Mucilaginibacter craterilacus sp. nov., isolated from sediment soil of a crater lake
A novel bacterial strain, designated N60AT, was isolated from sediment soil of crater lake, Baekrokdam, Hallasan, Jeju, Republic of Korea. Cells of N60AT were Gram-reaction-negative, oxidase- and catalase-positive, non-motile rods and formed transparent white colonies on ten-fold diluted R2A agar. N...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2017-08, Vol.67 (8), p.2891-2896 |
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| container_title | International journal of systematic and evolutionary microbiology |
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| creator | Lee, Keun Chul Kim, Kwang Kyu Eom, Mi Kyung Kim, Jong-Shik Kim, Dae-Shin Ko, Suk-Hyung Yang, Seung-Hoon Lee, Jung-Sook |
| description | A novel bacterial strain, designated N60AT, was isolated from sediment soil of crater lake, Baekrokdam, Hallasan, Jeju, Republic of Korea. Cells of N60AT were Gram-reaction-negative, oxidase- and catalase-positive, non-motile rods and formed transparent white colonies on ten-fold diluted R2A agar. N60AT contained summed feature 3 (C16 : 1ω7c/C16 : 1ω6c), iso-C15 : 0 and iso-C17 : 0 3-OH as the major fatty acids and MK-7 as the predominant isoprenoid quinone. It contained phosphatidylethanolamine as the predominant polar lipid. The DNA G+C content was 44.4 mol%. Phylogenetic analysis based on 16S rRNA gene sequencing revealed that N60AT formed a separate lineage in the genus Mucilaginibacter and that it was most closely related to Mucilaginibacter frigoritolerans FT22T (96.5 % sequence similarity). Phenotypic, chemotaxonomic and phylogenetic characteristics supported the conclusion that N60AT represents a novel species of the genus Mucilaginibacter, for which the name Mucilaginibacter craterilacus sp. nov. is proposed. The type strain is N60AT (=KCTC 52404T=NRRL B-65396T). |
| doi_str_mv | 10.1099/ijsem.0.002043 |
| format | Article |
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Cells of N60AT were Gram-reaction-negative, oxidase- and catalase-positive, non-motile rods and formed transparent white colonies on ten-fold diluted R2A agar. N60AT contained summed feature 3 (C16 : 1ω7c/C16 : 1ω6c), iso-C15 : 0 and iso-C17 : 0 3-OH as the major fatty acids and MK-7 as the predominant isoprenoid quinone. It contained phosphatidylethanolamine as the predominant polar lipid. The DNA G+C content was 44.4 mol%. Phylogenetic analysis based on 16S rRNA gene sequencing revealed that N60AT formed a separate lineage in the genus Mucilaginibacter and that it was most closely related to Mucilaginibacter frigoritolerans FT22T (96.5 % sequence similarity). Phenotypic, chemotaxonomic and phylogenetic characteristics supported the conclusion that N60AT represents a novel species of the genus Mucilaginibacter, for which the name Mucilaginibacter craterilacus sp. nov. is proposed. The type strain is N60AT (=KCTC 52404T=NRRL B-65396T).</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijsem.0.002043</identifier><identifier>PMID: 28820098</identifier><language>eng</language><publisher>England</publisher><subject>Bacterial Typing Techniques ; Bacteroidetes - classification ; Bacteroidetes - genetics ; Bacteroidetes - isolation & purification ; Base Composition ; DNA, Bacterial - genetics ; Fatty Acids - chemistry ; Geologic Sediments - microbiology ; Lakes - microbiology ; Phosphatidylethanolamines - chemistry ; Phylogeny ; Republic of Korea ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Soil Microbiology</subject><ispartof>International journal of