Gold nanoparticle-based probes for the colorimetric detection of Mycobacterium avium subspecies paratuberculosis DNA
Gold nanoparticle (AuNP) is considered to be the most stable metal nanoparticle having the ability to be functionalized with biomolecules. Recently, AuNP-based DNA detection methods captured the interest of researchers worldwide. Paratuberculosis or Johne's disease, a chronic gastroenteritis in...
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Veröffentlicht in: | Biochemical and biophysical research communications 2018-02, Vol.496 (3), p.988-997 |
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creator | Ganareal, Thenor Aristotile Charles S. Balbin, Michelle M. Monserate, Juvy J. Salazar, Joel R. Mingala, Claro N. |
description | Gold nanoparticle (AuNP) is considered to be the most stable metal nanoparticle having the ability to be functionalized with biomolecules. Recently, AuNP-based DNA detection methods captured the interest of researchers worldwide. Paratuberculosis or Johne's disease, a chronic gastroenteritis in ruminants caused by Mycobacterium avium subsp. paratuberculosis (MAP), was found to have negative effect in the livestock industry. In this study, AuNP-based probes were evaluated for the specific and sensitive detection of MAP DNA. AuNP-based probe was produced by functionalization of AuNPs with thiol-modified oligonucleotide and was confirmed by Fourier-Transform Infrared (FTIR) spectroscopy. UV–Vis spectroscopy and Scanning Electron Microscopy (SEM) were used to characterize AuNPs. DNA detection was done by hybridization of 10 μL of DNA with 5 μL of probe at 63 °C for 10 min and addition of 3 μL salt solution. The method was specific to MAP with detection limit of 103 ng. UV–Vis and SEM showed dispersion and aggregation of the AuNPs for the positive and negative results, respectively, with no observed particle growth. This study therefore reports an AuNP-based probes which can be used for the specific and sensitive detection of MAP DNA. |
doi_str_mv | 10.1016/j.bbrc.2018.01.033 |
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Recently, AuNP-based DNA detection methods captured the interest of researchers worldwide. Paratuberculosis or Johne's disease, a chronic gastroenteritis in ruminants caused by Mycobacterium avium subsp. paratuberculosis (MAP), was found to have negative effect in the livestock industry. In this study, AuNP-based probes were evaluated for the specific and sensitive detection of MAP DNA. AuNP-based probe was produced by functionalization of AuNPs with thiol-modified oligonucleotide and was confirmed by Fourier-Transform Infrared (FTIR) spectroscopy. UV–Vis spectroscopy and Scanning Electron Microscopy (SEM) were used to characterize AuNPs. DNA detection was done by hybridization of 10 μL of DNA with 5 μL of probe at 63 °C for 10 min and addition of 3 μL salt solution. The method was specific to MAP with detection limit of 103 ng. UV–Vis and SEM showed dispersion and aggregation of the AuNPs for the positive and negative results, respectively, with no observed particle growth. This study therefore reports an AuNP-based probes which can be used for the specific and sensitive detection of MAP DNA.</description><identifier>ISSN: 0006-291X</identifier><identifier>EISSN: 1090-2104</identifier><identifier>DOI: 10.1016/j.bbrc.2018.01.033</identifier><identifier>PMID: 29366791</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Biosensing Techniques - methods ; Colorimetric detection ; Colorimetry - methods ; DNA - genetics ; DNA - isolation & purification ; DNA detection ; Gold - chemistry ; Gold nanoparticles ; In Situ Hybridization - methods ; Metal Nanoparticles - chemistry ; Molecular Probe Techniques ; Molecular Probes - chemistry ; Mycobacterium avium - genetics ; Mycobacterium avium - isolation & purification ; Mycobacterium avium subsp. paratuberculosis ; Reproducibility of Results ; Sensitivity and Specificity</subject><ispartof>Biochemical and biophysical research communications, 2018-02, Vol.496 (3), p.988-997</ispartof><rights>2018 Elsevier Inc.