Phylogenetic analysis of the Malvadendrina clade (Malvaceae s.l.) based on plastid DNA sequences
Phylogenetic relationships within Malvaceae s.l., a clade that includes the traditional families Bombacaceae, Malvaceae s.str., Sterculiaceae, and Tiliaceae, have become greatly clarified thanks to recent molecular systematic research. In this paper, we use DNA sequences of four plastid regions ( at...
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description | Phylogenetic relationships within Malvaceae s.l., a clade that includes the traditional families Bombacaceae, Malvaceae s.str., Sterculiaceae, and Tiliaceae, have become greatly clarified thanks to recent molecular systematic research. In this paper, we use DNA sequences of four plastid regions (
atpB,
matK,
ndhF, and
rbcL) to study relationships within Malvadendrina, one of the two major clades of Malvaceae s.l. The four data sets were generally in agreement, but five terminal taxa manifested highly unexpected affinities in the
rbcL partition, and the non-coding sequences of the
trnK intron were found to provide limited phylogenetic information for resolving relationships at the base of Malvadendrina. The remaining data strongly support the existence of six major clades within Malvadendrina: Brownlowioideae, Dombeyoideae, Helicteroideae, Malvatheca (comprising Bombacoideae and Malvoideae), Sterculioideae, and Tilioideae. These data also resolve the placement of two problematic taxa:
Nesogordonia (in Dombeyoideae) and
Mortoniodendron (in Tilioideae). The relationships among the six clades are not definitively resolved, but the best-supported topology has Dombeyoideae as sister to the remainder of Malvadendrina (posterior probability
PP
=
80
%
) and Sterculioideae as sister to Malvatheca (
PP
=
86
%
). This early branching position of Dombeyoideae is supported by similarities in floral characters between members of that clade and outgroup taxa in Byttnerioideae. Similarly, the sister-group relationship of Sterculioideae and Malvatheca receives support from androecial characteristics, like subsessile or sessile anthers and an absence of staminodes, shared by these two clades. |
doi_str_mv | 10.1016/j.ode.2004.08.001 |
format | Article |
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atpB,
matK,
ndhF, and
rbcL) to study relationships within Malvadendrina, one of the two major clades of Malvaceae s.l. The four data sets were generally in agreement, but five terminal taxa manifested highly unexpected affinities in the
rbcL partition, and the non-coding sequences of the
trnK intron were found to provide limited phylogenetic information for resolving relationships at the base of Malvadendrina. The remaining data strongly support the existence of six major clades within Malvadendrina: Brownlowioideae, Dombeyoideae, Helicteroideae, Malvatheca (comprising Bombacoideae and Malvoideae), Sterculioideae, and Tilioideae. These data also resolve the placement of two problematic taxa:
Nesogordonia (in Dombeyoideae) and
Mortoniodendron (in Tilioideae). The relationships among the six clades are not definitively resolved, but the best-supported topology has Dombeyoideae as sister to the remainder of Malvadendrina (posterior probability
PP
=
80
%
) and Sterculioideae as sister to Malvatheca (
PP
=
86
%
). This early branching position of Dombeyoideae is supported by similarities in floral characters between members of that clade and outgroup taxa in Byttnerioideae. Similarly, the sister-group relationship of Sterculioideae and Malvatheca receives support from androecial characteristics, like subsessile or sessile anthers and an absence of staminodes, shared by these two clades.