Haplotype analysis of the germacrene A synthase gene and association with cynaropicrin content and biological activities in Cynara cardunculus

Cynara cardunculus : L. represents a natural source of terpenic compounds, with the predominant molecule being cynaropicrin. Cynaropicrin is gaining interest since it has been correlated to anti-hyperlipidaemia, antispasmodic and cytotoxicity activity against leukocyte cancer cells. The objective of...

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Veröffentlicht in:Molecular genetics and genomics : MGG 2018-04, Vol.293 (2), p.417-433
Hauptverfasser: Ferro, Ana Margarida, Ramos, Patrícia, Guerra, Ângela, Parreira, Paula, Brás, Teresa, Guerreiro, Olinda, Jerónimo, Eliana, Capel, Carmen, Capel, Juan, Yuste-Lisbona, Fernando J., Duarte, Maria F., Lozano, Rafael, Oliveira, M. Margarida, Gonçalves, Sónia
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container_issue 2
container_start_page 417
container_title Molecular genetics and genomics : MGG
container_volume 293
creator Ferro, Ana Margarida
Ramos, Patrícia
Guerra, Ângela
Parreira, Paula
Brás, Teresa
Guerreiro, Olinda
Jerónimo, Eliana
Capel, Carmen
Capel, Juan
Yuste-Lisbona, Fernando J.
Duarte, Maria F.
Lozano, Rafael
Oliveira, M. Margarida
Gonçalves, Sónia
description Cynara cardunculus : L. represents a natural source of terpenic compounds, with the predominant molecule being cynaropicrin. Cynaropicrin is gaining interest since it has been correlated to anti-hyperlipidaemia, antispasmodic and cytotoxicity activity against leukocyte cancer cells. The objective of this work was to screen a collection of C. cardunculus , from different origins, for new allelic variants in germacrene A synthase ( GAS ) gene involved in the cynaropicrin biosynthesis and correlate them with improved cynaropicrin content and biological activities. Using high-resolution melting, nine haplotypes were identified. The putative impact of the identified allelic variants in GAS protein was evaluated by bioinformatic tools and polymorphisms that putatively lead to protein conformational changes were described. Additionally, cynaropicrin and main pentacyclic triterpenes contents, and antithrombin, antimicrobial and antiproliferative activities were also determined in C. cardunculus leaf lipophilic-derived extracts. In this work we identified allelic variants with putative impact on GAS protein, which are significantly associated with cynaropicrin content and antiproliferative activity. The results obtained suggest that the identified polymorphisms should be explored as putative genetic markers correlated with biological properties in Cynara cardunculus .
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Margarida</creatorcontrib><creatorcontrib>Gonçalves, Sónia</creatorcontrib><title>Haplotype analysis of the germacrene A synthase gene and association with cynaropicrin content and biological activities in Cynara cardunculus</title><title>Molecular genetics and genomics : MGG</title><addtitle>Mol Genet Genomics</addtitle><addtitle>Mol Genet Genomics</addtitle><description>Cynara cardunculus : L. represents a natural source of terpenic compounds, with the predominant molecule being cynaropicrin. Cynaropicrin is gaining interest since it has been correlated to anti-hyperlipidaemia, antispasmodic and cytotoxicity activity against leukocyte cancer cells. The objective of this work was to screen a collection of C. cardunculus , from different origins, for new allelic variants in germacrene A synthase ( GAS ) gene involved in the cynaropicrin biosynthesis and correlate them with improved cynaropicrin content and biological activities. Using high-resolution melting, nine haplotypes were identified. The putative impact of the identified allelic variants in GAS protein was evaluated by bioinformatic tools and polymorphisms that putatively lead to protein conformational changes were described. Additionally, cynaropicrin and main pentacyclic triterpenes contents, and antithrombin, antimicrobial and antiproliferative activities were also determined in C. cardunculus leaf lipophilic-derived extracts. In this work we identified allelic variants with putative impact on GAS protein, which are significantly associated with cynaropicrin content and antiproliferative activity. 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The objective of this work was to screen a collection of C. cardunculus , from different origins, for new allelic variants in germacrene A synthase ( GAS ) gene involved in the cynaropicrin biosynthesis and correlate them with improved cynaropicrin content and biological activities. Using high-resolution melting, nine haplotypes were identified. The putative impact of the identified allelic variants in GAS protein was evaluated by bioinformatic tools and polymorphisms that putatively lead to protein conformational changes were described. Additionally, cynaropicrin and main pentacyclic triterpenes contents, and antithrombin, antimicrobial and antiproliferative activities were also determined in C. cardunculus leaf lipophilic-derived extracts. In this work we identified allelic variants with putative impact on GAS protein, which are significantly associated with cynaropicrin content and antiproliferative activity. The results obtained suggest that the identified polymorphisms should be explored as putative genetic markers correlated with biological properties in Cynara cardunculus .</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>29143866</pmid><doi>10.1007/s00438-017-1388-z</doi><tpages>17</tpages></addata></record>
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subjects Animal Genetics and Genomics
Antithrombin
Biochemistry
Biomarkers
Biomedical and Life Sciences
Cancer
Cynara cardunculus
Cytotoxicity
Genetic markers
Germacrene
Haplotypes
Human Genetics
Hyperlipidemia
Life Sciences
Lipophilic
Microbial Genetics and Genomics
Muscle relaxants
Original Article
Parasympathetic nervous system
Plant Genetics and Genomics
Proteins
Terpenic compounds
Triterpenes
title Haplotype analysis of the germacrene A synthase gene and association with cynaropicrin content and biological activities in Cynara cardunculus
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