Chemostat-based proteomic analysis of toluene-affected Pseudomonas putida S12
Summary The aim of this study was to assess the cellular response of the solvent‐tolerant Pseudomonas putida S12 to toluene as the single effector. Proteomic analysis (two‐dimensional difference‐in‐gel‐electrophoresis) was used to assess the response of P. putida S12 cultured in chemostats. This app...
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Veröffentlicht in: | Environmental microbiology 2006-09, Vol.8 (9), p.1674-1679 |
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creator | Volkers, Rita J. M. De Jong, Ad L. Hulst, Albert G. Van Baar, Ben L. M. De Bont, Jan A. M. Wery, Jan |
description | Summary
The aim of this study was to assess the cellular response of the solvent‐tolerant Pseudomonas putida S12 to toluene as the single effector. Proteomic analysis (two‐dimensional difference‐in‐gel‐electrophoresis) was used to assess the response of P. putida S12 cultured in chemostats. This approach ensures constant growth conditions, both in the presence and absence of toluene. A considerable negative effect of toluene on the cell yield was found. The need for energy in the defence against toluene was reflected by differentially expressed proteins for cell energy management. In toluene‐stressed cells the balance between proton motive force (PMF) enforcing and dissipating systems was shifted. NAD(P)H generating systems were upregulated whereas the major proton‐driven system, ATP synthase, was downregulated. Other differentially expressed proteins were identified: outer membrane proteins, transport proteins, stress‐related proteins and translation‐related proteins. In addition, a protein with no assigned function was found. This study yielded a more detailed view of the effect of toluene on the intracellular energy management of P. putida S12 and several novel leads have been obtained for further targeted investigations. |
doi_str_mv | 10.1111/j.1462-2920.2006.01056.x |
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The aim of this study was to assess the cellular response of the solvent‐tolerant Pseudomonas putida S12 to toluene as the single effector. Proteomic analysis (two‐dimensional difference‐in‐gel‐electrophoresis) was used to assess the response of P. putida S12 cultured in chemostats. This approach ensures constant growth conditions, both in the presence and absence of toluene. A considerable negative effect of toluene on the cell yield was found. The need for energy in the defence against toluene was reflected by differentially expressed proteins for cell energy management. In toluene‐stressed cells the balance between proton motive force (PMF) enforcing and dissipating systems was shifted. NAD(P)H generating systems were upregulated whereas the major proton‐driven system, ATP synthase, was downregulated. Other differentially expressed proteins were identified: outer membrane proteins, transport proteins, stress‐related proteins and translation‐related proteins. In addition, a protein with no assigned function was found. This study yielded a more detailed view of the effect of toluene on the intracellular energy management of P. putida S12 and several novel leads have been obtained for further targeted investigations.</description><identifier>ISSN: 1462-2912</identifier><identifier>EISSN: 1462-2920</identifier><identifier>DOI: 10.1111/j.1462-2920.2006.01056.x</identifier><identifier>PMID: 16913927</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Publishing Ltd</publisher><subject>Bacterial Proteins - metabolism ; Bioreactors - microbiology ; Electrophoresis, Gel, Two-Dimensional ; Molecular Sequence Data ; Proteome - analysis ; Pseudomonas putida ; Pseudomonas putida - drug effects ; Pseudomonas putida - metabolism ; Toluene - metabolism ; Toluene - toxicity</subject><ispartof>Environmental microbiology, 2006-09, Vol.8 (9), p.1674-1679</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4366-419265b76df6700270fffbcf834823d048b440a45f75fd26363305b3f056760a3</citedby><cites>FETCH-LOGICAL-c4366-419265b76df6700270fffbcf834823d048b440a45f75fd26363305b3f056760a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fj.1462-2920.2006.01056.x$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fj.1462-2920.2006.01056.x$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1417,27924,27925,45574,45575</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16913927$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Volkers, Rita J. M.</creatorcontrib><creatorcontrib>De Jong, Ad L.</creatorcontrib><creatorcontrib>Hulst, Albert G.</creatorcontrib><creatorcontrib>Van Baar, Ben L. M.</creatorcontrib><creatorcontrib>De Bont, Jan A. M.</creatorcontrib><creatorcontrib>Wery, Jan</creatorcontrib><title>Chemostat-based proteomic analysis of toluene-affected Pseudomonas putida S12</title><title>Environmental microbiology</title><addtitle>Environ Microbiol</addtitle><description>Summary
