Purification, crystallization and preliminary X-ray diffraction analysis of the phage T4 vertex protein gp24 and its mutant forms
The study of bacteriophage T4 assembly has revealed regulatory mechanisms pertinent not only to viruses but also to macromolecular complexes. The capsid of bacteriophage T4 is composed of the major capsid protein gp23, and a minor capsid protein gp24, which is arranged as pentamers at the vertices o...
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creator | Boeshans, Karen M. Liu, Fang Peng, Guihong Idler, William Jang, Shyh-Ing Marekov, Lyuben Black, Lindsay Ahvazi, Bijan |
description | The study of bacteriophage T4 assembly has revealed regulatory mechanisms pertinent not only to viruses but also to macromolecular complexes. The capsid of bacteriophage T4 is composed of the major capsid protein gp23, and a minor capsid protein gp24, which is arranged as pentamers at the vertices of the capsid. In this study the T4 capsid protein gp24 and its mutant forms were overexpressed and purified to homogeneity. The overexpression from plasmid vectors of all the constructs in
Escherichia coli yields biologically active protein
in vivo as determined by assembly of active virus following infection with inactivated gene
24 mutant viruses. The gp24 mutant was subjected to surface entropy reduction by mutagenesis and reductive alkylation in order to improve its crystallization properties and diffraction quality. To determine if surface mutagenesis targeting would result in diffractable crystals, two glutamate to alanine mutations (E89A,E90A) were introduced. We report here the biochemical observations and consequent mutagenesis experiment that resulted in improvements in the stability, crystallizability and crystal quality of gp24 without affecting the overall folding. Rational modification of the protein surface to achieve crystallization appears promising for improving crystallization behavior and crystal diffracting qualities. The crystal of gp24(E89A,E90A) diffracted to 2.6
Å resolution compared to wild-type gp24 at 3.80
Å resolution under the same experimental conditions. Surface mutation proved to be a better method than reductive methylation for improving diffraction quality of the gp24 crystals. |
doi_str_mv | 10.1016/j.pep.2006.05.021 |
format | Article |
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Escherichia coli yields biologically active protein
in vivo as determined by assembly of active virus following infection with inactivated gene
24 mutant viruses. The gp24 mutant was subjected to surface entropy reduction by mutagenesis and reductive alkylation in order to improve its crystallization properties and diffraction quality. To determine if surface mutagenesis targeting would result in diffractable crystals, two glutamate to alanine mutations (E89A,E90A) were introduced. We report here the biochemical observations and consequent mutagenesis experiment that resulted in improvements in the stability, crystallizability and crystal quality of gp24 without affecting the overall folding. Rational modification of the protein surface to achieve crystallization appears promising for improving crystallization behavior and crystal diffracting qualities. The crystal of gp24(E89A,E90A) diffracted to 2.6
Å resolution compared to wild-type gp24 at 3.80
Å resolution under the same experimental conditions. Surface mutation proved to be a better method than reductive methylation for improving diffraction quality of the gp24 crystals.