</description><identifier>ISSN: 1439-6092</identifier><identifier>EISSN: 1618-1077</identifier><identifier>DOI: 10.1016/j.ode.2004.08.001</identifier><language>eng</language><publisher>Elsevier GmbH</publisher><subject>Bombacaceae ; Character evolution ; Malvaceae ; Malvadendrina ; Molecular systematics ; Sterculiaceae ; Tiliaceae</subject><ispartof>Organisms diversity & evolution, 2005-06, Vol.5 (2), p.109-123</ispartof><rights>2005 Gesellschaft für Biologische Systematik</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c328t-e6a15b58bf2dd2489c87365ea0913b41e3fb5b76de9b798de782ec82da6c58f73</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids></links><search><creatorcontrib>Nyffeler, Reto</creatorcontrib><creatorcontrib>Bayer, Clemens</creatorcontrib><creatorcontrib>Alverson, William S.</creatorcontrib><creatorcontrib>Yen, Alan</creatorcontrib><creatorcontrib>Whitlock, Barbara A.</creatorcontrib><creatorcontrib>Chase, Mark W.</creatorcontrib><creatorcontrib>Baum, David A.</creatorcontrib><title>Phylogenetic analysis of the Malvadendrina clade (Malvaceae s.l.) based on plastid DNA sequences</title><title>Organisms diversity & evolution</title><description>Phylogenetic relationships within Malvaceae s.l., a clade that includes the traditional families Bombacaceae, Malvaceae s.str., Sterculiaceae, and Tiliaceae, have become greatly clarified thanks to recent molecular systematic research. In this paper, we use DNA sequences of four plastid regions (
atpB,
matK,
ndhF, and
rbcL) to study relationships within Malvadendrina, one of the two major clades of Malvaceae s.l. The four data sets were generally in agreement, but five terminal taxa manifested highly unexpected affinities in the
rbcL partition, and the non-coding sequences of the
trnK intron were found to provide limited phylogenetic information for resolving relationships at the base of Malvadendrina. The remaining data strongly support the existence of six major clades within Malvadendrina: Brownlowioideae, Dombeyoideae, Helicteroideae, Malvatheca (comprising Bombacoideae and Malvoideae), Sterculioideae, and Tilioideae. These data also resolve the placement of two problematic taxa:
Nesogordonia (in Dombeyoideae) and
Mortoniodendron (in Tilioideae). The relationships among the six clades are not definitively resolved, but the best-supported topology has Dombeyoideae as sister to the remainder of Malvadendrina (posterior probability
PP
=
80
%
) and Sterculioideae as sister to Malvatheca (
PP
=
86
%
). This early branching position of Dombeyoideae is supported by similarities in floral characters between members of that clade and outgroup taxa in Byttnerioideae. Similarly, the sister-group relationship of Sterculioideae and Malvatheca receives support from androecial characteristics, like subsessile or sessile anthers and an absence of staminodes, shared by these two clades.</description><subject>Bombacaceae</subject><subject>Character evolution</subject><subject>Malvaceae</subject><subject>Malvadendrina</subject><subject>Molecular systematics</subject><subject>Sterculiaceae</subject><subject>Tiliaceae</subject><issn>1439-6092</issn><issn>1618-1077</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><recordid>eNp9kEtPwzAQhCMEEqXwA7j5hOCQ4EdiO-JUladUHgc4G8feUFduXOK0Uv89LuXMaUermV3Nl2XnBBcEE369KIKFgmJcFlgWGJODbEQ4kTnBQhwmXbI657imx9lJjAuMKSVEjLLPt_nWhy_oYHAG6U77bXQRhRYNc0DP2m-0hc72rtPI-KTR5e_SgAYUC19coUZHsCh0aOV1HJxFty8TFOF7DZ2BeJodtdpHOPub4-zj_u59-pjPXh-eppNZbhiVQw5ck6qpZNNSa2kpayMF4xVoXBPWlARY21SN4BbqRtTSgpAUjKRWc1PJVrBxdrG_u-pDeh0HtXTRgPe6g7COitQlo4KzZCR7o-lDjD20atW7pe63imC1Y6kWKrFUO5YKS5VYpszNPgOpwcZBr6Jxu3rW9WAGZYP7J_0DlIl8eg</recordid><startdate>20050610</startdate><enddate>20050610</enddate><creator>Nyffeler, Reto</creator><creator>Bayer, Clemens</creator><creator>Alverson, William S.</creator><creator>Yen, Alan</creator><creator>Whitlock, Barbara A.</creator><creator>Chase, Mark W.</creator><creator>Baum, David A.</creator><general>Elsevier GmbH</general><scope>6I.