Fictibacillus aquaticus sp. nov., isolated from downstream river water
A Gram-stain-positive, facultatively anaerobic bacterial strain, GDSW-R2A3 , was isolated from a downstream water sample collected from the river Ganges, India. Analysis of the 16S rRNA gene sequence of strain GDSW-R2A3 revealed its affiliation to the family Bacillaceae. Further analysis using a pol...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2018-01, Vol.68 (1), p.160-164 |
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| container_title | International journal of systematic and evolutionary microbiology |
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| creator | Pal, Deepika Bhardwaj, Ayanka Kaur, Navjot Sudan, Sarabjeet Kour Bisht, Bhawana Kumari, Munesh Vyas, Bhawna Krishnamurthi, Srinivasan Mayilraj, Shanmugam |
| description | A Gram-stain-positive, facultatively anaerobic bacterial strain, GDSW-R2A3
, was isolated from a downstream water sample collected from the river Ganges, India. Analysis of the 16S rRNA gene sequence of strain GDSW-R2A3
revealed its affiliation to the family Bacillaceae. Further analysis using a polyphasic approach revealed that strain GDSW-R2A3
was most closely related to the genus Fictibacillus. Analysis of the almost-complete (1488 bp) 16S rRNA gene sequence of strain GDSW-R2A3
revealed the highest level of sequence similarity with Fictibacillus phosphorivorans CCM 8426
(98.3 %) and Fictibacillus nanhaiensis KCTC 13712
(98.3 %) followed by Fictibacillus barbaricus DSM 14730
(98.0 %). The digital DNA-DNA hybridization and average nucleotide identity (ANI) values between strain GDSW-R2A3
and the most closely related taxon, F. phosphorivorans CCM 8426
, were 20.3 and 78.2 %, respectively. The DNA G+C content of the strain was 44.2 mol%. The cell-wall amino acid was meso-diaminopimelic acid. Polar lipids present were phosphatidylglycerol, phosphatidylethanolamine, diphosphatidylglycerol, three aminophospholipids, two phospholipids and one unidentified lipid; the major menaquinone was MK-7; iso-C14 : 0, iso-C15 : 0 and anteiso-C15 : 0 were the major fatty acids. On the basis of the phenotypic, chemotaxonomic and phylogenetic data, it can be concluded that strain GDSW-R2A3
represents a novel species of the genus Fictibacillus, for which the name Fictibacillus aquaticus sp. nov. is proposed. The type strain is GDSW-R2A3
(=VTCC-B-910015
=CCM 8782
). |
| doi_str_mv | 10.1099/ijsem.0.002474 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1961863111</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1961863111</sourcerecordid><originalsourceid>FETCH-LOGICAL-c335t-42b36e272bd991466d9770e383adda1f61e9c6e9e9c33ca2cde89b25e868db343</originalsourceid><addsrcrecordid>eNo9kM1PwzAMxSMEYmNw5Yh65ECL87G0OaKJAdIkLnCO0sSVMrXrlrSb-O_p6NjFfrKfn6wfIfcUMgpKPft1xCaDDICJXFyQKRVSpnPg4vKsmZyQmxjXAMMA4JpMmKJUgoApWS697XxprK_rPiZm15vO20HFbZZs2n32lPjY1qZDl1ShbRLXHjaxC2iaJPg9huQw7MItuapMHfHu1Gfke_n6tXhPV59vH4uXVWo5n3epYCWXyHJWOqWO3zmV54C84MY5QytJUVmJaqicW8Osw0KVbI6FLFzJBZ-RxzF3G9pdj7HTjY8W69pssO2jpkrSQnJK6WDNRqsNbYwBK70NvjHhR1PQR3b6j50GPbIbDh5O2X3ZoDvb_2HxX43zaw8</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1961863111</pqid></control><display><type>article</type><title>Fictibacillus aquaticus sp. nov., isolated from downstream river water</title><source>MEDLINE</source><source>Microbiology Society</source><source>EZB-FREE-00999 freely available EZB journals</source><source>Alma/SFX Local Collection</source><creator>Pal, Deepika ; Bhardwaj, Ayanka ; Kaur, Navjot ; Sudan, Sarabjeet Kour ; Bisht, Bhawana ; Kumari, Munesh ; Vyas, Bhawna ; Krishnamurthi, Srinivasan ; Mayilraj, Shanmugam</creator><creatorcontrib>Pal, Deepika ; Bhardwaj, Ayanka ; Kaur, Navjot ; Sudan, Sarabjeet Kour ; Bisht, Bhawana ; Kumari, Munesh ; Vyas, Bhawna ; Krishnamurthi, Srinivasan ; Mayilraj, Shanmugam</creatorcontrib><description>A Gram-stain-positive, facultatively anaerobic bacterial strain, GDSW-R2A3