</description><identifier>ISSN: 1046-5928</identifier><identifier>EISSN: 1096-0279</identifier><identifier>DOI: 10.1016/j.pep.2006.05.021</identifier><identifier>PMID: 16884923</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>ALANINES ; ALKYLATION ; Amino Acid Substitution ; Bacteriophage T4 ; BACTERIOPHAGES ; BASIC BIOLOGICAL SCIENCES ; Capsid protein gp24 ; Capsid Proteins - biosynthesis ; Capsid Proteins - chemistry ; Capsid Proteins - genetics ; Capsid Proteins - isolation & purification ; COMPLEXES ; CRYSTALLIZATION ; Crystallography, X-Ray - methods ; CRYSTALS ; DIFFRACTION ; ENTROPY ; ESCHERICHIA COLI ; Escherichia coli - genetics ; GENES ; IN VIVO ; METHYLATION ; MODIFICATIONS ; MUTAGENESIS ; MUTANTS ; Mutation, Missense ; MUTATIONS ; national synchrotron light source ; Phage T4 ; PLASMIDS ; Protein Structure, Tertiary ; PROTEINS ; PURIFICATION ; REDUCTION ; Reductive methylation ; RESOLUTION ; STABILITY ; Surface entropy reduction ; SURFACES ; VECTORS ; Virus Assembly - physiology ; VIRUSES ; X-RAY DIFFRACTION</subject><ispartof>Protein Expression and Purification, 2006-10, Vol.49 (2), p.235-243</ispartof><rights>2006</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c408t-f76be5575e3dbaac4dc869abf21a16188efc91cd28cb5e4042b6c92286e1c0993</citedby><cites>FETCH-LOGICAL-c408t-f76be5575e3dbaac4dc869abf21a16188efc91cd28cb5e4042b6c92286e1c0993</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.pep.2006.05.021$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>315,781,785,886,3551,27929,27930,46000</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16884923$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.osti.gov/biblio/930103$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Boeshans, Karen M.</creatorcontrib><creatorcontrib>Liu, Fang</creatorcontrib><creatorcontrib>Peng, Guihong</creatorcontrib><creatorcontrib>Idler, William</creatorcontrib><creatorcontrib>Jang, Shyh-Ing</creatorcontrib><creatorcontrib>Marekov, Lyuben</creatorcontrib><creatorcontrib>Black, Lindsay</creatorcontrib><creatorcontrib>Ahvazi, Bijan</creatorcontrib><creatorcontrib>Brookhaven National Laboratory (BNL) National Synchrotron Light Source</creatorcontrib><title>Purification, crystallization and preliminary X-ray diffraction analysis of the phage T4 vertex protein gp24 and its mutant forms</title><title>Protein Expression and Purification</title><addtitle>Protein Expr Purif</addtitle><description>The study of bacteriophage T4 assembly has revealed regulatory mechanisms pertinent not only to viruses but also to macromolecular complexes. The capsid of bacteriophage T4 is composed of the major capsid protein gp23, and a minor capsid protein gp24, which is arranged as pentamers at the vertices of the capsid. In this study the T4 capsid protein gp24 and its mutant forms were overexpressed and purified to homogeneity. The overexpression from plasmid vectors of all the constructs in
Escherichia coli yields biologically active protein
in vivo as determined by assembly of active virus following infection with inactivated gene
24 mutant viruses. The gp24 mutant was subjected to surface entropy reduction by mutagenesis and reductive alkylation in order to improve its crystallization properties and diffraction quality. To determine if surface mutagenesis targeting would result in diffractable crystals, two glutamate to alanine mutations (E89A,E90A) were introduced. We report here the biochemical observations and consequent mutagenesis experiment that resulted in improvements in the stability, crystallizability and crystal quality of gp24 without affecting the overall folding. Rational modification of the protein surface to achieve crystallization appears promising for improving crystallization behavior and crystal diffracting qualities. The crystal of gp24(E89A,E90A) diffracted to 2.6
Å resolution compared to wild-type gp24 at 3.80
Å resolution under the same experimental conditions. Surface mutation proved to be a better method than reductive methylation for improving diffraction quality of the gp24 crystals.