Amino Acids Critical for Substrate Affinity of Rat Organic Cation Transporter 1 Line the Substrate Binding Region in a Model Derived from the Tertiary Structure of Lactose Permease
To identify functionally relevant amino acids in the rat organic cation transporter 1 (rOCT1), 18 consecutive amino acids in the presumed fourth transmembrane α helix (TMH) were mutated and functionally characterized after expression in Xenopus laevis oocytes. After mutation of three amino acids on...
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creator | Popp, Christian Gorboulev, Valentin Müller, Thomas D. Gorbunov, Dmitry Shatskaya, Natalia Koepsell, Hermann |
description | To identify functionally relevant amino acids in the rat organic cation transporter 1 (rOCT1), 18 consecutive amino acids
in the presumed fourth transmembrane α helix (TMH) were mutated and functionally characterized after expression in Xenopus laevis oocytes. After mutation of three amino acids on successive turns of the α helix, K m values for tetraethylammonium (TEA) and/or 1-methyl-4-phenylpyridinium (MPP) were decreased. After replacement of Trp218
by tyrosine (W218Y) and Tyr222 by leucine (Y222L), the K m values for both TEA and MPP were decreased. In mutants Y222F and T226A, only the K m values for TEA and MPP were decreased, respectively. The data suggest that amino acids Trp218 and Tyr222 participate in the
binding of both TEA and MPP, whereas Thr226 is only involved in the binding of MPP. Using the crystal structure of the lactose
permease LacY from Escherichia coli that belongs to the same major facilitator superfamily as rOCT1, we modeled the tertiary structure of the presumed 12 transmembrane
α helices. The validity of the model was suggested because seven amino acids that have been shown to participate in the binding
of cations by mutagenesis experiments [fourth TMH Trp218, Tyr222, and Thr226 (this work); 10th TMH Ala443, Leu447, and Gln448
(companion work in this issue of Molecular Pharmacology ); 11th TMH Asp475 (previous report)] are located in one region surrounding a large cleft that opens to the intracellular
side. The dimensions of TEA in comparison with the interacting amino acids in the modeled cleft suggest that more than one
TEA molecule can bind in parallel to the modeled conformation of the transporter. |
doi_str_mv | 10.1124/mol.104.008839 |
format | Article |
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in the presumed fourth transmembrane α helix (TMH) were mutated and functionally characterized after expression in Xenopus laevis oocytes. After mutation of three amino acids on successive turns of the α helix, K m values for tetraethylammonium (TEA) and/or 1-methyl-4-phenylpyridinium (MPP) were decreased. After replacement of Trp218
by tyrosine (W218Y) and Tyr222 by leucine (Y222L), the K m values for both TEA and MPP were decreased. In mutants Y222F and T226A, only the K m values for TEA and MPP were decreased, respectively. The data suggest that amino acids Trp218 and Tyr222 participate in the
binding of both TEA and MPP, whereas Thr226 is only involved in the binding of MPP. Using the crystal structure of the lactose
permease LacY from Escherichia coli that belongs to the same major facilitator superfamily as rOCT1, we modeled the tertiary structure of the presumed 12 transmembrane
α helices. The validity of the model was suggested because seven amino acids that have been shown to participate in the binding
of cations by mutagenesis experiments [fourth TMH Trp218, Tyr222, and Thr226 (this work); 10th TMH Ala443, Leu447, and Gln448
(companion work in this issue of Molecular Pharmacology ); 11th TMH Asp475 (previous report)] are located in one region surrounding a large cleft that opens to the intracellular
side. The dimensions of TEA in comparison with the interacting amino acids in the modeled cleft suggest that more than one
TEA molecule can bind in parallel to the modeled conformation of the transporter.</description><identifier>ISSN: 0026-895X</identifier><identifier>EISSN: 1521-0111</identifier><identifier>DOI: 10.1124/mol.104.008839</identifier><identifier>PMID: 15662044</identifier><language>eng</language><publisher>United States: American Society for Pharmacology and Experimental Therapeutics</publisher><subject>Amino Acid Sequence ; Amino Acids - chemistry ; Amino Acids - metabolism ; Animals ; Escherichia coli ; Female ; Membrane Transport Proteins - chemistry ; Membrane Transport Proteins - metabolism ; Models, Molecular ; Molecular Sequence Data ; Organic Anion Transport Protein 1 - chemistry ; Organic Anion Transport Protein 1 - metabolism ; Protein Structure, Tertiary - physiology ; Substrate Specificity - physiology ; Xenopus laevis</subject><ispartof>Molecular pharmacology, 2005-05, Vol.67 (5), p.1600-1611</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c421t-a4caabb246064222cd47d7a717f14ac729016d536486ee54c6d295d5dcb6c4a33</citedby><cites>FETCH-LOGICAL-c421t-a4caabb246064222cd47d7a717f14ac729016d536486ee54c6d295d5dcb6c4a33</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>315,782,786,27933,27934</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15662044$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Popp, Christian</creatorcontrib><creatorcontrib>Gorboulev, Valentin</creatorcontrib><creatorcontrib>Müller, Thomas D.