Carbazole biodegradation in gas oil/water biphasic media by a new isolated bacterium Burkholderia sp. strain IMP5GC
To select carbazole-degrading bacteria able to survive and metabolize carbazole in biphasic organic-water media and to study the factors affecting carbazole degradation in such conditions. In this research a new carbazole-degrading strain was isolated from hot springs in Mexico. This bacterium was p...
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| Veröffentlicht in: | Journal of applied microbiology 2006-04, Vol.100 (4), p.739-745 |
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| creator | Castorena, G Mugica, V Le Borgne, S Acuña, M.E Bustos-Jaimes, I Aburto, J |
| description | To select carbazole-degrading bacteria able to survive and metabolize carbazole in biphasic organic-water media and to study the factors affecting carbazole degradation in such conditions. In this research a new carbazole-degrading strain was isolated from hot springs in Mexico. This bacterium was preliminary identified as Burkholderia sp. IMP5GC and was able to grow using carbazole as sole carbon and nitrogen source. Genetic analysis showed that this bacterium carries carA genes identical to those reported in Pseudomonas resinovorans CA10. Burkholderia IMP5GC efficiently degraded carbazole in aqueous media as well as in biphasic media with n-hexadecane. Furthermore, the strain IMPGC5 efficiently reduced the concentration of carbazole and monomethyl carbazole species in gas oil-water biphasic media. This study demonstrates the biodegradation of carbazole in biphasic gas oil/water media (1 : 1), regardless of the highly toxic effects of this petroleum distillate. Biodegradation of carbazole in biphasic media contributes to the understanding and design of bioprocesses for carbazole removal from petroleum-upgrading fractions and other carbazole-rich organic mixtures. |
| doi_str_mv | 10.1111/j.1365-2672.2005.02799.x |
| format | Article |
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In this research a new carbazole-degrading strain was isolated from hot springs in Mexico. This bacterium was preliminary identified as Burkholderia sp. IMP5GC and was able to grow using carbazole as sole carbon and nitrogen source. Genetic analysis showed that this bacterium carries carA genes identical to those reported in Pseudomonas resinovorans CA10. Burkholderia IMP5GC efficiently degraded carbazole in aqueous media as well as in biphasic media with n-hexadecane. Furthermore, the strain IMPGC5 efficiently reduced the concentration of carbazole and monomethyl carbazole species in gas oil-water biphasic media. This study demonstrates the biodegradation of carbazole in biphasic gas oil/water media (1 : 1), regardless of the highly toxic effects of this petroleum distillate. Biodegradation of carbazole in biphasic media contributes to the understanding and design of bioprocesses for carbazole removal from petroleum-upgrading fractions and other carbazole-rich organic mixtures.</description><identifier>ISSN: 1364-5072</identifier><identifier>EISSN: 1365-2672</identifier><identifier>DOI: 10.1111/j.1365-2672.2005.02799.x</identifier><identifier>PMID: 16553728</identifier><identifier>CODEN: JAMIFK</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Publishing Ltd</publisher><subject>Alkanes - metabolism ; bacteria ; biodegradation ; Biodegradation, Environmental ; biodenitrogenation ; biodesulfurization ; Biological and medical sciences ; biphasic media ; Burkholderia ; Burkholderia - drug effects ; Burkholderia - genetics ; Burkholderia - metabolism ; car genes ; carbazole ; Carbazoles - metabolism ; Carbazoles - pharmacology ; carbon ; Carbon-Nitrogen Ligases - genetics ; Carcinogens, Environmental - metabolism ; Carcinogens, Environmental - pharmacology ; Culture Media ; Freshwater ; Fundamental and applied biological sciences. Psychology ; Gasoline ; genes ; Genes, Bacterial - genetics ; hexadecane ; hot springs ; Microbiology ; nitrogen ; oils ; Petroleum ; Pseudomonas ; Pseudomonas resinovorans ; Temperature ; toxicity ; Water Microbiology</subject><ispartof>Journal of applied microbiology, 2006-04, Vol.100 (4), p.739-745</ispartof><rights>2006 INIST-CNRS</rights><rights>Copyright Blackwell Publishing Apr 2006</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5459-3bec17bc8d3eafa3e082024966bad499edbb3b540e3c72dfddea4ebfd9dc1d3b3</citedby><cites>FETCH-LOGICAL-c5459-3bec17bc8d3eafa3e082024966bad499edbb3b540e3c72dfddea4ebfd9dc1d3b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fj.1365-2672.2005.02799.x$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fj.1365-2672.2005.02799.x$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>315,781,785,1418,27926,27927,45576,45577</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=17595105$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16553728$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Castorena, G</creatorcontrib><creatorcontrib>Mugica, V</creatorcontrib><creatorcontrib>Le