systematic and evolutionary microbiology, 2017-08, Vol.67 (8), p.2891-2896</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c335t-1b0b09d12b080495e3f591295db6d2f20785a103b12d3a6cbd10da0c0f28066a3</citedby><cites>FETCH-LOGICAL-c335t-1b0b09d12b080495e3f591295db6d2f20785a103b12d3a6cbd10da0c0f28066a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,3733,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28820098$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lee, Keun Chul</creatorcontrib><creatorcontrib>Kim, Kwang Kyu</creatorcontrib><creatorcontrib>Eom, Mi Kyung</creatorcontrib><creatorcontrib>Kim, Jong-Shik</creatorcontrib><creatorcontrib>Kim, Dae-Shin</creatorcontrib><creatorcontrib>Ko, Suk-Hyung</creatorcontrib><creatorcontrib>Yang, Seung-Hoon</creatorcontrib><creatorcontrib>Lee, Jung-Sook</creatorcontrib><title>Mucilaginibacter craterilacus sp. nov., isolated from sediment soil of a crater lake</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>A novel bacterial strain, designated N60AT, was isolated from sediment soil of crater lake, Baekrokdam, Hallasan, Jeju, Republic of Korea. Cells of N60AT were Gram-reaction-negative, oxidase- and catalase-positive, non-motile rods and formed transparent white colonies on ten-fold diluted R2A agar. N60AT contained summed feature 3 (C16 : 1ω7c/C16 : 1ω6c), iso-C15 : 0 and iso-C17 : 0 3-OH as the major fatty acids and MK-7 as the predominant isoprenoid quinone. It contained phosphatidylethanolamine as the predominant polar lipid. The DNA G+C content was 44.4 mol%. Phylogenetic analysis based on 16S rRNA gene sequencing revealed that N60AT formed a separate lineage in the genus Mucilaginibacter and that it was most closely related to Mucilaginibacter frigoritolerans FT22T (96.5 % sequence similarity). Phenotypic, chemotaxonomic and phylogenetic characteristics supported the conclusion that N60AT represents a novel species of the genus Mucilaginibacter, for which the name Mucilaginibacter craterilacus sp. nov. is proposed. The type strain is N60AT (=KCTC 52404T=NRRL B-65396T).</description><subject>Bacterial Typing Techniques</subject><subject>Bacteroidetes - classification</subject><subject>Bacteroidetes - genetics</subject><subject>Bacteroidetes - isolation & purification</subject><subject>Base Composition</subject><subject>DNA, Bacterial - genetics</subject><subject>Fatty Acids - chemistry</subject><subject>Geologic Sediments - microbiology</subject><subject>Lakes - microbiology</subject><subject>Phosphatidylethanolamines - chemistry</subject><subject>Phylogeny</subject><subject>Republic of Korea</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Soil Microbiology</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo9kDtPwzAUhS0EoqWwMiKPDCRc23l5RBUvqYilzJafyCWJi50g8e8JtHQ6V-eec4YPoUsCOQHOb_0m2S6HHIBCwY7QnBRVlZXAiuPDTasZOktpAzAZAKdoRpuGAvBmjtYvo_atfPe9V1IPNmId5SSTp8eE0zbHffjKb7BPoZ0eBrsYOpys8Z3tB5yCb3FwWO57uJUf9hydONkme7HXBXp7uF8vn7LV6-Pz8m6VacbKISMKFHBDqIIGCl5a5kpOKC-Nqgx1FOqmlASYItQwWWllCBgJGhxtoKokW6Dr3e42hs_RpkF0PmnbtrK3YUyCcAZFXZO6maL5LqpjSClaJ7bRdzJ-CwLil6T4IylA7EhOhav99qg6aw7xf3TsB50pbvI</recordid><startdate>20170801</startdate><enddate>20170801</enddate><creator>Lee, Keun Chul</creator><creator>Kim, Kwang Kyu</creator><creator>Eom, Mi Kyung</creator><creator>Kim, Jong-Shik</creator><creator>Kim, Dae-Shin</creator><creator>Ko, Suk-Hyung</creator><creator>Yang, Seung-Hoon</creator><creator>Lee, Jung-Sook</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20170801</creationdate><title>Mucilaginibacter craterilacus sp. nov., isolated from sediment soil of a crater