Pseudoalteromonas piratica sp. nov., a budding, prosthecate bacterium from diseased Montipora capitata, and emended description of the genus Pseudoalteromonas
A Gram-stain-negative, motile, rod-shaped bacterium designated OCN003T was cultivated from mucus taken from a diseased colony of the coral Montipora capitata in Kāne'ohe Bay, O'ahu, Hawai'i. Colonies of OCN003T were pale yellow, 1-3 mm in diameter, convex, smooth and entire. The strai...
Gespeichert in:
| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2017-08, Vol.67 (8), p.2683-2688 |
|---|---|
| Hauptverfasser: | , , , , , , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | 2688 |
|---|---|
| container_issue | 8 |
| container_start_page | 2683 |
| container_title | International journal of systematic and evolutionary microbiology |
| container_volume | 67 |
| creator | Beurmann, Silvia Ushijima, Blake Svoboda, Christina M Videau, Patrick Smith, Ashley M Donachie, Stuart P Aeby, Greta S Callahan, Sean M |
| description | A Gram-stain-negative, motile, rod-shaped bacterium designated OCN003T was cultivated from mucus taken from a diseased colony of the coral Montipora capitata in Kāne'ohe Bay, O'ahu, Hawai'i. Colonies of OCN003T were pale yellow, 1-3 mm in diameter, convex, smooth and entire. The strain was heterotrophic, strictly aerobic and strictly halophilic. Cells of OCN003T produced buds on peritrichous prosthecae. Growth occurred within the pH range of 5.5 to 10, and the temperature range of 14 to 39 °C. Major fatty acids were 16 : 1ω7c, 16 : 0, 18 : 1ω7c, 17 : 1ω8c, 12 : 0 3-OH and 17 : 0. Phylogenetic analysis of 1399 nucleotides of the 16S rRNA gene nucleotide sequence and a multi-locus sequence analysis of three genes placed OCN003T in the genus Pseudoalteromonas and indicated that the nearest relatives described are Pseudoalteromonas spongiae, P. luteoviolacea, P. ruthenica and P. phenolica(97-99 % sequence identity). The DNA G+C content of the strain's genome was 40.0 mol%. Based on in silico DNA-DNA hybridization and phenotypic differences from related type strains, we propose that OCN003T represents the type strain of a novel species in the genus Pseudoalteromonas, proposed as Pseudoalteromonas piratica sp. nov. OCN003T (=CCOS1042T=CIP 111189T). An emended description of the genus Pseudoalteromonas is presented. |
| doi_str_mv | 10.1099/ijsem.0.001995 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1927593723</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1927593723</sourcerecordid><originalsourceid>FETCH-LOGICAL-c335t-110660fc8408a25fc42835a84fdcb9c2d0b439b7c1306f55caf9f988567c22233</originalsourceid><addsrcrecordid>eNplkbtu3DAQRYkgRrx-tC4Dlil2ZT5ESSyDhV-Ag7hwamFEDm0aK1IRqQD5mXyrmV3HTaoZYM69mJlLyAVnFWdaX_qXhGPFKsa41uoDWfG6aTaKyfrjey-aY3KS0kth6oaxT-RYdK0WspUr8uch4WIj7DLOcYwBEp38DNkboGmqaIi_qjUFOizW-vC0ptMcU35GAxnpAKbI_DJSV8TU-oSQ0NJvMWQ_xRmogclnyFAsgqU4YrBlbjGZ2U_Zx0Cjo8WOPmFYEv1vmTNy5GCX8PytnpIf11eP29vN_febu-3X-42RUuUN56xpmDNdzToQypladFJBVztrBm2EZUMt9dAaLlnjlDLgtNNdp5rWCCGkPCVfDr7lvJ8LptyPPhnc7SBgXFLPtWiVlu0erQ6oKZ9IM7p-mv0I8--es_5vJv0-k571h0yK4POb9zKMaN_xfyHIV5XXi6g</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1927593723</pqid></control><display><type>article</type><title>Pseudoalteromonas piratica sp. nov., a budding, prosthecate bacterium from diseased Montipora capitata, and emended description of the genus Pseudoalteromonas</title><source>MEDLINE</source><source>Microbiology Society</source><source>EZB-FREE-00999 freely available EZB journals</source><source>Alma/SFX Local Collection</source><creator>Beurmann, Silvia ; Ushijima, Blake ; Svoboda, Christina M ; Videau, Patrick ; Smith, Ashley M ; Donachie, Stuart P ; Aeby, Greta S ; Callahan, Sean M</creator><creatorcontrib>Beurmann, Silvia ; Ushijima, Blake ; Svoboda, Christina M ; Videau, Patrick ; Smith, Ashley M ; Donachie, Stuart P ; Aeby, Greta S ; Callahan, Sean M</creatorcontrib><description>A Gram-stain-negative, motile, rod-shaped bacterium designated OCN003T was cultivated from mucus taken from a diseased colony of the coral Montipora capitata in Kāne'ohe Bay, O'ahu, Hawai'i. Colonies of OCN003T were pale yellow, 1-3 mm in diameter, convex, smooth and entire. The strain was heterotrophic, strictly aerobic and strictly halophilic. Cells of OCN003T produced buds on peritrichous prosthecae. Growth occurred within the pH range of 5.5 to 10, and the temperature range of 14 to 39 °C. Major fatty acids were 16 : 1ω7c, 16 : 0, 18 : 1ω7c, 17 : 1ω8c, 12 : 0 3-OH and 17 : 0. Phylogenetic analysis of 1399 nucleotides of the 16S rRNA gene nucleotide sequence and a multi-locus sequence analysis of three genes placed OCN003T in the genus Pseudoalteromonas and indicated that the nearest relatives described are Pseudoalteromonas spongiae, P. luteoviolacea, P. ruthenica and P. phenolica(97-99 % sequence identity). The DNA G+C content of the strain's genome was 40.0 mol%. Based on in silico DNA-DNA hybridization and phenotypic differences from related type strains, we propose that OCN003T represents the type strain of a novel species in the genus Pseudoalteromonas, proposed as Pseudoalteromonas piratica sp. nov. OCN003T (=CCOS1042T=CIP 111189T). An emended description of the genus Pseudoalteromonas is presented.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijsem.0.001995</identifier><identifier>PMID: 28792373</identifier><language>eng</language><publisher>England</publisher><subject>Animals ; Anthozoa - microbiology ; Bacterial Typing Techniques ; Base Composition ; DNA, Bacterial - genetics ; Fatty Acids - chemistry ; Hawaii ; Heterotrophic Processes ; Nucleic Acid Hybridization ; Phylogeny ; Pigmentation ; Pseudoalteromonas - classification ; Pseudoalteromonas - genetics ; Pseudoalteromonas - isolation & purification ; RNA, Ribosomal, 16S - genetics ; Seawater - microbiology ; Sequence Analysis, DNA</subject><ispartof>International journal of systematic and evolutionary microbiology, 2017-08, Vol.67 (8), p.2683-2688</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c335t-110660fc8408a25fc42835a84fdcb9c2d0b439b7c1306f55caf9f988567c22233</citedby><cites>FETCH-LOGICAL-c335t-110660fc8408a25fc42835a84fdcb9c2d0b439b7c1306f55caf9f988567c22233</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,3733,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28792373$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Beurmann, Silvia</creatorcontrib><creatorcontrib>Ushijima, Blake</creatorcontrib><creatorcontrib>Svoboda, Christina M</creatorcontrib><creatorcontrib>Videau, Patrick</creatorcontrib><creatorcontrib>Smith, Ashley M</creatorcontrib><creatorcontrib>Donachie, Stuart P</creatorcontrib><creatorcontrib>Aeby, Greta S</creatorcontrib><creatorcontrib>Callahan, Sean M</creatorcontrib><title>Pseudoalteromonas piratica sp. nov., a budding, prosthecate bacterium from diseased Montipora capitata, and emended description of the genus Pseudoalteromonas</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>A Gram-stain-negative, motile, rod-shaped bacterium designated OCN003T was cultivated from mucus taken from a diseased colony of the coral Montipora capitata in Kāne'ohe Bay, O'ahu, Hawai'i. Colonies of OCN003T were pale yellow, 1-3 mm in diameter, convex, smooth and entire. The strain was heterotrophic, strictly aerobic and strictly halophilic. Cells of OCN003T produced buds on peritrichous prosthecae. Growth occurred within the pH range of 5.5 to 10, and the temperature range of 14 to 39 °C. Major fatty acids were 16 : 1ω7c, 16 : 0, 18 : 1ω7c, 17 : 1ω8c, 12 : 0 3-OH and 17 : 0. Phylogenetic analysis of 1399 nucleotides of the 16S rRNA gene nucleotide sequence