</description><subject>ALANINES</subject><subject>ALKYLATION</subject><subject>Amino Acid Substitution</subject><subject>Bacteriophage T4</subject><subject>BACTERIOPHAGES</subject><subject>BASIC BIOLOGICAL SCIENCES</subject><subject>Capsid protein gp24</subject><subject>Capsid Proteins - biosynthesis</subject><subject>Capsid Proteins - chemistry</subject><subject>Capsid Proteins - genetics</subject><subject>Capsid Proteins - isolation & purification</subject><subject>COMPLEXES</subject><subject>CRYSTALLIZATION</subject><subject>Crystallography, X-Ray - methods</subject><subject>CRYSTALS</subject><subject>DIFFRACTION</subject><subject>ENTROPY</subject><subject>ESCHERICHIA COLI</subject><subject>Escherichia coli - genetics</subject><subject>GENES</subject><subject>IN VIVO</subject><subject>METHYLATION</subject><subject>MODIFICATIONS</subject><subject>MUTAGENESIS</subject><subject>MUTANTS</subject><subject>Mutation, Missense</subject><subject>MUTATIONS</subject><subject>national synchrotron light source</subject><subject>Phage T4</subject><subject>PLASMIDS</subject><subject>Protein Structure, Tertiary</subject><subject>PROTEINS</subject><subject>PURIFICATION</subject><subject>REDUCTION</subject><subject>Reductive methylation</subject><subject>RESOLUTION</subject><subject>STABILITY</subject><subject>Surface entropy reduction</subject><subject>SURFACES</subject><subject>VECTORS</subject><subject>Virus Assembly - physiology</subject><subject>VIRUSES</subject><subject>X-RAY DIFFRACTION</subject><issn>1046-5928</issn><issn>1096-0279</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kU1rFTEYhYNY7If-ADcSN64645vMTG6Cq1JaFQq6qOAuZDJvenOZL5NM8brrPzfTe8Gdq7yE5xwO5xDylkHJgImPu3LGueQAooSmBM5ekDMGShTAN-rleteiaBSXp-Q8xh0AYwKaV-SUCSlrxasz8vR9Cd55a5Kfxktqwz4m0_f-z_MHNWNH54C9H_xowp7-LILZ0847F4w9EqbfRx_p5GjaIp235gHpfU0fMST8ndVTQj_Sh5nXz3Y-RTosyYyJuikM8TU5caaP-Ob4XpAftzf311-Ku2-fv15f3RW2BpkKtxEtNs2mwaprjbF1Z6VQpnWcGSaYlOisYrbj0rYN1lDzVljFuRTILChVXZD3B98pJq-j9Qnt1k7jiDZpVQGDKjMfDkxO_WvBmPTgo8W-NyNOS9RMyVwp8AyyA2jDFGNAp-fgh9yQZqDXbfRO5230uo2GRudtsubd0XxpB-z-KY5jZODTAcBcw6PHsKbE0WLnwxqym_x_7P8CuKWhVA</recordid><startdate>20061001</startdate><enddate>20061001</enddate><creator>Boeshans, Karen M.</creator><creator>Liu, Fang</creator><creator>Peng, Guihong</creator><creator>Idler, William</creator><creator>Jang, Shyh-Ing</creator><creator>Marekov, Lyuben</creator><creator>Black, Lindsay</creator><creator>Ahvazi, Bijan</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7T7</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>OTOTI</scope></search><sort><creationdate>20061001</creationdate><title>Purification, crystallization and preliminary X-ray diffraction analysis of the phage T4 vertex protein gp24 and its mutant forms</title><author>Boeshans, Karen M. ; Liu, Fang ; Peng, Guihong ; Idler, William ; Jang, Shyh-Ing ; Marekov, Lyuben ; Black, Lindsay ; Ahvazi, Bijan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c408t-f76be5575e3dbaac4dc869abf21a16188efc91cd28cb5e4042b6c92286e1c0993</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>ALANINES</topic><topic>ALKYLATION</topic><topic>Amino Acid Substitution</topic><topic>Bacteriophage T4</topic><topic>BACTERIOPHAGES</topic><topic>BASIC BIOLOGICAL SCIENCES</topic><topic>Capsid protein gp24</topic><topic>Capsid Proteins - biosynthesis</topic><topic>Capsid Proteins - chemistry</topic><topic>Capsid Proteins - genetics</topic><topic>Capsid Proteins - isolation & purification</topic><topic>COMPLEXES</topic><topic>CRYSTALLIZATION</topic><topic>Crystallography, X-Ray - methods</topic><topic>CRYSTALS</topic><topic>DIFFRACTION</topic><topic>ENTROPY</topic><topic>ESCHERICHIA COLI</topic><topic>Escherichia coli - genetics</topic><topic>GENES</topic><topic>IN VIVO</topic><topic>METHYLATION</topic><topic>MODIFICATIONS</topic><topic>MUTAGENESIS</topic><topic>MUTANTS</topic><topic>Mutation, Missense</topic><topic>MUTATIONS</topic><topic>national synchrotron light source</topic><topic>Phage T4</topic><topic>PLASMIDS</topic><topic>Protein Structure, Tertiary</topic><topic>PROTEINS</topic><topic>PURIFICATION</topic><topic>REDUCTION</topic><topic>Reductive methylation</topic><topic>RESOLUTION</topic><topic>STABILITY</topic><topic>Surface entropy reduction</topic><topic>SURFACES</topic><topic>VECTORS</topic><topic>Virus Assembly - physiology</topic><topic>VIRUSES</topic><topic>X-RAY DIFFRACTION</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Boeshans, Karen M.