, was isolated from a downstream water sample collected from the river Ganges, India. Analysis of the 16S rRNA gene sequence of strain GDSW-R2A3
revealed its affiliation to the family Bacillaceae. Further analysis using a polyphasic approach revealed that strain GDSW-R2A3
was most closely related to the genus Fictibacillus. Analysis of the almost-complete (1488 bp) 16S rRNA gene sequence of strain GDSW-R2A3
revealed the highest level of sequence similarity with Fictibacillus phosphorivorans CCM 8426
(98.3 %) and Fictibacillus nanhaiensis KCTC 13712
(98.3 %) followed by Fictibacillus barbaricus DSM 14730
(98.0 %). The digital DNA-DNA hybridization and average nucleotide identity (ANI) values between strain GDSW-R2A3
and the most closely related taxon, F. phosphorivorans CCM 8426
, were 20.3 and 78.2 %, respectively. The DNA G+C content of the strain was 44.2 mol%. The cell-wall amino acid was meso-diaminopimelic acid. Polar lipids present were phosphatidylglycerol, phosphatidylethanolamine, diphosphatidylglycerol, three aminophospholipids, two phospholipids and one unidentified lipid; the major menaquinone was MK-7; iso-C14 : 0, iso-C15 : 0 and anteiso-C15 : 0 were the major fatty acids. On the basis of the phenotypic, chemotaxonomic and phylogenetic data, it can be concluded that strain GDSW-R2A3
represents a novel species of the genus Fictibacillus, for which the name Fictibacillus aquaticus sp. nov. is proposed. The type strain is GDSW-R2A3
(=VTCC-B-910015
=CCM 8782
).</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijsem.0.002474</identifier><identifier>PMID: 29116040</identifier><language>eng</language><publisher>England</publisher><subject>Bacillaceae - classification ; Bacillaceae - genetics ; Bacillaceae - isolation & purification ; Bacterial Typing Techniques ; Base Composition ; Cell Wall - chemistry ; Diaminopimelic Acid - chemistry ; DNA, Bacterial - genetics ; Fatty Acids - chemistry ; India ; Nucleic Acid Hybridization ; Phospholipids - chemistry ; Phylogeny ; Rivers - microbiology ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Vitamin K 2 - analogs & derivatives ; Vitamin K 2 - chemistry</subject><ispartof>International journal of systematic and evolutionary microbiology, 2018-01, Vol.68 (1), p.160-164</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c335t-42b36e272bd991466d9770e383adda1f61e9c6e9e9c33ca2cde89b25e868db343</citedby><cites>FETCH-LOGICAL-c335t-42b36e272bd991466d9770e383adda1f61e9c6e9e9c33ca2cde89b25e868db343</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,3733,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29116040$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Pal, Deepika</creatorcontrib><creatorcontrib>Bhardwaj, Ayanka</creatorcontrib><creatorcontrib>Kaur, Navjot</creatorcontrib><creatorcontrib>Sudan, Sarabjeet Kour</creatorcontrib><creatorcontrib>Bisht, Bhawana</creatorcontrib><creatorcontrib>Kumari, Munesh</creatorcontrib><creatorcontrib>Vyas, Bhawna</creatorcontrib><creatorcontrib>Krishnamurthi, Srinivasan</creatorcontrib><creatorcontrib>Mayilraj, Shanmugam</creatorcontrib><title>Fictibacillus aquaticus sp. nov., isolated from downstream river water</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>A Gram-stain-positive, facultatively anaerobic bacterial strain, GDSW-R2A3
, was isolated from a downstream water sample collected from the river Ganges, India. Analysis of the 16S rRNA gene sequence of strain GDSW-R2A3
revealed its affiliation to the family Bacillaceae. Further analysis using a polyphasic approach revealed that strain GDSW-R2A3