</creatorcontrib><creatorcontrib>Gorbunov, Dmitry</creatorcontrib><creatorcontrib>Shatskaya, Natalia</creatorcontrib><creatorcontrib>Koepsell, Hermann</creatorcontrib><title>Amino Acids Critical for Substrate Affinity of Rat Organic Cation Transporter 1 Line the Substrate Binding Region in a Model Derived from the Tertiary Structure of Lactose Permease</title><title>Molecular pharmacology</title><addtitle>Mol Pharmacol</addtitle><description>To identify functionally relevant amino acids in the rat organic cation transporter 1 (rOCT1), 18 consecutive amino acids
in the presumed fourth transmembrane α helix (TMH) were mutated and functionally characterized after expression in Xenopus laevis oocytes. After mutation of three amino acids on successive turns of the α helix, K m values for tetraethylammonium (TEA) and/or 1-methyl-4-phenylpyridinium (MPP) were decreased. After replacement of Trp218
by tyrosine (W218Y) and Tyr222 by leucine (Y222L), the K m values for both TEA and MPP were decreased. In mutants Y222F and T226A, only the K m values for TEA and MPP were decreased, respectively. The data suggest that amino acids Trp218 and Tyr222 participate in the
binding of both TEA and MPP, whereas Thr226 is only involved in the binding of MPP. Using the crystal structure of the lactose
permease LacY from Escherichia coli that belongs to the same major facilitator superfamily as rOCT1, we modeled the tertiary structure of the presumed 12 transmembrane
α helices. The validity of the model was suggested because seven amino acids that have been shown to participate in the binding
of cations by mutagenesis experiments [fourth TMH Trp218, Tyr222, and Thr226 (this work); 10th TMH Ala443, Leu447, and Gln448
(companion work in this issue of Molecular Pharmacology ); 11th TMH Asp475 (previous report)] are located in one region surrounding a large cleft that opens to the intracellular
side. The dimensions of TEA in comparison with the interacting amino acids in the modeled cleft suggest that more than one
TEA molecule can bind in parallel to the modeled conformation of the transporter.</description><subject>Amino Acid Sequence</subject><subject>Amino Acids - chemistry</subject><subject>Amino Acids - metabolism</subject><subject>Animals</subject><subject>Escherichia coli</subject><subject>Female</subject><subject>Membrane Transport Proteins - chemistry</subject><subject>Membrane Transport Proteins - metabolism</subject><subject>Models, Molecular</subject><subject>Molecular Sequence Data</subject><subject>Organic Anion Transport Protein 1 - chemistry</subject><subject>Organic Anion Transport Protein 1 - metabolism</subject><subject>Protein Structure, Tertiary - physiology</subject><subject>Substrate Specificity - physiology</subject><subject>Xenopus laevis</subject><issn>0026-895X</issn><issn>1521-0111</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpNkUGP0zAQhS0EYsvClSPyiVuK7ThOciwFFqSiRbtF4mZN7ElrlNjFdkD9X_sDSWml5TRz-N57mnmEvOZsybmQ78YwLDmTS8aapmyfkAWvBC8Y5_wpWTAmVNG01Y8r8iKln4xxWTXsObnilVKCSbkgD6vR-UBXxtlE19FlZ2CgfYj0fupSjpCRrvreeZePNPT0DjK9jTvwztA1ZBc83Ubw6RBixkg53TiPNO_xP_17563zO3qHuxPvPAX6NVgc6AeM7jda2scw_hNtMWYH8Ujvc5xMniKeQjdgckhIv2EcERK-JM96GBK-usxr8v3Tx-36c7G5vfmyXm0KIwXPBUgD0HVCKqakEMJYWdsaal73XIKpRcu4slWpZKMQK2mUFW1lK2s6ZSSU5TV5e_Y9xPBrwpT16JLBYQCPYUqat7Wany9ncHkGTQwpRez1IbpxvkNzpk896bmneZf63NMseHNxnroR7SN-KeYxeu92-z8uoj7sIY5gwhB2R61qXWmuGCv_AmiCnfM</recordid><startdate>20050501</startdate><enddate>20050501</enddate><creator>Popp, Christian</creator><creator>Gorboulev, Valentin</creator><creator>Müller, Thomas D.