Borgne, S</creatorcontrib><creatorcontrib>Acuña, M.E</creatorcontrib><creatorcontrib>Bustos-Jaimes, I</creatorcontrib><creatorcontrib>Aburto, J</creatorcontrib><title>Carbazole biodegradation in gas oil/water biphasic media by a new isolated bacterium Burkholderia sp. strain IMP5GC</title><title>Journal of applied microbiology</title><addtitle>J Appl Microbiol</addtitle><description>To select carbazole-degrading bacteria able to survive and metabolize carbazole in biphasic organic-water media and to study the factors affecting carbazole degradation in such conditions. In this research a new carbazole-degrading strain was isolated from hot springs in Mexico. This bacterium was preliminary identified as Burkholderia sp. IMP5GC and was able to grow using carbazole as sole carbon and nitrogen source. Genetic analysis showed that this bacterium carries carA genes identical to those reported in Pseudomonas resinovorans CA10. Burkholderia IMP5GC efficiently degraded carbazole in aqueous media as well as in biphasic media with n-hexadecane. Furthermore, the strain IMPGC5 efficiently reduced the concentration of carbazole and monomethyl carbazole species in gas oil-water biphasic media. This study demonstrates the biodegradation of carbazole in biphasic gas oil/water media (1 : 1), regardless of the highly toxic effects of this petroleum distillate. Biodegradation of carbazole in biphasic media contributes to the understanding and design of bioprocesses for carbazole removal from petroleum-upgrading fractions and other carbazole-rich organic mixtures.</description><subject>Alkanes - metabolism</subject><subject>bacteria</subject><subject>biodegradation</subject><subject>Biodegradation, Environmental</subject><subject>biodenitrogenation</subject><subject>biodesulfurization</subject><subject>Biological and medical sciences</subject><subject>biphasic media</subject><subject>Burkholderia</subject><subject>Burkholderia - drug effects</subject><subject>Burkholderia - genetics</subject><subject>Burkholderia - metabolism</subject><subject>car genes</subject><subject>carbazole</subject><subject>Carbazoles - metabolism</subject><subject>Carbazoles - pharmacology</subject><subject>carbon</subject><subject>Carbon-Nitrogen Ligases - genetics</subject><subject>Carcinogens, Environmental - metabolism</subject><subject>Carcinogens, Environmental - pharmacology</subject><subject>Culture Media</subject><subject>Freshwater</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gasoline</subject><subject>genes</subject><subject>Genes, Bacterial - genetics</subject><subject>hexadecane</subject><subject>hot springs</subject><subject>Microbiology</subject><subject>nitrogen</subject><subject>oils</subject><subject>Petroleum</subject><subject>Pseudomonas</subject><subject>Pseudomonas resinovorans</subject><subject>Temperature</subject><subject>toxicity</subject><subject>Water Microbiology</subject><issn>1364-5072</issn><issn>1365-2672</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkktv1DAQxy1ERR_wFcBCgltSP-IkPnAoK-hDrUCCnq3xI1sv2Xhrb7Tdfnqc7opKPeGLx5rff2Y0fyOEKSlpPqeLkvJaFKxuWMkIESVhjZTlwyt09C_x-imuCkEadoiOU1oQQjkR9Rt0SGsheMPaI5RmEDU8ht5h7YN18wgW1j4M2A94DgkH359uYO1izq_uIHmDl856wHqLAQ9ug30KfQYs1mAy58cl_jrGP3eht_kFOK1KnNYRcsHLm5_ifPYWHXTQJ_duf5-g2-_ffs8uiusf55ezs-vCiErIgmtnaKNNa7mDDrgjLSOsknWtwVZSOqs116IijpuG2c5aB5XTnZXWUMs1P0Gfd3VXMdyPLq3V0ifj-h4GF8akqGwrSuoqgx9fgIswxiHPphhnshJCNBlqd5CJIaXoOrWKfglxqyhRkytqoablq2n5anJFPbmiHrL0_b7-qPPynoV7GzLwaQ9AMtB3EQbj0zPXCCkoEZn7suM2vnfb_x5AXZ3dTFHWf9jpOwgK5jH3uP3FCBX5a5DcQ_K_wSCymw</recordid><startdate>200604</startdate><enddate>200604</enddate><creator>Castorena, G</creator><creator>Mugica, V</creator><creator>Le Borgne, S</creator><creator>Acuña, M.E</creator><creator>Bustos-Jaimes, I</creator><creator>Aburto, J</creator><general>Blackwell Publishing Ltd</general><general>Blackwell Science</general><general>Oxford University Press</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7T7</scope><scope>7TM</scope><scope>7U7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7TV</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope></search><sort><creationdate>200604</creationdate><title>Carbazole biodegradation in gas oil/water biphasic media by a new isolated bacterium Burkholderia sp. strain IMP5GC</title><author>Castorena, G ; Mugica, V ; Le Borgne, S ; Acuña, M.E ; Bustos-Jaimes, I ; Aburto, J</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5459-3bec17bc8d3eafa3e082024966bad499edbb3b540e3c72dfddea4ebfd9dc1d3b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Alkanes - metabolism</topic><topic>bacteria</topic><topic>biodegradation</topic><topic>Biodegradation, Environmental</topic><topic>biodenitrogenation</topic><topic>biodesulfurization</topic><topic>Biological and medical sciences</topic><topic>biphasic media</topic><topic>Burkholderia</topic><topic>Burkholderia - drug effects</topic><topic>Burkholderia - genetics</topic><topic>Burkholderia - metabolism</topic><topic>car genes</topic><topic>carbazole</topic><topic>Carbazoles - metabolism</topic><topic>Carbazoles - pharmacology</topic><topic>carbon</topic><topic>Carbon-Nitrogen Ligases - genetics</topic><topic>Carcinogens, Environmental - metabolism</topic><topic>Carcinogens, Environmental - pharmacology</topic><topic>Culture Media</topic><topic>Freshwater</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gasoline</topic><topic>genes</topic><topic>Genes, Bacterial - genetics</topic><topic>hexadecane</topic><topic>hot springs</topic><topic>Microbiology</topic><topic>nitrogen</topic><topic>oils</topic><topic>Petroleum</topic><topic>Pseudomonas</topic><topic>Pseudomonas resinovorans</topic><topic>Temperature</topic><topic>toxicity</topic><topic>Water Microbiology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Castorena, G</creatorcontrib><creatorcontrib>Mugica, V</creatorcontrib><creatorcontrib>Le Borgne, S</creatorcontrib><creatorcontrib>Acuña, M.E</creatorcontrib><creatorcontrib>Bustos-Jaimes, I</creatorcontrib><creatorcontrib>Aburto, J</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>Pollution Abstracts</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><jtitle>Journal of applied microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Castorena, G</au><au>Mugica, V</au><au>Le Borgne, S</au><au>Acuña, M.E</au><au>Bustos-Jaimes, I</au><au>Aburto, J</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Carbazole biodegradation in gas oil/water biphasic media by a new isolated bacterium Burkholderia sp. strain IMP5GC</atitle><jtitle>Journal of applied microbiology</jtitle><addtitle>J Appl Microbiol</addtitle><date>2006-04</date><risdate>2006</risdate><volume>100</volume><issue>4</issue><spage>739</spage><epage>745</epage><pages>739-745</pages><issn>1364-5072</issn><eissn>1365-2672</eissn><coden>JAMIFK</coden><abstract>To select carbazole-degrading bacteria able to survive and metabolize carbazole in biphasic organic-water media and to study the factors affecting carbazole degradation in such conditions. In this research a new carbazole-degrading strain was isolated from hot springs in Mexico. This bacterium was preliminary identified as Burkholderia sp. IMP5GC and was able to grow using carbazole as sole carbon and nitrogen source. Genetic analysis showed that this bacterium carries carA genes identical to those reported in Pseudomonas resinovorans CA10. Burkholderia IMP5GC efficiently degraded carbazole in aqueous media as well as in biphasic media with n-hexadecane. Furthermore, the strain IMPGC5 efficiently reduced the concentration of carbazole and monomethyl carbazole species in gas oil-water biphasic media. This study demonstrates the biodegradation of carbazole in biphasic gas oil/water media (1 : 1), regardless of the highly toxic effects of this petroleum distillate. Biodegradation of carbazole in biphasic media contributes to the understanding and design of bioprocesses for carbazole removal from petroleum-upgrading fractions and other carbazole-rich organic mixtures.</abstract><cop>Oxford, UK</cop><pub>Blackwell Publishing Ltd</pub><pmid>16553728</pmid><doi>10.1111/j.1365-2672.2005.02799.x</doi><tpages>7</tpages></addata></record> |
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| ispartof | Journal of applied microbiology, 2006-04, Vol.100 (4), p.739-745 |
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| source | MEDLINE; Access via Wiley Online Library; Oxford University Press Journals All Titles (1996-Current) |
| subjects | Alkanes - metabolism bacteria biodegradation Biodegradation, Environmental biodenitrogenation biodesulfurization Biological and medical sciences biphasic media Burkholderia Burkholderia - drug effects Burkholderia - genetics Burkholderia - metabolism car genes carbazole Carbazoles - metabolism Carbazoles - pharmacology carbon Carbon-Nitrogen Ligases - genetics Carcinogens, Environmental - metabolism Carcinogens, Environmental - pharmacology Culture Media Freshwater Fundamental and applied biological sciences. Psychology Gasoline genes Genes, Bacterial - genetics hexadecane hot springs Microbiology nitrogen oils Petroleum Pseudomonas Pseudomonas resinovorans Temperature toxicity Water Microbiology |
| title | Carbazole biodegradation in gas oil/water biphasic media by a new isolated bacterium Burkholderia sp. strain IMP5GC |
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