</creatorcontrib><creatorcontrib>Liu, Fang</creatorcontrib><creatorcontrib>Peng, Guihong</creatorcontrib><creatorcontrib>Idler, William</creatorcontrib><creatorcontrib>Jang, Shyh-Ing</creatorcontrib><creatorcontrib>Marekov, Lyuben</creatorcontrib><creatorcontrib>Black, Lindsay</creatorcontrib><creatorcontrib>Ahvazi, Bijan</creatorcontrib><creatorcontrib>Brookhaven National Laboratory (BNL) National Synchrotron Light Source</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>OSTI.GOV</collection><jtitle>Protein Expression and Purification</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Boeshans, Karen M.</au><au>Liu, Fang</au><au>Peng, Guihong</au><au>Idler, William</au><au>Jang, Shyh-Ing</au><au>Marekov, Lyuben</au><au>Black, Lindsay</au><au>Ahvazi, Bijan</au><aucorp>Brookhaven National Laboratory (BNL) National Synchrotron Light Source</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Purification, crystallization and preliminary X-ray diffraction analysis of the phage T4 vertex protein gp24 and its mutant forms</atitle><jtitle>Protein Expression and Purification</jtitle><addtitle>Protein Expr Purif</addtitle><date>2006-10-01</date><risdate>2006</risdate><volume>49</volume><issue>2</issue><spage>235</spage><epage>243</epage><pages>235-243</pages><issn>1046-5928</issn><eissn>1096-0279</eissn><abstract>The study of bacteriophage T4 assembly has revealed regulatory mechanisms pertinent not only to viruses but also to macromolecular complexes. The capsid of bacteriophage T4 is composed of the major capsid protein gp23, and a minor capsid protein gp24, which is arranged as pentamers at the vertices of the capsid. In this study the T4 capsid protein gp24 and its mutant forms were overexpressed and purified to homogeneity. The overexpression from plasmid vectors of all the constructs in
Escherichia coli yields biologically active protein
in vivo as determined by assembly of active virus following infection with inactivated gene
24 mutant viruses. The gp24 mutant was subjected to surface entropy reduction by mutagenesis and reductive alkylation in order to improve its crystallization properties and diffraction quality. To determine if surface mutagenesis targeting would result in diffractable crystals, two glutamate to alanine mutations (E89A,E90A) were introduced. We report here the biochemical observations and consequent mutagenesis experiment that resulted in improvements in the stability, crystallizability and crystal quality of gp24 without affecting the overall folding. Rational modification of the protein surface to achieve crystallization appears promising for improving crystallization behavior and crystal diffracting qualities. The crystal of gp24(E89A,E90A) diffracted to 2.6
Å resolution compared to wild-type gp24 at 3.80
Å resolution under the same experimental conditions. Surface mutation proved to be a better method than reductive methylation for improving diffraction quality of the gp24 crystals.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>16884923</pmid><doi>10.1016/j.pep.2006.05.021</doi><tpages>9</tpages></addata></record> |
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subjects | ALANINES ALKYLATION Amino Acid Substitution Bacteriophage T4 BACTERIOPHAGES BASIC BIOLOGICAL SCIENCES Capsid protein gp24 Capsid Proteins - biosynthesis Capsid Proteins - chemistry Capsid Proteins - genetics Capsid Proteins - isolation & purification COMPLEXES CRYSTALLIZATION Crystallography, X-Ray - methods CRYSTALS DIFFRACTION ENTROPY ESCHERICHIA COLI Escherichia coli - genetics GENES IN VIVO METHYLATION MODIFICATIONS MUTAGENESIS MUTANTS Mutation, Missense MUTATIONS national synchrotron light source Phage T4 PLASMIDS Protein Structure, Tertiary PROTEINS PURIFICATION REDUCTION Reductive methylation RESOLUTION STABILITY Surface entropy reduction SURFACES VECTORS Virus Assembly - physiology VIRUSES X-RAY DIFFRACTION |
title | Purification, crystallization and preliminary X-ray diffraction analysis of the phage T4 vertex protein gp24 and its mutant forms |
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