The aim of this study was to assess the cellular response of the solvent‐tolerant Pseudomonas putida S12 to toluene as the single effector. Proteomic analysis (two‐dimensional difference‐in‐gel‐electrophoresis) was used to assess the response of P. putida S12 cultured in chemostats. This approach ensures constant growth conditions, both in the presence and absence of toluene. A considerable negative effect of toluene on the cell yield was found. The need for energy in the defence against toluene was reflected by differentially expressed proteins for cell energy management. In toluene‐stressed cells the balance between proton motive force (PMF) enforcing and dissipating systems was shifted. NAD(P)H generating systems were upregulated whereas the major proton‐driven system, ATP synthase, was downregulated. Other differentially expressed proteins were identified: outer membrane proteins, transport proteins, stress‐related proteins and translation‐related proteins. In addition, a protein with no assigned function was found. This study yielded a more detailed view of the effect of toluene on the intracellular energy management of P. putida S12 and several novel leads have been obtained for further targeted investigations.</description><subject>Bacterial Proteins - metabolism</subject><subject>Bioreactors - microbiology</subject><subject>Electrophoresis, Gel, Two-Dimensional</subject><subject>Molecular Sequence Data</subject><subject>Proteome - analysis</subject><subject>Pseudomonas putida</subject><subject>Pseudomonas putida - drug effects</subject><subject>Pseudomonas putida - metabolism</subject><subject>Toluene - metabolism</subject><subject>Toluene - toxicity</subject><issn>1462-2912</issn><issn>1462-2920</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkM9PwjAUxxujEUT_BbOTt83XH-vYwYMhgCioUQzemm5r43CjuG4R_ns7IXi1l76k38_rex-EPAwBdud6GWDGiU9iAgEB4AFgCHmwOULdw8Pxocakg86sXQLgiEZwijqYx5jGJOqi2eBDlcbWsvYTaVXmrStTK1PmqSdXstja3HpGe7UpGrVSvtRapbWLPVvVZKY0K2m9dVPnmfReMTlHJ1oWVl3s7x56Gw3ngzt_-jSeDG6nfsoo5z7DMeFhEvFM8wiARKC1TlLdp6xPaAasnzAGkoU6CnVGOOWUQphQ7ZaMOEjaQ1e7vm7ar0bZWpS5TVVRyJUyjRU4Zm5Txl2wvwumlbG2Ulqsq7yU1VZgEK1KsRStJdEaE61K8atSbBx6uf-jSUqV_YF7dy5wswt854Xa_ruxGM4mbeV4f8fntlabAy-rT8Hd9KFYPI7FCBYv93P8Lh7oDy8BkA8</recordid><startdate>200609</startdate><enddate>200609</enddate><creator>Volkers, Rita J. M.</creator><creator>De Jong, Ad L.</creator><creator>Hulst, Albert G.</creator><creator>Van Baar, Ben L. M.</creator><creator>De Bont, Jan A. M.</creator><creator>Wery, Jan</creator><general>Blackwell Publishing Ltd</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope></search><sort><creationdate>200609</creationdate><title>Chemostat-based proteomic analysis of toluene-affected Pseudomonas putida S12</title><author>Volkers, Rita J. M. ; De Jong, Ad L. ; Hulst, Albert G. ; Van Baar, Ben L. M. ; De Bont, Jan A. M. ; Wery, Jan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4366-419265b76df6700270fffbcf834823d048b440a45f75fd26363305b3f056760a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Bacterial Proteins - metabolism</topic><topic>Bioreactors - microbiology</topic><topic>Electrophoresis, Gel, Two-Dimensional</topic><topic>Molecular Sequence Data</topic><topic>Proteome - analysis</topic><topic>Pseudomonas putida</topic><topic>Pseudomonas putida - drug effects</topic><topic>Pseudomonas putida - metabolism</topic><topic>Toluene - metabolism</topic><topic>Toluene - toxicity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Volkers, Rita J. M.</creatorcontrib><creatorcontrib>De Jong, Ad L.</creatorcontrib><creatorcontrib>Hulst, Albert G.</creatorcontrib><creatorcontrib>Van Baar, Ben L. M.</creatorcontrib><creatorcontrib>De Bont, Jan A. M.</creatorcontrib><creatorcontrib>Wery, Jan</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><jtitle>Environmental microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Volkers, Rita J. M.</au><au>De Jong, Ad L.</au><au>Hulst, Albert G.</au><au>Van Baar, Ben L. M.</au><au>De Bont, Jan A. M.</au><au>Wery, Jan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Chemostat-based proteomic analysis of toluene-affected Pseudomonas putida S12</atitle><jtitle>Environmental microbiology</jtitle><addtitle>Environ Microbiol</addtitle><date>2006-09</date><risdate>2006</risdate><volume>8</volume><issue>9</issue><spage>1674</spage><epage>1679</epage><pages>1674-1679</pages><issn>1462-2912</issn><eissn>1462-2920</eissn><abstract>Summary
The aim of this study was to assess the cellular response of the solvent‐tolerant Pseudomonas putida S12 to toluene as the single effector. Proteomic analysis (two‐dimensional difference‐in‐gel‐electrophoresis) was used to assess the response of P. putida S12 cultured in chemostats. This approach ensures constant growth conditions, both in the presence and absence of toluene. A considerable negative effect of toluene on the cell yield was found. The need for energy in the defence against toluene was reflected by differentially expressed proteins for cell energy management. In toluene‐stressed cells the balance between proton motive force (PMF) enforcing and dissipating systems was shifted. NAD(P)H generating systems were upregulated whereas the major proton‐driven system, ATP synthase, was downregulated. Other differentially expressed proteins were identified: outer membrane proteins, transport proteins, stress‐related proteins and translation‐related proteins. In addition, a protein with no assigned function was found. This study yielded a more detailed view of the effect of toluene on the intracellular energy management of P. putida S12 and several novel leads have been obtained for further targeted investigations.</abstract><cop>Oxford, UK</cop><pub>Blackwell Publishing Ltd</pub><pmid>16913927</pmid><doi>10.1111/j.1462-2920.2006.01056.x</doi><tpages>6</tpages></addata></record> |
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subjects | Bacterial Proteins - metabolism Bioreactors - microbiology Electrophoresis, Gel, Two-Dimensional Molecular Sequence Data Proteome - analysis Pseudomonas putida Pseudomonas putida - drug effects Pseudomonas putida - metabolism Toluene - metabolism Toluene - toxicity |
title | Chemostat-based proteomic analysis of toluene-affected Pseudomonas putida S12 |
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