</rights><rights>Copyright © 2018 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c356t-64e59ee7a740e16b65ae3a10db86e7be81fd234a2ca8d3b423688af547c4d09b3</citedby><cites>FETCH-LOGICAL-c356t-64e59ee7a740e16b65ae3a10db86e7be81fd234a2ca8d3b423688af547c4d09b3</cites><orcidid>0000-0002-0435-2156</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.bbrc.2018.01.033$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3548,27923,27924,45994</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29366791$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ganareal, Thenor Aristotile Charles S.</creatorcontrib><creatorcontrib>Balbin, Michelle M.</creatorcontrib><creatorcontrib>Monserate, Juvy J.</creatorcontrib><creatorcontrib>Salazar, Joel R.</creatorcontrib><creatorcontrib>Mingala, Claro N.</creatorcontrib><title>Gold nanoparticle-based probes for the colorimetric detection of Mycobacterium avium subspecies paratuberculosis DNA</title><title>Biochemical and biophysical research communications</title><addtitle>Biochem Biophys Res Commun</addtitle><description>Gold nanoparticle (AuNP) is considered to be the most stable metal nanoparticle having the ability to be functionalized with biomolecules. Recently, AuNP-based DNA detection methods captured the interest of researchers worldwide. Paratuberculosis or Johne's disease, a chronic gastroenteritis in ruminants caused by Mycobacterium avium subsp. paratuberculosis (MAP), was found to have negative effect in the livestock industry. In this study, AuNP-based probes were evaluated for the specific and sensitive detection of MAP DNA. AuNP-based probe was produced by functionalization of AuNPs with thiol-modified oligonucleotide and was confirmed by Fourier-Transform Infrared (FTIR) spectroscopy. UV–Vis spectroscopy and Scanning Electron Microscopy (SEM) were used to characterize AuNPs. DNA detection was done by hybridization of 10 μL of DNA with 5 μL of probe at 63 °C for 10 min and addition of 3 μL salt solution. The method was specific to MAP with detection limit of 103 ng. UV–Vis and SEM showed dispersion and aggregation of the AuNPs for the positive and negative results, respectively, with no observed particle growth. This study therefore reports an AuNP-based probes which can be used for the specific and sensitive detection of MAP DNA.</description><subject>Biosensing Techniques - methods</subject><subject>Colorimetric detection</subject><subject>Colorimetry - methods</subject><subject>DNA - genetics</subject><subject>DNA - isolation & purification</subject><subject>DNA detection</subject><subject>Gold - chemistry</subject><subject>Gold nanoparticles</subject><subject>In Situ Hybridization - methods</subject><subject>Metal Nanoparticles - chemistry</subject><subject>Molecular Probe Techniques</subject><subject>Molecular Probes - chemistry</subject><subject>Mycobacterium avium - genetics</subject><subject>Mycobacterium avium - isolation & purification</subject><subject>Mycobacterium avium subsp. paratuberculosis</subject><subject>Reproducibility of Results</subject><subject>Sensitivity and Specificity</subject><issn>0006-291X</issn><issn>1090-2104</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kE1v1DAURS0EokPpH2CBvGST8F6ccWKJTdVCQSp0U6TuLH-8CI8y8WA7lfrv8WgKSzbvbe490j2MvUNoEVB-3LXWJtd2gGML2IIQL9gGQUHTIfQv2QYAZNMpfDhjb3LeASD2Ur1mZ50SUg4KN6zcxNnzxSzxYFIJbqbGmkyeH1K0lPkUEy-_iLs4xxT2VFJw3FMhV0JceJz49ycXrXGFUlj33Dweb15tPpALFVCxpqyWklvnmEPm1z8u37JXk5kzXTz_c_bzy-f7q6_N7d3Nt6vL28aJrSyN7GmriAYz9EAordwaEgbB21HSYGnEyXeiN50zoxe274QcRzNt-8H1HpQV5-zDiVvH_F4pF70P2dE8m4XimjUqhTgOCvoa7U5Rl2LOiSZ9qHNNetII-mhb7_TRtj7a1oC62q6l98_81e7J_6v81VsDn04BqisfAyWdq5TFkQ-pGtQ-hv_x_wDqh5NV</recordid><startdate>20180212</startdate><enddate>20180212</enddate><creator>Ganareal, Thenor Aristotile Charles S.</creator><creator>Balbin, Michelle M.</creator><creator>Monserate, Juvy J.</creator><creator>Salazar, Joel R.</creator><creator>Mingala, Claro N.</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-0435-2156</orcidid></search><sort><creationdate>20180212</creationdate><title>Gold nanoparticle-based probes for the colorimetric detection of Mycobacterium avium subspecies paratuberculosis DNA</title><author>Ganareal, Thenor Aristotile Charles S. ; Balbin, Michelle M. ; Monserate, Juvy J. ; Salazar, Joel R. ; Mingala, Claro N.