and a multi-locus sequence analysis of three genes placed OCN003T in the genus Pseudoalteromonas and indicated that the nearest relatives described are Pseudoalteromonas spongiae, P. luteoviolacea, P. ruthenica and P. phenolica(97-99 % sequence identity). The DNA G+C content of the strain's genome was 40.0 mol%. Based on in silico DNA-DNA hybridization and phenotypic differences from related type strains, we propose that OCN003T represents the type strain of a novel species in the genus Pseudoalteromonas, proposed as Pseudoalteromonas piratica sp. nov. OCN003T (=CCOS1042T=CIP 111189T). An emended description of the genus Pseudoalteromonas is presented.</description><subject>Animals</subject><subject>Anthozoa - microbiology</subject><subject>Bacterial Typing Techniques</subject><subject>Base Composition</subject><subject>DNA, Bacterial - genetics</subject><subject>Fatty Acids - chemistry</subject><subject>Hawaii</subject><subject>Heterotrophic Processes</subject><subject>Nucleic Acid Hybridization</subject><subject>Phylogeny</subject><subject>Pigmentation</subject><subject>Pseudoalteromonas - classification</subject><subject>Pseudoalteromonas - genetics</subject><subject>Pseudoalteromonas - isolation & purification</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Seawater - microbiology</subject><subject>Sequence Analysis, DNA</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNplkbtu3DAQRYkgRrx-tC4Dlil2ZT5ESSyDhV-Ag7hwamFEDm0aK1IRqQD5mXyrmV3HTaoZYM69mJlLyAVnFWdaX_qXhGPFKsa41uoDWfG6aTaKyfrjey-aY3KS0kth6oaxT-RYdK0WspUr8uch4WIj7DLOcYwBEp38DNkboGmqaIi_qjUFOizW-vC0ptMcU35GAxnpAKbI_DJSV8TU-oSQ0NJvMWQ_xRmogclnyFAsgqU4YrBlbjGZ2U_Zx0Cjo8WOPmFYEv1vmTNy5GCX8PytnpIf11eP29vN_febu-3X-42RUuUN56xpmDNdzToQypladFJBVztrBm2EZUMt9dAaLlnjlDLgtNNdp5rWCCGkPCVfDr7lvJ8LptyPPhnc7SBgXFLPtWiVlu0erQ6oKZ9IM7p-mv0I8--es_5vJv0-k571h0yK4POb9zKMaN_xfyHIV5XXi6g</recordid><startdate>20170801</startdate><enddate>20170801</enddate><creator>Beurmann, Silvia</creator><creator>Ushijima, Blake</creator><creator>Svoboda, Christina M</creator><creator>Videau, Patrick</creator><creator>Smith, Ashley M</creator><creator>Donachie, Stuart P</creator><creator>Aeby, Greta S</creator><creator>Callahan, Sean M</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20170801</creationdate><title>Pseudoalteromonas piratica sp. nov., a budding, prosthecate bacterium from diseased Montipora capitata, and emended description of the genus Pseudoalteromonas</title><author>Beurmann, Silvia ; Ushijima, Blake ; Svoboda, Christina M ; Videau, Patrick ; Smith, Ashley M ; Donachie, Stuart P ; Aeby, Greta S ; Callahan, Sean M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c335t-110660fc8408a25fc42835a84fdcb9c2d0b439b7c1306f55caf9f988567c22233</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Animals</topic><topic>Anthozoa - microbiology</topic><topic>Bacterial Typing Techniques</topic><topic>Base Composition</topic><topic>DNA, Bacterial - genetics</topic><topic>Fatty Acids - chemistry</topic><topic>Hawaii</topic><topic>Heterotrophic Processes</topic><topic>Nucleic Acid Hybridization</topic><topic>Phylogeny</topic><topic>Pigmentation</topic><topic>Pseudoalteromonas - classification</topic><topic>Pseudoalteromonas - genetics</topic><topic>Pseudoalteromonas - isolation & purification</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Seawater - microbiology</topic><topic>Sequence Analysis, DNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Beurmann, Silvia</creatorcontrib><creatorcontrib>Ushijima, Blake</creatorcontrib><creatorcontrib>Svoboda, Christina M</creatorcontrib><creatorcontrib>Videau, Patrick</creatorcontrib><creatorcontrib>Smith, Ashley M</creatorcontrib><creatorcontrib>Donachie, Stuart P</creatorcontrib><creatorcontrib>Aeby, Greta S</creatorcontrib><creatorcontrib>Callahan, Sean