A Computational Scheme To Evaluate Hamaker Constants of Molecules with Practical Size and Anisotropy
We propose a computational scheme to evaluate Hamaker constants, A, of molecules with practical sizes and anisotropies. Upon the increasing feasibility of diffusion Monte Carlo (DMC) methods to evaluate binding curves for such molecules to extract the constants, we discussed how to treat the averagi...
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Veröffentlicht in: | Journal of chemical theory and computation 2017-11, Vol.13 (11), p.5217-5230 |
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description | We propose a computational scheme to evaluate Hamaker constants, A, of molecules with practical sizes and anisotropies. Upon the increasing feasibility of diffusion Monte Carlo (DMC) methods to evaluate binding curves for such molecules to extract the constants, we discussed how to treat the averaging over anisotropy and how to correct the bias due to the nonadditivity. We have developed a computational procedure for dealing with the anisotropy and reducing statistical errors and biases in DMC evaluations, based on possible validations on predicted A. We applied the scheme to cyclohexasilane molecule, Si6H12, used in “printed electronics” fabrications, getting A ≈ 105 ± 2 zJ, being in plausible range supported even by other possible extrapolations. The scheme provided here would open a way to use handy ab initio evaluations to predict wettabilities as in the form of materials informatics over broader molecules. |
doi_str_mv | 10.1021/acs.jctc.6b01159 |
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Upon the increasing feasibility of diffusion Monte Carlo (DMC) methods to evaluate binding curves for such molecules to extract the constants, we discussed how to treat the averaging over anisotropy and how to correct the bias due to the nonadditivity. We have developed a computational procedure for dealing with the anisotropy and reducing statistical errors and biases in DMC evaluations, based on possible validations on predicted A. We applied the scheme to cyclohexasilane molecule, Si6H12, used in “printed electronics” fabrications, getting A ≈ 105 ± 2 zJ, being in plausible range supported even by other possible extrapolations. The scheme provided here would open a way to use handy ab initio evaluations to predict wettabilities as in the form of materials informatics over broader molecules.</description><identifier>ISSN: 1549-9618</identifier><identifier>EISSN: 1549-9626</identifier><identifier>DOI: 10.1021/acs.jctc.6b01159</identifier><identifier>PMID: 28981266</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Anisotropy ; Computation ; Feasibility studies ; Molecular chains ; Monte Carlo simulation</subject><ispartof>Journal of chemical theory and computation, 2017-11, Vol.13 (11), p.5217-5230</ispartof><rights>Copyright © 2017 American Chemical Society</rights><rights>Copyright American Chemical Society Nov 14, 2017</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a516t-66618cc86c3f66ba651d9fb24d1cd081a173086b9f1feee11091048fb21d3003</citedby><cites>FETCH-LOGICAL-a516t-66618cc86c3f66ba651d9fb24d1cd081a173086b9f1feee11091048fb21d3003</cites><orcidid>0000-0002-2580-0907</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/acs.jctc.6b01159$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/acs.jctc.6b01159$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>314,780,784,2765,27076,27924,27925,56738,56788</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28981266$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hongo, Kenta</creatorcontrib><creatorcontrib>Maezono, Ryo</creatorcontrib><title>A Computational Scheme To Evaluate Hamaker Constants of Molecules with Practical Size and Anisotropy</title><title>Journal of chemical theory and computation</title><addtitle>J. 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The scheme provided here would open a way to use handy ab initio evaluations to predict wettabilities as in the form of materials informatics over broader molecules.</description><subject>Anisotropy</subject><subject>Computation</subject><subject>Feasibility studies</subject><subject>Molecular chains</subject><subject>Monte Carlo simulation</subject><issn>1549-9618</issn><issn>1549-9626</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><recordid>eNp1kb1PwzAQxS0EoqWwMyFLLAyk-OzETcaqKhSpCCS6W47jqClJXGwHVP56XNoyIDHdDb_37uMhdAlkCITCnVRuuFJeDXlOAJLsCPUhibMo45Qf__aQ9tCZcytCGIspO0U9mmYpUM77qBjjiWnWnZe-Mq2s8ata6kbjhcHTD1l30ms8k4180zaArfOy9Q6bEj-ZWquu1g5_Vn6JX6xUvlJbg-pLY9kWeNxWznhr1ptzdFLK2umLfR2gxf10MZlF8-eHx8l4HskEuI84D6sqlXLFSs5zyRMosjKncQGqIClIGDGS8jwrodRaA5AMSJwGAgoWjhugm53t2pr3TjsvmsopXdey1aZzArI4HSUxY6OAXv9BV6az4X4nKIkZjYEADRTZUcoa56wuxdpWjbQbAURsAxAhALENQOwDCJKrvXGXN7r4FRw-HoDbHfAjPQz91-8b7F-Q7w</recordid><startdate>20171114</startdate><enddate>20171114</enddate><creator>Hongo, Kenta</creator><creator>Maezono, Ryo</creator><general>American Chemical Society</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SC</scope><scope>7SR</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>JQ2</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-2580-0907</orcidid></search><sort><creationdate>20171114</creationdate><title>A Computational Scheme To Evaluate Hamaker Constants of Molecules with Practical Size and Anisotropy</title><author>Hongo, Kenta ; Maezono, Ryo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a516t-66618cc86c3f66ba651d9fb24d1cd081a173086b9f1feee11091048fb21d3003</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Anisotropy</topic><topic>Computation</topic><topic>Feasibility studies</topic><topic>Molecular chains</topic><topic>Monte Carlo simulation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hongo, Kenta</creatorcontrib><creatorcontrib>Maezono, Ryo</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Computer and Information Systems Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of chemical theory and computation</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hongo, Kenta</au><au>Maezono, Ryo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A Computational Scheme To Evaluate Hamaker Constants of Molecules with Practical Size and Anisotropy</atitle><jtitle>Journal of chemical theory and computation</jtitle><addtitle>J. Chem. Theory Comput</addtitle><date>2017-11-14</date><risdate>2017</risdate><volume>13</volume><issue>11</issue><spage>5217</spage><epage>5230</epage><pages>5217-5230</pages><issn>1549-9618</issn><eissn>1549-9626</eissn><abstract>We propose a computational scheme to evaluate Hamaker constants, A, of molecules with practical sizes and anisotropies. Upon the increasing feasibility of diffusion Monte Carlo (DMC) methods to evaluate binding curves for such molecules to extract the constants, we discussed how to treat the averaging over anisotropy and how to correct the bias due to the nonadditivity. We have developed a computational procedure for dealing with the anisotropy and reducing statistical errors and biases in DMC evaluations, based on possible validations on predicted A. We applied the scheme to cyclohexasilane molecule, Si6H12, used in “printed electronics” fabrications, getting A ≈ 105 ± 2 zJ, being in plausible range supported even by other possible extrapolations. 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subjects | Anisotropy Computation Feasibility studies Molecular chains Monte Carlo simulation |
title | A Computational Scheme To Evaluate Hamaker Constants of Molecules with Practical Size and Anisotropy |
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