Fractionation of Synteny in a Genomic Region Containing Tandemly Duplicated Genes across Glycine max, Medicago truncatula, and Arabidopsis thaliana
Extended comparison of gene sequences found on homeologous soybean Bacterial Artificial Chromosomes to Medicago truncatula and Arabidopsis thaliana genomic sequences demonstrated a network of synteny within conserved regions interrupted by gene addition and/or deletions. Consolidation of gene order...
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| Veröffentlicht in: | The Journal of heredity 2008-07, Vol.99 (4), p.390-395 |
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| container_end_page | 395 |
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| container_title | The Journal of heredity |
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| creator | Schlueter, Jessica A. Scheffler, Brian E. Jackson, Scott Shoemaker, Randy C. |
| description | Extended comparison of gene sequences found on homeologous soybean Bacterial Artificial Chromosomes to Medicago truncatula and Arabidopsis thaliana genomic sequences demonstrated a network of synteny within conserved regions interrupted by gene addition and/or deletions. Consolidation of gene order among all 3 species provides a picture of ancestral gene order. The observation supports a genome history of fractionation resulting from gene loss/addition and rearrangement. In all 3 species, clusters of N-hydroxycinnamoyl/benzoyltransferase genes were identified in tandemly duplicated clusters. Parsimony-based gene trees suggest that the genes within the arrays have independently undergone tandem duplication in each species. |
| doi_str_mv | 10.1093/jhered/esn010 |
| format | Article |
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| ispartof | The Journal of heredity, 2008-07, Vol.99 (4), p.390-395 |
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| source | Oxford University Press Journals All Titles (1996-Current); MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection |
| subjects | Acyltransferases - genetics Arabidopsis - genetics Arabidopsis thaliana Botany Comparative studies Evolution, Molecular Gene Duplication Genes, Plant Genetic Variation Genome, Plant Genomics Glycine max Glycine max - genetics Medicago truncatula Medicago truncatula - genetics Phylogeny Soybeans Synteny - physiology Tandem Repeat Sequences |
| title | Fractionation of Synteny in a Genomic Region Containing Tandemly Duplicated Genes across Glycine max, Medicago truncatula, and Arabidopsis thaliana |
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