Variable angle gray level co‐occurrence matrix analysis of T2 relaxation time maps reveals degenerative changes of cartilage in knee osteoarthritis: Oulu knee osteoarthritis study
Background Texture analysis methods based on gray level co‐occurrence matrices (GLCM) can be optimized to probe the spatial correspondence information from knee MRI T2 maps and the changes caused by osteoarthritis, and thus possibly leading to a more sensitive characterization of osteoarthritic cart...
Gespeichert in:
Veröffentlicht in: | Journal of magnetic resonance imaging 2018-05, Vol.47 (5), p.1316-1327 |
---|---|
Hauptverfasser: | , , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 1327 |
---|---|
container_issue | 5 |
container_start_page | 1316 |
container_title | Journal of magnetic resonance imaging |
container_volume | 47 |
creator | Peuna, Arttu Hekkala, Joonas Haapea, Marianne Podlipská, Jana Guermazi, Ali Saarakkala, Simo Nieminen, Miika T. Lammentausta, Eveliina |
description | Background
Texture analysis methods based on gray level co‐occurrence matrices (GLCM) can be optimized to probe the spatial correspondence information from knee MRI T2 maps and the changes caused by osteoarthritis, and thus possibly leading to a more sensitive characterization of osteoarthritic cartilage. Curvature of the cartilage surfaces combined with the low image resolution in relation to cartilage thickness set special requirements for an effective texture analysis tool.
Purpose/Hypothesis
To introduce a novel implementation of GLCM algorithm optimized for cartilage texture analysis; to evaluate the performance of the designed algorithm against mean T2 relaxation time analysis; and to identify the most suitable texture features for discerning osteoarthritic subjects and asymptomatic controls.
Study Type
Case control.
Population/Subjects/Phantom/Specimen/animal Model
Eighty symptomatic osteoarthritis patients and 64 asymptomatic controls.
Field Strength/Sequence
Multislice multiecho spin echo sequence on a 3T MRI system.
Assessment
The T2 relaxation time maps were manually segmented by an operator trained for the task. Texture analysis was performed using an in‐house algorithm developed in MATLAB.
Statistical Tests
Symptomatic and asymptomatic subjects were compared using Mann–Whitney U‐test. Repeatability of different features was addressed using the concordance correlation coefficient (CCC). Spearman's correlations between the features were determined.
Results
The algorithm displayed excellent performance in discerning symptomatic and asymptomatic subjects. Fifteen features provided a significant difference between the groups (P ≤ 0.05) and 12 of those had P values smaller than the mean T2 differences. Most of the studied texture features were highly repeatable with CCC over 90%. For the features with significant differences, correlation with mean T2 was low or moderate (|r| ≤ 0.5).
Data Conclusion
With careful parameter and feature selection and algorithm optimization, texture analysis provides a powerful tool for assessing knee osteoarthritis with more sensitive detection of cartilage degeneration compared to the mean value of the T2 relaxation times in an identical region of interest.
Level of Evidence: 2
Technical Efficacy Stage 2
J. Magn. Reson. Imaging 2018;47:1316–1327. |
doi_str_mv | 10.1002/jmri.25881 |
format | Article |
