Rotavirus ; Sequence Analysis, DNA ; surveys ; Swine ; Swine Diseases ; Swine Diseases - epidemiology ; Swine Diseases - virology ; Teschovirus A ; veterinary ; Virology ; Viruses</subject><ispartof>Archives of virology, 2013-11, Vol.158 (11), p.2227-2231</ispartof><rights>Springer-Verlag Wien 2013</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c462t-f00316d5d46c54fbd3fb53254c5aa0c34ed34a38de22f8ca52018b958598b8483</citedby><cites>FETCH-LOGICAL-c462t-f00316d5d46c54fbd3fb53254c5aa0c34ed34a38de22f8ca52018b958598b8483</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00705-013-1722-7$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00705-013-1722-7$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23685898$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ge, Fei-Fei</creatorcontrib><creatorcontrib>Yang, De-Quan</creatorcontrib><creatorcontrib>Ju, Hou-Bin</creatorcontrib><creatorcontrib>Wang, Jian</creatorcontrib><creatorcontrib>Liu, Jian</creatorcontrib><creatorcontrib>Liu, Pei-Hong</creatorcontrib><creatorcontrib>Zhou, Jin-Ping</creatorcontrib><title>Epidemiological survey of porcine epidemic diarrhea virus in swine farms in Shanghai, China</title><title>Archives of virology</title><addtitle>Arch Virol</addtitle><addtitle>Arch Virol</addtitle><description>An epidemiological survey of porcine diarrheal disease prevalence between September 2011 and January 2012 revealed that porcine epidemic diarrhea virus (PEDV) contributed to outbreaks of diarrhea in pig farms in Shanghai, China. The distribution profile of 10 PEDV strains revealed three distinct genotypes coexisting in the same pig farm. Two of the ten field strains that were isolated exhibited a distinct evolution from the others. In addition to PEDV, other enteric pathogens, including porcine kobuvirus, porcine teschovirus and Lawsonia intracellularis, were identified.</description><subject>Animal Husbandry</subject><subject>Animals</subject><subject>Annealing</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>China</subject><subject>China - epidemiology</subject><subject>Coronavirus Infections</subject><subject>Coronavirus Infections - veterinary</subject><subject>Coronavirus Infections - virology</subject><subject>Diarrhea</subject><subject>Disease Outbreaks</subject><subject>disease prevalence</subject><subject>Epidemics</subject><subject>Epidemiology</subject><subject>evolution</subject><subject>farms</subject><subject>Genes</subject><subject>genetics</subject><subject>Genomes</subject><subject>genotype</subject><subject>Hogs</subject><subject>Infectious Diseases</subject><subject>isolation & purification</subject><subject>Kobuvirus</subject><subject>Lawsonia intracellularis</subject><subject>Medical Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Original Article</subject><subject>Pathogens</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Polymerase chain reaction</subject><subject>Porcine epidemic diarrhea virus</subject><subject>Porcine epidemic diarrhea virus - genetics</subject><subject>Porcine epidemic diarrhea virus - isolation & purification</subject><subject>Porcine teschovirus</subject><subject>Rotavirus</subject><subject>Sequence Analysis, DNA</subject><subject>surveys</subject><subject>Swine</subject><subject>Swine Diseases</subject><subject>Swine Diseases - epidemiology</subject><subject>Swine Diseases - virology</subject><subject>Teschovirus A</subject><subject>veterinary</subject><subject>Virology</subject><subject>Viruses</subject><issn>0304-8608</issn><issn>1432-8798</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNqNkstOxCAYhYnR6Hh5ADdK4saFVa4tXZqJt8TEhbpyQSiFGUxbRphqfHupVWNcqCwgP3zncDkAsIvRMUaoOImpQzxDmGa4ICQrVsAEM0oyUZRiFUwQRSwTORIbYDPGR4TSBOXrYIPQXHBRigl4OFu42rTON37mtGpg7MOzeYXewoUP2nUGmpHQsHYqhLlR8NmFPkLXwfgyAFaF9r28natuNlfuCE7nrlPbYM2qJpqdj3EL3J-f3U0vs-ubi6vp6XWmWU6WmU3HwnnNa5ZrzmxVU1txSjjTXCmkKTM1ZYqK2hBihVacICyqkgteikowQbfA4ei7CP6pN3EpWxe1aRrVGd9HicvUckwL-jfKki1FSJB_oKzAqCR0cD34gT76PnTpzgOVE8wZxonCI6WDjzEYKxfBtSq8SozkkKcc85QpTznkKYuk2ftw7qvW1F-KzwATQEYgpqVuZsK3rX9x3R9FVnmpZsFFeX-bXpWlH4JJmfJ4A-ZLsak</recordid><startdate>20131101</startdate><enddate>20131101</enddate><creator>Ge, Fei-Fei</creator><creator>Yang, De-Quan</creator><creator>Ju, Hou-Bin</creator><creator>Wang, Jian</creator><creator>Liu, Jian</creator><creator>Liu, Pei-Hong</creator><creator>Zhou, Jin-Ping</creator><general>Springer-Verlag</general><general>Springer