</scope><scope>AAFTH</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20050610</creationdate><title>Phylogenetic analysis of the Malvadendrina clade (Malvaceae s.l.) based on plastid DNA sequences</title><author>Nyffeler, Reto ; Bayer, Clemens ; Alverson, William S. ; Yen, Alan ; Whitlock, Barbara A. ; Chase, Mark W. ; Baum, David A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c328t-e6a15b58bf2dd2489c87365ea0913b41e3fb5b76de9b798de782ec82da6c58f73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Bombacaceae</topic><topic>Character evolution</topic><topic>Malvaceae</topic><topic>Malvadendrina</topic><topic>Molecular systematics</topic><topic>Sterculiaceae</topic><topic>Tiliaceae</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nyffeler, Reto</creatorcontrib><creatorcontrib>Bayer, Clemens</creatorcontrib><creatorcontrib>Alverson, William S.</creatorcontrib><creatorcontrib>Yen, Alan</creatorcontrib><creatorcontrib>Whitlock, Barbara A.</creatorcontrib><creatorcontrib>Chase, Mark W.</creatorcontrib><creatorcontrib>Baum, David A.</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Organisms diversity & evolution</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nyffeler, Reto</au><au>Bayer, Clemens</au><au>Alverson, William S.</au><au>Yen, Alan</au><au>Whitlock, Barbara A.</au><au>Chase, Mark W.</au><au>Baum, David A.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Phylogenetic analysis of the Malvadendrina clade (Malvaceae s.l.) based on plastid DNA sequences</atitle><jtitle>Organisms diversity & evolution</jtitle><date>2005-06-10</date><risdate>2005</risdate><volume>5</volume><issue>2</issue><spage>109</spage><epage>123</epage><pages>109-123</pages><issn>1439-6092</issn><eissn>1618-1077</eissn><abstract>Phylogenetic relationships within Malvaceae s.l., a clade that includes the traditional families Bombacaceae, Malvaceae s.str., Sterculiaceae, and Tiliaceae, have become greatly clarified thanks to recent molecular systematic research. In this paper, we use DNA sequences of four plastid regions (
atpB,
matK,
ndhF, and
rbcL) to study relationships within Malvadendrina, one of the two major clades of Malvaceae s.l. The four data sets were generally in agreement, but five terminal taxa manifested highly unexpected affinities in the
rbcL partition, and the non-coding sequences of the
trnK intron were found to provide limited phylogenetic information for resolving relationships at the base of Malvadendrina. The remaining data strongly support the existence of six major clades within Malvadendrina: Brownlowioideae, Dombeyoideae, Helicteroideae, Malvatheca (comprising Bombacoideae and Malvoideae), Sterculioideae, and Tilioideae. These data also resolve the placement of two problematic taxa:
Nesogordonia (in Dombeyoideae) and
Mortoniodendron (in Tilioideae). The relationships among the six clades are not definitively resolved, but the best-supported topology has Dombeyoideae as sister to the remainder of Malvadendrina (posterior probability
PP
=
80
%
) and Sterculioideae as sister to Malvatheca (
PP
=
86
%
). This early branching position of Dombeyoideae is supported by similarities in floral characters between members of that clade and outgroup taxa in Byttnerioideae. Similarly, the sister-group relationship of Sterculioideae and Malvatheca receives support from androecial characteristics, like subsessile or sessile anthers and an absence of staminodes, shared by these two clades.</abstract><pub>Elsevier GmbH</pub><doi>10.1016/j.ode.2004.08.001</doi><tpages>15</tpages><oa>free_for_read</oa></addata></record> |
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source | EZB-FREE-00999 freely available EZB journals; Alma/SFX Local Collection |
subjects | Bombacaceae Character evolution Malvaceae Malvadendrina Molecular systematics Sterculiaceae Tiliaceae |
title | Phylogenetic analysis of the Malvadendrina clade (Malvaceae s.l.) based on plastid DNA sequences |
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