fullrecord | <record><control><sourceid>proquest_wiley</sourceid><recordid>TN_cdi_proquest_miscellaneous_1958543811</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2024885936</sourcerecordid><originalsourceid>FETCH-LOGICAL-p1031-aef550c25a9819937dff44baa26373f8fa2be660b0fe63258cc6b2b6c7f273443</originalsourceid><addsrcrecordid>eNptkc1O3DAQx6OqSKXQS5_AEpdeAv6IE6e3ChUKokJCtFdr4h0vXpx4aycLufUReJm-EE-Cd-mp6mU-fzMjzb8oPjJ6zCjlJ6s-umMulWJvin0mOS9zUr_NMZWiZIo274r3Ka0opW1byf3iz0-IDjqPBIZltssIM_G4QU9MeP79FIyZYsTBIOlhjO4xc-Dn5BIJltxyEtHDI4wuDGR0_ZZap1zcIPhEFrjEAWNub5CYu3wCd3MG4ug8LJG4gdwPiCSkEUOu3kU3uvSZXE9--l-HpHFazIfFns378cNff1D8OPt6e_qtvLo-vzj9clWuGRWsBLRSUsMltIq1rWgW1lZVB8Br0QirLPAO65p21GIt8qeMqTve1aaxvBFVJQ6KT6971zH8mjCNunfJoPcwYJiSZq1UshKKsYwe_YOuwhTzr5LmlFdKyVbUmWKv1IPzOOt1dD3EWTOqt_LprXx6J5--_H5zsYvEC_kwlYA</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2024885936</pqid></control><display><type>article</type><title>Variable angle gray level co‐occurrence matrix analysis of T2 relaxation time maps reveals degenerative changes of cartilage in knee osteoarthritis: Oulu knee osteoarthritis study</title><source>Wiley Online Library Journals Frontfile Complete</source><source>Wiley Free Content</source><creator>Peuna, Arttu ; Hekkala, Joonas ; Haapea, Marianne ; Podlipská, Jana ; Guermazi, Ali ; Saarakkala, Simo ; Nieminen, Miika T. ; Lammentausta, Eveliina</creator><creatorcontrib>Peuna, Arttu ; Hekkala, Joonas ; Haapea, Marianne ; Podlipská, Jana ; Guermazi, Ali ; Saarakkala, Simo ; Nieminen, Miika T. ; Lammentausta, Eveliina</creatorcontrib><description>Background
Texture analysis methods based on gray level co‐occurrence matrices (GLCM) can be optimized to probe the spatial correspondence information from knee MRI T2 maps and the changes caused by osteoarthritis, and thus possibly leading to a more sensitive characterization of osteoarthritic cartilage. Curvature of the cartilage surfaces combined with the low image resolution in relation to cartilage thickness set special requirements for an effective texture analysis tool.
Purpose/Hypothesis
To introduce a novel implementation of GLCM algorithm optimized for cartilage texture analysis; to evaluate the performance of the designed algorithm against mean T2 relaxation time analysis; and to identify the most suitable texture features for discerning osteoarthritic subjects and asymptomatic controls.
Study Type
Case control.
Population/Subjects/Phantom/Specimen/animal Model
Eighty symptomatic osteoarthritis patients and 64 asymptomatic controls.
Field Strength/Sequence
Multislice multiecho spin echo sequence on a 3T MRI system.
Assessment
The T2 relaxation time maps were manually segmented by an operator trained for the task. Texture analysis was performed using an in‐house algorithm developed in MATLAB.
Statistical Tests
Symptomatic and asymptomatic subjects were compared using Mann–Whitney U‐test. Repeatability of different features was addressed using the concordance correlation coefficient (CCC). Spearman's correlations between the features were determined.
Results
The algorithm displayed excellent performance in discerning symptomatic and asymptomatic subjects. Fifteen features provided a significant difference between the groups (P ≤ 0.05) and 12 of those had P values smaller than the mean T2 differences. Most of the studied texture features were highly repeatable with CCC over 90%. For the features with significant differences, correlation with mean T2 was low or moderate (|r| ≤ 0.5).
Data Conclusion
With careful parameter and feature selection and algorithm optimization, texture analysis provides a powerful tool for assessing knee osteoarthritis with more sensitive detection of cartilage degeneration compared to the mean value of the T2 relaxation times in an identical region of interest.