</creator><creator>Gorbunov, Dmitry</creator><creator>Shatskaya, Natalia</creator><creator>Koepsell, Hermann</creator><general>American Society for Pharmacology and Experimental Therapeutics</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope></search><sort><creationdate>20050501</creationdate><title>Amino Acids Critical for Substrate Affinity of Rat Organic Cation Transporter 1 Line the Substrate Binding Region in a Model Derived from the Tertiary Structure of Lactose Permease</title><author>Popp, Christian ; Gorboulev, Valentin ; Müller, Thomas D. ; Gorbunov, Dmitry ; Shatskaya, Natalia ; Koepsell, Hermann</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c421t-a4caabb246064222cd47d7a717f14ac729016d536486ee54c6d295d5dcb6c4a33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Amino Acid Sequence</topic><topic>Amino Acids - chemistry</topic><topic>Amino Acids - metabolism</topic><topic>Animals</topic><topic>Escherichia coli</topic><topic>Female</topic><topic>Membrane Transport Proteins - chemistry</topic><topic>Membrane Transport Proteins - metabolism</topic><topic>Models, Molecular</topic><topic>Molecular Sequence Data</topic><topic>Organic Anion Transport Protein 1 - chemistry</topic><topic>Organic Anion Transport Protein 1 - metabolism</topic><topic>Protein Structure, Tertiary - physiology</topic><topic>Substrate Specificity - physiology</topic><topic>Xenopus laevis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Popp, Christian</creatorcontrib><creatorcontrib>Gorboulev, Valentin</creatorcontrib><creatorcontrib>Müller, Thomas D.</creatorcontrib><creatorcontrib>Gorbunov, Dmitry</creatorcontrib><creatorcontrib>Shatskaya, Natalia</creatorcontrib><creatorcontrib>Koepsell, Hermann</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><jtitle>Molecular pharmacology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Popp, Christian</au><au>Gorboulev, Valentin</au><au>Müller, Thomas D.</au><au>Gorbunov, Dmitry</au><au>Shatskaya, Natalia</au><au>Koepsell, Hermann</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Amino Acids Critical for Substrate Affinity of Rat Organic Cation Transporter 1 Line the Substrate Binding Region in a Model Derived from the Tertiary Structure of Lactose Permease</atitle><jtitle>Molecular pharmacology</jtitle><addtitle>Mol Pharmacol</addtitle><date>2005-05-01</date><risdate>2005</risdate><volume>67</volume><issue>5</issue><spage>1600</spage><epage>1611</epage><pages>1600-1611</pages><issn>0026-895X</issn><eissn>1521-0111</eissn><abstract>To identify functionally relevant amino acids in the rat organic cation transporter 1 (rOCT1), 18 consecutive amino acids
in the presumed fourth transmembrane α helix (TMH) were mutated and functionally characterized after expression in Xenopus laevis oocytes. After mutation of three amino acids on successive turns of the α helix, K m values for tetraethylammonium (TEA) and/or 1-methyl-4-phenylpyridinium (MPP) were decreased. After replacement of Trp218
by tyrosine (W218Y) and Tyr222 by leucine (Y222L), the K m values for both TEA and MPP were decreased. In mutants Y222F and T226A, only the K m values for TEA and MPP were decreased, respectively. The data suggest that amino acids Trp218 and Tyr222 participate in the
binding of both TEA and MPP, whereas Thr226 is only involved in the binding of MPP. Using the crystal structure of the lactose
permease LacY from Escherichia coli that belongs to the same major facilitator superfamily as rOCT1, we modeled the tertiary structure of the presumed 12 transmembrane
α helices. The validity of the model was suggested because seven amino acids that have been shown to participate in the binding
of cations by mutagenesis experiments [fourth TMH Trp218, Tyr222, and Thr226 (this work); 10th TMH Ala443, Leu447, and Gln448
(companion work in this issue of Molecular Pharmacology ); 11th TMH Asp475 (previous report)] are located in one region surrounding a large cleft that opens to the intracellular
side. The dimensions of TEA in comparison with the interacting amino acids in the modeled cleft suggest that more than one
TEA molecule can bind in parallel to the modeled conformation of the transporter.</abstract><cop>United States</cop><pub>American Society for Pharmacology and Experimental Therapeutics</pub><pmid>15662044</pmid><doi>10.1124/mol.104.008839</doi><tpages>12</tpages></addata></record> |
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subjects | Amino Acid Sequence Amino Acids - chemistry Amino Acids - metabolism Animals Escherichia coli Female Membrane Transport Proteins - chemistry Membrane Transport Proteins - metabolism Models, Molecular Molecular Sequence Data Organic Anion Transport Protein 1 - chemistry Organic Anion Transport Protein 1 - metabolism Protein Structure, Tertiary - physiology Substrate Specificity - physiology Xenopus laevis |
title | Amino Acids Critical for Substrate Affinity of Rat Organic Cation Transporter 1 Line the Substrate Binding Region in a Model Derived from the Tertiary Structure of Lactose Permease |
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