was most closely related to the genus Fictibacillus. Analysis of the almost-complete (1488 bp) 16S rRNA gene sequence of strain GDSW-R2A3
revealed the highest level of sequence similarity with Fictibacillus phosphorivorans CCM 8426
(98.3 %) and Fictibacillus nanhaiensis KCTC 13712
(98.3 %) followed by Fictibacillus barbaricus DSM 14730
(98.0 %). The digital DNA-DNA hybridization and average nucleotide identity (ANI) values between strain GDSW-R2A3
and the most closely related taxon, F. phosphorivorans CCM 8426
, were 20.3 and 78.2 %, respectively. The DNA G+C content of the strain was 44.2 mol%. The cell-wall amino acid was meso-diaminopimelic acid. Polar lipids present were phosphatidylglycerol, phosphatidylethanolamine, diphosphatidylglycerol, three aminophospholipids, two phospholipids and one unidentified lipid; the major menaquinone was MK-7; iso-C14 : 0, iso-C15 : 0 and anteiso-C15 : 0 were the major fatty acids. On the basis of the phenotypic, chemotaxonomic and phylogenetic data, it can be concluded that strain GDSW-R2A3
represents a novel species of the genus Fictibacillus, for which the name Fictibacillus aquaticus sp. nov. is proposed. The type strain is GDSW-R2A3
(=VTCC-B-910015
=CCM 8782
).</description><subject>Bacillaceae - classification</subject><subject>Bacillaceae - genetics</subject><subject>Bacillaceae - isolation & purification</subject><subject>Bacterial Typing Techniques</subject><subject>Base Composition</subject><subject>Cell Wall - chemistry</subject><subject>Diaminopimelic Acid - chemistry</subject><subject>DNA, Bacterial - genetics</subject><subject>Fatty Acids - chemistry</subject><subject>India</subject><subject>Nucleic Acid Hybridization</subject><subject>Phospholipids - chemistry</subject><subject>Phylogeny</subject><subject>Rivers - microbiology</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Vitamin K 2 - analogs & derivatives</subject><subject>Vitamin K 2 - chemistry</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo9kM1PwzAMxSMEYmNw5Yh65ECL87G0OaKJAdIkLnCO0sSVMrXrlrSb-O_p6NjFfrKfn6wfIfcUMgpKPft1xCaDDICJXFyQKRVSpnPg4vKsmZyQmxjXAMMA4JpMmKJUgoApWS697XxprK_rPiZm15vO20HFbZZs2n32lPjY1qZDl1ShbRLXHjaxC2iaJPg9huQw7MItuapMHfHu1Gfke_n6tXhPV59vH4uXVWo5n3epYCWXyHJWOqWO3zmV54C84MY5QytJUVmJaqicW8Osw0KVbI6FLFzJBZ-RxzF3G9pdj7HTjY8W69pssO2jpkrSQnJK6WDNRqsNbYwBK70NvjHhR1PQR3b6j50GPbIbDh5O2X3ZoDvb_2HxX43zaw8</recordid><startdate>201801</startdate><enddate>201801</enddate><creator>Pal, Deepika</creator><creator>Bhardwaj, Ayanka</creator><creator>Kaur, Navjot</creator><creator>Sudan, Sarabjeet Kour</creator><creator>Bisht, Bhawana</creator><creator>Kumari, Munesh</creator><creator>Vyas, Bhawna</creator><creator>Krishnamurthi, Srinivasan</creator><creator>Mayilraj, Shanmugam</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>201801</creationdate><title>Fictibacillus aquaticus sp. nov., isolated from downstream river water</title><author>Pal, Deepika ; Bhardwaj, Ayanka ; Kaur, Navjot ; Sudan, Sarabjeet Kour ; Bisht, Bhawana ; Kumari, Munesh ; Vyas, Bhawna ; Krishnamurthi, Srinivasan ; Mayilraj, Shanmugam</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c335t-42b36e272bd991466d9770e383adda1f61e9c6e9e9c33ca2cde89b25e868db343</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Bacillaceae - classification</topic><topic>Bacillaceae - genetics</topic><topic>Bacillaceae - isolation & purification</topic><topic>Bacterial Typing Techniques</topic><topic>Base Composition</topic><topic>Cell Wall - chemistry</topic><topic>Diaminopimelic Acid - chemistry</topic><topic>DNA, Bacterial - genetics</topic><topic>Fatty Acids - chemistry</topic><topic>India</topic><topic>Nucleic Acid Hybridization</topic><topic>Phospholipids - chemistry</topic><topic>Phylogeny</topic><topic>Rivers - microbiology</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Vitamin K 2 - analogs & derivatives</topic><topic>Vitamin K 2 - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Pal, Deepika</creatorcontrib><creatorcontrib>Bhardwaj, Ayanka</creatorcontrib><creatorcontrib>Kaur, Navjot</creatorcontrib><creatorcontrib>Sudan, Sarabjeet Kour</creatorcontrib><creatorcontrib>Bisht, Bhawana</creatorcontrib><creatorcontrib>Kumari, Munesh</creatorcontrib><creatorcontrib>Vyas, Bhawna</creatorcontrib><creatorcontrib>Krishnamurthi, Srinivasan</creatorcontrib><creatorcontrib>Mayilraj, Shanmugam</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Pal, Deepika</au><au>Bhardwaj, Ayanka</au><au>Kaur, Navjot</au><au>Sudan, Sarabjeet Kour</au><au>Bisht, Bhawana</au><au>Kumari, Munesh</au><au>Vyas, Bhawna</au><au>Krishnamurthi, Srinivasan</au><au>Mayilraj, Shanmugam</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Fictibacillus aquaticus sp. nov., isolated from downstream river water</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2018-01</date><risdate>2018</risdate><volume>68</volume><issue>1</issue><spage>160</spage><epage>164</epage><pages>160-164</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>A Gram-stain-positive, facultatively anaerobic bacterial strain, GDSW-R2A3
, was isolated from a downstream water sample collected from the river Ganges, India. Analysis of the 16S rRNA gene sequence of strain GDSW-R2A3
revealed its affiliation to the family Bacillaceae. Further analysis using a polyphasic approach revealed that strain GDSW-R2A3
was most closely related to the genus Fictibacillus. Analysis of the almost-complete (1488 bp) 16S rRNA gene sequence of strain GDSW-R2A3
revealed the highest level of sequence similarity with Fictibacillus phosphorivorans CCM 8426
(98.3 %) and Fictibacillus nanhaiensis KCTC 13712
(98.3 %) followed by Fictibacillus barbaricus DSM 14730
(98.0 %). The digital DNA-DNA hybridization and average nucleotide identity (ANI) values between strain GDSW-R2A3
and the most closely related taxon, F. phosphorivorans CCM 8426
, were 20.3 and 78.2 %, respectively. The DNA G+C content of the strain was 44.2 mol%. The cell-wall amino acid was meso-diaminopimelic acid. Polar lipids present were phosphatidylglycerol, phosphatidylethanolamine, diphosphatidylglycerol, three aminophospholipids, two phospholipids and one unidentified lipid; the major menaquinone was MK-7; iso-C14 : 0, iso-C15 : 0 and anteiso-C15 : 0 were the major fatty acids. On the basis of the phenotypic, chemotaxonomic and phylogenetic data, it can be concluded that strain GDSW-R2A3
represents a novel species of the genus Fictibacillus, for which the name Fictibacillus aquaticus sp. nov. is proposed. The type strain is GDSW-R2A3
(=VTCC-B-910015
=CCM 8782
).</abstract><cop>England</cop><pmid>29116040</pmid><doi>10.1099/ijsem.0.002474</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 1466-5026 |
| ispartof | International journal of systematic and evolutionary microbiology, 2018-01, Vol.68 (1), p.160-164 |
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| language | eng |
| recordid | cdi_proquest_miscellaneous_1961863111 |
| source | MEDLINE; Microbiology Society; EZB-FREE-00999 freely available EZB journals; Alma/SFX Local Collection |
| subjects | Bacillaceae - classification Bacillaceae - genetics Bacillaceae - isolation & purification Bacterial Typing Techniques Base Composition Cell Wall - chemistry Diaminopimelic Acid - chemistry DNA, Bacterial - genetics Fatty Acids - chemistry India Nucleic Acid Hybridization Phospholipids - chemistry Phylogeny Rivers - microbiology RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Vitamin K 2 - analogs & derivatives Vitamin K 2 - chemistry |
| title | Fictibacillus aquaticus sp. nov., isolated from downstream river water |
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