Level of Evidence: 2
Technical Efficacy Stage 2
J. Magn. Reson. Imaging 2018;47:1316–1327.</description><identifier>ISSN: 1053-1807</identifier><identifier>EISSN: 1522-2586</identifier><identifier>DOI: 10.1002/jmri.25881</identifier><language>eng</language><publisher>Nashville: Wiley Subscription Services, Inc</publisher><subject>Algorithms ; Arthritis ; Biocompatibility ; Cartilage ; Cartilage diseases ; Correlation coefficient ; Correlation coefficients ; Curvature ; Degeneration ; Field strength ; gray level co‐occurrence matrix (GLCM) ; Image processing ; Image resolution ; Knee ; Magnetic resonance imaging ; magnetic resonance imaging (MRI) ; Matrix methods ; Optimization ; Osteoarthritis ; pattern recognition and classification ; Population (statistical) ; Population studies ; Relaxation time ; Statistical analysis ; Statistical tests ; Texture</subject><ispartof>Journal of magnetic resonance imaging, 2018-05, Vol.47 (5), p.1316-1327</ispartof><rights>2017 International Society for Magnetic Resonance in Medicine</rights><rights>2018 International Society for Magnetic Resonance in Medicine</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fjmri.25881$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fjmri.25881$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,1427,27903,27904,45553,45554,46388,46812</link.rule.ids></links><search><creatorcontrib>Peuna, Arttu</creatorcontrib><creatorcontrib>Hekkala, Joonas</creatorcontrib><creatorcontrib>Haapea, Marianne</creatorcontrib><creatorcontrib>Podlipská, Jana</creatorcontrib><creatorcontrib>Guermazi, Ali</creatorcontrib><creatorcontrib>Saarakkala, Simo</creatorcontrib><creatorcontrib>Nieminen, Miika T.</creatorcontrib><creatorcontrib>Lammentausta, Eveliina</creatorcontrib><title>Variable angle gray level co‐occurrence matrix analysis of T2 relaxation time maps reveals degenerative changes of cartilage in knee osteoarthritis: Oulu knee osteoarthritis study</title><title>Journal of magnetic resonance imaging</title><description>Background
Texture analysis methods based on gray level co‐occurrence matrices (GLCM) can be optimized to probe the spatial correspondence information from knee MRI T2 maps and the changes caused by osteoarthritis, and thus possibly leading to a more sensitive characterization of osteoarthritic cartilage. Curvature of the cartilage surfaces combined with the low image resolution in relation to cartilage thickness set special requirements for an effective texture analysis tool.
Purpose/Hypothesis
To introduce a novel implementation of GLCM algorithm optimized for cartilage texture analysis; to evaluate the performance of the designed algorithm against mean T2 relaxation time analysis; and to identify the most suitable texture features for discerning osteoarthritic subjects and asymptomatic controls.
Study Type
Case control.
Population/Subjects/Phantom/Specimen/animal Model
Eighty symptomatic osteoarthritis patients and 64 asymptomatic controls.
Field Strength/Sequence
Multislice multiecho spin echo sequence on a 3T MRI system.
Assessment
The T2 relaxation time maps were manually segmented by an operator trained for the task. Texture analysis was performed using an in‐house algorithm developed in MATLAB.
Statistical Tests
Symptomatic and asymptomatic subjects were compared using Mann–Whitney U‐test. Repeatability of different features was addressed using the concordance correlation coefficient (CCC). Spearman's correlations between the features were determined.
Results
The algorithm displayed excellent performance in discerning symptomatic and asymptomatic subjects. Fifteen features provided a significant difference between the groups (P ≤ 0.05) and 12 of those had P values smaller than the mean T2 differences. Most of the studied texture features were highly repeatable with CCC over 90%. For the features with significant differences, correlation with mean T2 was low or moderate (|r| ≤ 0.5).
Data Conclusion
With careful parameter and feature selection and algorithm optimization, texture analysis provides a powerful tool for assessing knee osteoarthritis with more sensitive detection of cartilage degeneration compared to the mean value of the T2 relaxation times in an identical region of interest.