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c356t-64e59ee7a740e16b65ae3a10db86e7be81fd234a2ca8d3b423688af547c4d09b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Biosensing Techniques - methods</topic><topic>Colorimetric detection</topic><topic>Colorimetry - methods</topic><topic>DNA - genetics</topic><topic>DNA - isolation & purification</topic><topic>DNA detection</topic><topic>Gold - chemistry</topic><topic>Gold nanoparticles</topic><topic>In Situ Hybridization - methods</topic><topic>Metal Nanoparticles - chemistry</topic><topic>Molecular Probe Techniques</topic><topic>Molecular Probes - chemistry</topic><topic>Mycobacterium avium - genetics</topic><topic>Mycobacterium avium - isolation & purification</topic><topic>Mycobacterium avium subsp. paratuberculosis</topic><topic>Reproducibility of Results</topic><topic>Sensitivity and Specificity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ganareal, Thenor Aristotile Charles S.</creatorcontrib><creatorcontrib>Balbin, Michelle M.</creatorcontrib><creatorcontrib>Monserate, Juvy J.</creatorcontrib><creatorcontrib>Salazar, Joel R.</creatorcontrib><creatorcontrib>Mingala, Claro N.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Biochemical and biophysical research communications</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ganareal, Thenor Aristotile Charles S.</au><au>Balbin, Michelle M.</au><au>Monserate, Juvy J.</au><au>Salazar, Joel R.</au><au>Mingala, Claro N.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Gold nanoparticle-based probes for the colorimetric detection of Mycobacterium avium subspecies paratuberculosis DNA</atitle><jtitle>Biochemical and biophysical research communications</jtitle><addtitle>Biochem Biophys Res Commun</addtitle><date>2018-02-12</date><risdate>2018</risdate><volume>496</volume><issue>3</issue><spage>988</spage><epage>997</epage><pages>988-997</pages><issn>0006-291X</issn><eissn>1090-2104</eissn><abstract>Gold nanoparticle (AuNP) is considered to be the most stable metal nanoparticle having the ability to be functionalized with biomolecules. Recently, AuNP-based DNA detection methods captured the interest of researchers worldwide. Paratuberculosis or Johne's disease, a chronic gastroenteritis in ruminants caused by Mycobacterium avium subsp. paratuberculosis (MAP), was found to have negative effect in the livestock industry. In this study, AuNP-based probes were evaluated for the specific and sensitive detection of MAP DNA. AuNP-based probe was produced by functionalization of AuNPs with thiol-modified oligonucleotide and was confirmed by Fourier-Transform Infrared (FTIR) spectroscopy. UV–Vis spectroscopy and Scanning Electron Microscopy (SEM) were used to characterize AuNPs. DNA detection was done by hybridization of 10 μL of DNA with 5 μL of probe at 63 °C for 10 min and addition of 3 μL salt solution. The method was specific to MAP with detection limit of 103 ng. UV–Vis and SEM showed dispersion and aggregation of the AuNPs for the positive and negative results, respectively, with no observed particle growth. This study therefore reports an AuNP-based probes which can be used for the specific and sensitive detection of MAP DNA.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>29366791</pmid><doi>10.1016/j.bbrc.2018.01.033</doi><tpages>10</tpages><orcidid>https://orcid.org/0000-0002-0435-2156</orcidid></addata></record> |
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subjects | Biosensing Techniques - methods Colorimetric detection Colorimetry - methods DNA - genetics DNA - isolation & purification DNA detection Gold - chemistry Gold nanoparticles In Situ Hybridization - methods Metal Nanoparticles - chemistry Molecular Probe Techniques Molecular Probes - chemistry Mycobacterium avium - genetics Mycobacterium avium - isolation & purification Mycobacterium avium subsp. paratuberculosis Reproducibility of Results Sensitivity and Specificity |
title | Gold nanoparticle-based probes for the colorimetric detection of Mycobacterium avium subspecies paratuberculosis DNA |
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