Vienna</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope><scope>7T2</scope><scope>7U2</scope><scope>C1K</scope><scope>7S9</scope><scope>L.6</scope></search><sort><creationdate>20131101</creationdate><title>Epidemiological survey of porcine epidemic diarrhea virus in swine farms in Shanghai, China</title><author>Ge, Fei-Fei ; Yang, De-Quan ; Ju, Hou-Bin ; Wang, Jian ; Liu, Jian ; Liu, Pei-Hong ; Zhou, Jin-Ping</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c462t-f00316d5d46c54fbd3fb53254c5aa0c34ed34a38de22f8ca52018b958598b8483</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Animal Husbandry</topic><topic>Animals</topic><topic>Annealing</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>China</topic><topic>China - epidemiology</topic><topic>Coronavirus Infections</topic><topic>Coronavirus Infections - veterinary</topic><topic>Coronavirus Infections - virology</topic><topic>Diarrhea</topic><topic>Disease Outbreaks</topic><topic>disease prevalence</topic><topic>Epidemics</topic><topic>Epidemiology</topic><topic>evolution</topic><topic>farms</topic><topic>Genes</topic><topic>genetics</topic><topic>Genomes</topic><topic>genotype</topic><topic>Hogs</topic><topic>Infectious Diseases</topic><topic>isolation & purification</topic><topic>Kobuvirus</topic><topic>Lawsonia intracellularis</topic><topic>Medical Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Original Article</topic><topic>Pathogens</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>Polymerase chain reaction</topic><topic>Porcine epidemic diarrhea virus</topic><topic>Porcine epidemic diarrhea virus - genetics</topic><topic>Porcine epidemic diarrhea virus - isolation & purification</topic><topic>Porcine teschovirus</topic><topic>Rotavirus</topic><topic>Sequence Analysis, DNA</topic><topic>surveys</topic><topic>Swine</topic><topic>Swine Diseases</topic><topic>Swine Diseases - 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The distribution profile of 10 PEDV strains revealed three distinct genotypes coexisting in the same pig farm. Two of the ten field strains that were isolated exhibited a distinct evolution from the others. In addition to PEDV, other enteric pathogens, including porcine kobuvirus, porcine teschovirus and Lawsonia intracellularis, were identified.</abstract><cop>Vienna</cop><pub>Springer-Verlag</pub><pmid>23685898</pmid><doi>10.1007/s00705-013-1722-7</doi><tpages>5</tpages></addata></record> |
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| subjects | Animal Husbandry Animals Annealing Biomedical and Life Sciences Biomedicine China China - epidemiology Coronavirus Infections Coronavirus Infections - veterinary Coronavirus Infections - virology Diarrhea Disease Outbreaks disease prevalence Epidemics Epidemiology evolution farms Genes genetics Genomes genotype Hogs Infectious Diseases isolation & purification Kobuvirus Lawsonia intracellularis Medical Microbiology Molecular Sequence Data Original Article Pathogens Phylogenetics Phylogeny Polymerase chain reaction Porcine epidemic diarrhea virus Porcine epidemic diarrhea virus - genetics Porcine epidemic diarrhea virus - isolation & purification Porcine teschovirus Rotavirus Sequence Analysis, DNA surveys Swine Swine Diseases Swine Diseases - epidemiology Swine Diseases - virology Teschovirus A veterinary Virology Viruses |
| title | Epidemiological survey of porcine epidemic diarrhea virus in swine farms in Shanghai, China |
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