Level of Evidence: 2
Technical Efficacy Stage 2
J. Magn. Reson. Imaging 2018;47:1316–1327.</description><subject>Algorithms</subject><subject>Arthritis</subject><subject>Biocompatibility</subject><subject>Cartilage</subject><subject>Cartilage diseases</subject><subject>Correlation coefficient</subject><subject>Correlation coefficients</subject><subject>Curvature</subject><subject>Degeneration</subject><subject>Field strength</subject><subject>gray level co‐occurrence matrix (GLCM)</subject><subject>Image processing</subject><subject>Image resolution</subject><subject>Knee</subject><subject>Magnetic resonance imaging</subject><subject>magnetic resonance imaging (MRI)</subject><subject>Matrix methods</subject><subject>Optimization</subject><subject>Osteoarthritis</subject><subject>pattern recognition and classification</subject><subject>Population (statistical)</subject><subject>Population studies</subject><subject>Relaxation time</subject><subject>Statistical analysis</subject><subject>Statistical tests</subject><subject>Texture</subject><issn>1053-1807</issn><issn>1522-2586</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNptkc1O3DAQx6OqSKXQS5_AEpdeAv6IE6e3ChUKokJCtFdr4h0vXpx4aycLufUReJm-EE-Cd-mp6mU-fzMjzb8oPjJ6zCjlJ6s-umMulWJvin0mOS9zUr_NMZWiZIo274r3Ka0opW1byf3iz0-IDjqPBIZltssIM_G4QU9MeP79FIyZYsTBIOlhjO4xc-Dn5BIJltxyEtHDI4wuDGR0_ZZap1zcIPhEFrjEAWNub5CYu3wCd3MG4ug8LJG4gdwPiCSkEUOu3kU3uvSZXE9--l-HpHFazIfFns378cNff1D8OPt6e_qtvLo-vzj9clWuGRWsBLRSUsMltIq1rWgW1lZVB8Br0QirLPAO65p21GIt8qeMqTve1aaxvBFVJQ6KT6971zH8mjCNunfJoPcwYJiSZq1UshKKsYwe_YOuwhTzr5LmlFdKyVbUmWKv1IPzOOt1dD3EWTOqt_LprXx6J5--_H5zsYvEC_kwlYA</recordid><startdate>201805</startdate><enddate>201805</enddate><creator>Peuna, Arttu</creator><creator>Hekkala, Joonas</creator><creator>Haapea, Marianne</creator><creator>Podlipská, Jana</creator><creator>Guermazi, Ali</creator><creator>Saarakkala, Simo</creator><creator>Nieminen, Miika T.</creator><creator>Lammentausta, Eveliina</creator><general>Wiley Subscription Services, Inc</general><scope>7QO</scope><scope>7TK</scope><scope>8FD</scope><scope>FR3</scope><scope>K9.</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>201805</creationdate><title>Variable angle gray level co‐occurrence matrix analysis of T2 relaxation time maps reveals degenerative changes of cartilage in knee osteoarthritis: Oulu knee osteoarthritis study</title><author>Peuna, Arttu ; Hekkala, Joonas ; Haapea, Marianne ; Podlipská, Jana ; Guermazi, Ali ; Saarakkala, Simo ; Nieminen, Miika T. ; Lammentausta, Eveliina</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p1031-aef550c25a9819937dff44baa26373f8fa2be660b0fe63258cc6b2b6c7f273443</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Algorithms</topic><topic>Arthritis</topic><topic>Biocompatibility</topic><topic>Cartilage</topic><topic>Cartilage diseases</topic><topic>Correlation coefficient</topic><topic>Correlation coefficients</topic><topic>Curvature</topic><topic>Degeneration</topic><topic>Field strength</topic><topic>gray level co‐occurrence matrix (GLCM)</topic><topic>Image processing</topic><topic>Image resolution</topic><topic>Knee</topic><topic>Magnetic resonance imaging</topic><topic>magnetic resonance imaging (MRI)</topic><topic>Matrix methods</topic><topic>Optimization</topic><topic>Osteoarthritis</topic><topic>pattern recognition and classification</topic><topic>Population (statistical)</topic><topic>Population studies</topic><topic>Relaxation time</topic><topic>Statistical analysis</topic><topic>Statistical tests</topic><topic>Texture</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Peuna, Arttu</creatorcontrib><creatorcontrib>Hekkala, Joonas</creatorcontrib><creatorcontrib>Haapea, Marianne</creatorcontrib><creatorcontrib>Podlipská, Jana</creatorcontrib><creatorcontrib>Guermazi, Ali</creatorcontrib><creatorcontrib>Saarakkala, Simo</creatorcontrib><creatorcontrib>Nieminen, Miika T.</creatorcontrib><creatorcontrib>Lammentausta, Eveliina</creatorcontrib><collection>Biotechnology Research Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of magnetic resonance imaging</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Peuna, Arttu</au><au>Hekkala, Joonas</au><au>Haapea, Marianne</au><au>Podlipská, Jana</au><au>Guermazi, Ali</au><au>Saarakkala, Simo</au><au>Nieminen, Miika T.</au><au>Lammentausta, Eveliina</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Variable angle gray level co‐occurrence matrix analysis of T2 relaxation time maps reveals degenerative changes of cartilage in knee osteoarthritis: Oulu knee osteoarthritis study</atitle><jtitle>Journal of magnetic resonance imaging</jtitle><date>2018-05</date><risdate>2018</risdate><volume>47</volume><issue>5</issue><spage>1316</spage><epage>1327</epage><pages>1316-1327</pages><issn>1053-1807</issn><eissn>1522-2586</eissn><abstract>Background
Texture analysis methods based on gray level co‐occurrence matrices (GLCM) can be optimized to probe the spatial correspondence information from knee MRI T2 maps and the changes caused by osteoarthritis, and thus possibly leading to a more sensitive characterization of osteoarthritic cartilage. Curvature of the cartilage surfaces combined with the low image resolution in relation to cartilage thickness set special requirements for an effective texture analysis tool.