M</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Beurmann, Silvia</au><au>Ushijima, Blake</au><au>Svoboda, Christina M</au><au>Videau, Patrick</au><au>Smith, Ashley M</au><au>Donachie, Stuart P</au><au>Aeby, Greta S</au><au>Callahan, Sean M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Pseudoalteromonas piratica sp. nov., a budding, prosthecate bacterium from diseased Montipora capitata, and emended description of the genus Pseudoalteromonas</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2017-08-01</date><risdate>2017</risdate><volume>67</volume><issue>8</issue><spage>2683</spage><epage>2688</epage><pages>2683-2688</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>A Gram-stain-negative, motile, rod-shaped bacterium designated OCN003T was cultivated from mucus taken from a diseased colony of the coral Montipora capitata in Kāne'ohe Bay, O'ahu, Hawai'i. Colonies of OCN003T were pale yellow, 1-3 mm in diameter, convex, smooth and entire. The strain was heterotrophic, strictly aerobic and strictly halophilic. Cells of OCN003T produced buds on peritrichous prosthecae. Growth occurred within the pH range of 5.5 to 10, and the temperature range of 14 to 39 °C. Major fatty acids were 16 : 1ω7c, 16 : 0, 18 : 1ω7c, 17 : 1ω8c, 12 : 0 3-OH and 17 : 0. Phylogenetic analysis of 1399 nucleotides of the 16S rRNA gene nucleotide sequence and a multi-locus sequence analysis of three genes placed OCN003T in the genus Pseudoalteromonas and indicated that the nearest relatives described are Pseudoalteromonas spongiae, P. luteoviolacea, P. ruthenica and P. phenolica(97-99 % sequence identity). The DNA G+C content of the strain's genome was 40.0 mol%. Based on in silico DNA-DNA hybridization and phenotypic differences from related type strains, we propose that OCN003T represents the type strain of a novel species in the genus Pseudoalteromonas, proposed as Pseudoalteromonas piratica sp. nov. OCN003T (=CCOS1042T=CIP 111189T). An emended description of the genus Pseudoalteromonas is presented.</abstract><cop>England</cop><pmid>28792373</pmid><doi>10.1099/ijsem.0.001995</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 1466-5026 |
| ispartof | International journal of systematic and evolutionary microbiology, 2017-08, Vol.67 (8), p.2683-2688 |
| issn | 1466-5026 1466-5034 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_1927593723 |
| source | MEDLINE; Microbiology Society; EZB-FREE-00999 freely available EZB journals; Alma/SFX Local Collection |
| subjects | Animals Anthozoa - microbiology Bacterial Typing Techniques Base Composition DNA, Bacterial - genetics Fatty Acids - chemistry Hawaii Heterotrophic Processes Nucleic Acid Hybridization Phylogeny Pigmentation Pseudoalteromonas - classification Pseudoalteromonas - genetics Pseudoalteromonas - isolation & purification RNA, Ribosomal, 16S - genetics Seawater - microbiology Sequence Analysis, DNA |
| title | Pseudoalteromonas piratica sp. nov., a budding, prosthecate bacterium from diseased Montipora capitata, and emended description of the genus Pseudoalteromonas |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-08T01%3A52%3A55IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Pseudoalteromonas%20piratica%20sp.%20nov.,%20a%20budding,%20prosthecate%20bacterium%20from%20diseased%20Montipora%20capitata,%20and%20emended%20description%20of%20the%20genus%20Pseudoalteromonas&rft.jtitle=International%20journal%20of%20systematic%20and%20evolutionary%20microbiology&rft.au=Beurmann,%20Silvia&rft.date=2017-08-01&rft.volume=67&rft.issue=8&rft.spage=2683&rft.epage=2688&rft.pages=2683-2688&rft.issn=1466-5026&rft.eissn=1466-5034&rft_id=info:doi/10.1099/ijsem.0.001995&rft_dat=%3Cproquest_cross%3E1927593723%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1927593723&rft_id=info:pmid/28792373&rfr_iscdi=true |