lake</title><author>Lee, Keun Chul ; Kim, Kwang Kyu ; Eom, Mi Kyung ; Kim, Jong-Shik ; Kim, Dae-Shin ; Ko, Suk-Hyung ; Yang, Seung-Hoon ; Lee, Jung-Sook</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c335t-1b0b09d12b080495e3f591295db6d2f20785a103b12d3a6cbd10da0c0f28066a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Bacterial Typing Techniques</topic><topic>Bacteroidetes - classification</topic><topic>Bacteroidetes - genetics</topic><topic>Bacteroidetes - isolation & purification</topic><topic>Base Composition</topic><topic>DNA, Bacterial - genetics</topic><topic>Fatty Acids - chemistry</topic><topic>Geologic Sediments - microbiology</topic><topic>Lakes - microbiology</topic><topic>Phosphatidylethanolamines - chemistry</topic><topic>Phylogeny</topic><topic>Republic of Korea</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Soil Microbiology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, Keun Chul</creatorcontrib><creatorcontrib>Kim, Kwang Kyu</creatorcontrib><creatorcontrib>Eom, Mi Kyung</creatorcontrib><creatorcontrib>Kim, Jong-Shik</creatorcontrib><creatorcontrib>Kim, Dae-Shin</creatorcontrib><creatorcontrib>Ko, Suk-Hyung</creatorcontrib><creatorcontrib>Yang, Seung-Hoon</creatorcontrib><creatorcontrib>Lee, Jung-Sook</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, Keun Chul</au><au>Kim, Kwang Kyu</au><au>Eom, Mi Kyung</au><au>Kim, Jong-Shik</au><au>Kim, Dae-Shin</au><au>Ko, Suk-Hyung</au><au>Yang, Seung-Hoon</au><au>Lee, Jung-Sook</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Mucilaginibacter craterilacus sp. nov., isolated from sediment soil of a crater lake</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2017-08-01</date><risdate>2017</risdate><volume>67</volume><issue>8</issue><spage>2891</spage><epage>2896</epage><pages>2891-2896</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>A novel bacterial strain, designated N60AT, was isolated from sediment soil of crater lake, Baekrokdam, Hallasan, Jeju, Republic of Korea. Cells of N60AT were Gram-reaction-negative, oxidase- and catalase-positive, non-motile rods and formed transparent white colonies on ten-fold diluted R2A agar. N60AT contained summed feature 3 (C16 : 1ω7c/C16 : 1ω6c), iso-C15 : 0 and iso-C17 : 0 3-OH as the major fatty acids and MK-7 as the predominant isoprenoid quinone. It contained phosphatidylethanolamine as the predominant polar lipid. The DNA G+C content was 44.4 mol%. Phylogenetic analysis based on 16S rRNA gene sequencing revealed that N60AT formed a separate lineage in the genus Mucilaginibacter and that it was most closely related to Mucilaginibacter frigoritolerans FT22T (96.5 % sequence similarity). Phenotypic, chemotaxonomic and phylogenetic characteristics supported the conclusion that N60AT represents a novel species of the genus Mucilaginibacter, for which the name Mucilaginibacter craterilacus sp. nov. is proposed. The type strain is N60AT (=KCTC 52404T=NRRL B-65396T).</abstract><cop>England</cop><pmid>28820098</pmid><doi>10.1099/ijsem.0.002043</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Bacterial Typing Techniques Bacteroidetes - classification Bacteroidetes - genetics Bacteroidetes - isolation & purification Base Composition DNA, Bacterial - genetics Fatty Acids - chemistry Geologic Sediments - microbiology Lakes - microbiology Phosphatidylethanolamines - chemistry Phylogeny Republic of Korea RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Soil Microbiology |
| title | Mucilaginibacter craterilacus sp. nov., isolated from sediment soil of a crater lake |
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