Purpose/Hypothesis
To introduce a novel implementation of GLCM algorithm optimized for cartilage texture analysis; to evaluate the performance of the designed algorithm against mean T2 relaxation time analysis; and to identify the most suitable texture features for discerning osteoarthritic subjects and asymptomatic controls.
Study Type
Case control.
Population/Subjects/Phantom/Specimen/animal Model
Eighty symptomatic osteoarthritis patients and 64 asymptomatic controls.
Field Strength/Sequence
Multislice multiecho spin echo sequence on a 3T MRI system.
Assessment
The T2 relaxation time maps were manually segmented by an operator trained for the task. Texture analysis was performed using an in‐house algorithm developed in MATLAB.
Statistical Tests
Symptomatic and asymptomatic subjects were compared using Mann–Whitney U‐test. Repeatability of different features was addressed using the concordance correlation coefficient (CCC). Spearman's correlations between the features were determined.
Results
The algorithm displayed excellent performance in discerning symptomatic and asymptomatic subjects. Fifteen features provided a significant difference between the groups (P ≤ 0.05) and 12 of those had P values smaller than the mean T2 differences. Most of the studied texture features were highly repeatable with CCC over 90%. For the features with significant differences, correlation with mean T2 was low or moderate (|r| ≤ 0.5).
Data Conclusion
With careful parameter and feature selection and algorithm optimization, texture analysis provides a powerful tool for assessing knee osteoarthritis with more sensitive detection of cartilage degeneration compared to the mean value of the T2 relaxation times in an identical region of interest.
Level of Evidence: 2
Technical Efficacy Stage 2
J. Magn. Reson. Imaging 2018;47:1316–1327.</abstract><cop>Nashville</cop><pub>Wiley Subscription Services, Inc</pub><doi>10.1002/jmri.25881</doi><tpages>12</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1053-1807 |
ispartof | Journal of magnetic resonance imaging, 2018-05, Vol.47 (5), p.1316-1327 |
issn | 1053-1807 1522-2586 |
language | eng |
recordid | cdi_proquest_miscellaneous_1958543811 |
source | Wiley Online Library Journals Frontfile Complete; Wiley Free Content |
subjects | Algorithms Arthritis Biocompatibility Cartilage Cartilage diseases Correlation coefficient Correlation coefficients Curvature Degeneration Field strength gray level co‐occurrence matrix (GLCM) Image processing Image resolution Knee Magnetic resonance imaging magnetic resonance imaging (MRI) Matrix methods Optimization Osteoarthritis pattern recognition and classification Population (statistical) Population studies Relaxation time Statistical analysis Statistical tests Texture |
title | Variable angle gray level co‐occurrence matrix analysis of T2 relaxation time maps reveals degenerative changes of cartilage in knee osteoarthritis: Oulu knee osteoarthritis study |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-23T02%3A50%3A19IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_wiley&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Variable%20angle%20gray%20level%20co%E2%80%90occurrence%20matrix%20analysis%20of%20T2%20relaxation%20time%20maps%20reveals%20degenerative%20changes%20of%20cartilage%20in%20knee%20osteoarthritis:%20Oulu%20knee%20osteoarthritis%20study&rft.jtitle=Journal%20of%20magnetic%20resonance%20imaging&rft.au=Peuna,%20Arttu&rft.date=2018-05&rft.volume=47&rft.issue=5&rft.spage=1316&rft.epage=1327&rft.pages=1316-1327&rft.issn=1053-1807&rft.eissn=1522-2586&rft_id=info:doi/10.1002/jmri.25881&rft_dat=%3Cproquest_wiley%3E2024885936%3C/proquest_wiley%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2024885936&rft_id=info:pmid/&rfr_iscdi=true |