Recombinant expression of Ixolaris, a Kunitz-type inhibitor from the tick salivary gland, for NMR studies
Ixolaris is an anticoagulant protein identified in the tick saliva of Ixodes scapularis. Ixolaris contains 2 Kunitz like domains and binds to Factor Xa or Factor X as a scaffold for inhibition of the Tissue Factor (TF)/Factor VIIa (FVIIa). In contrast to tissue factor pathway inhibitor (TFPI), howev...
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description | Ixolaris is an anticoagulant protein identified in the tick saliva of Ixodes scapularis. Ixolaris contains 2 Kunitz like domains and binds to Factor Xa or Factor X as a scaffold for inhibition of the Tissue Factor (TF)/Factor VIIa (FVIIa). In contrast to tissue factor pathway inhibitor (TFPI), however, Ixolaris does not bind to the active site cleft of FXa. Instead, complex formation is mediated by the FXa heparin-binding exosite. Due to its potent and long-lasting antithrombotic activity, Ixolaris is a promising agent for anticoagulant therapy. Although numerous functional studies of Ixolaris exist, three-dimensional structure of Ixolaris has not been obtained at atomic resolution. Using the pET32 vector, we successfully expressed a TRX-His6-Ixolaris fusion protein. By combining Ni-NTA chromatography, enterokinase protease cleavage, and reverse phase HPLC (RP-HPLC), we purified isotopically labeled Ixolaris for NMR studies. 1D 1H and 2D 15N–1H NMR analysis yielded high quality 2D 15N–1H HSQC spectra revealing that the recombinant protein is folded. These studies represent the first steps in obtaining high-resolution structural information by NMR for Ixolaris enabling the investigation of the molecular basis for Ixolaris-coagulation factors interactions.
•Full length Ixolaris and its isolated Kunitz-domains were expressed in E. Coli cells.•NMR analysis yielded high quality 2D 15N–1H HSQC spectra revealing that the recombinant proteins are folded.•E. coli and High Five expressed Ixolaris exhibited similar anticoagulant activity. |
doi_str_mv | 10.1016/j.pep.2017.07.012 |
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•Full length Ixolaris and its isolated Kunitz-domains were expressed in E. Coli cells.•NMR analysis yielded high quality 2D 15N–1H HSQC spectra revealing that the recombinant proteins are folded.•E. coli and High Five expressed Ixolaris exhibited similar anticoagulant activity.</description><identifier>ISSN: 1046-5928</identifier><identifier>EISSN: 1096-0279</identifier><identifier>DOI: 10.1016/j.pep.2017.07.012</identifier><identifier>PMID: 28734839</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Anticoagulant ; Anticoagulants - chemistry ; Anticoagulants - metabolism ; Cloning, Molecular ; Escherichia coli - genetics ; Factor Xa ; Histidine - genetics ; Ixolaris ; NMR ; Nuclear Magnetic Resonance, Biomolecular ; Oligopeptides - genetics ; Recombinant Fusion Proteins - chemistry ; Recombinant Fusion Proteins - genetics ; Recombinant Fusion Proteins - metabolism ; Salivary Glands - chemistry ; Salivary Proteins and Peptides - chemistry ; Salivary Proteins and Peptides - genetics ; Salivary Proteins and Peptides - metabolism ; Tick saliva ; Tissue factor</subject><ispartof>Protein expression and purification, 2017-11, Vol.139, p.49-56</ispartof><rights>2017 Elsevier Inc.</rights><rights>Copyright © 2017 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c353t-7dd8a2ea3f34d9a1446ae085a13da64fc87689eb2d64eec8dd6d1dcd79e4215a3</citedby><cites>FETCH-LOGICAL-c353t-7dd8a2ea3f34d9a1446ae085a13da64fc87689eb2d64eec8dd6d1dcd79e4215a3</cites><orcidid>0000-0001-7219-1123 ; 0000-0002-5764-5454 ; 0000-0002-5260-2332 ; 0000-0002-2577-4235</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S1046592817303558$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65534</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28734839$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>De Paula, V.S.</creatorcontrib><creatorcontrib>Silva, F.H.S.</creatorcontrib><creatorcontrib>Francischetti, I.M.B.</creatorcontrib><creatorcontrib>Monteiro, R.Q.</creatorcontrib><creatorcontrib>Valente, A.P.</creatorcontrib><title>Recombinant expression of Ixolaris, a Kunitz-type inhibitor from the tick salivary gland, for NMR studies</title><title>Protein expression and purification</title><addtitle>Protein Expr Purif</addtitle><description>Ixolaris is an anticoagulant protein identified in the tick saliva of Ixodes scapularis. Ixolaris contains 2 Kunitz like domains and binds to Factor Xa or Factor X as a scaffold for inhibition of the Tissue Factor (TF)/Factor VIIa (FVIIa). In contrast to tissue factor pathway inhibitor (TFPI), however, Ixolaris does not bind to the active site cleft of FXa. Instead, complex formation is mediated by the FXa heparin-binding exosite. Due to its potent and long-lasting antithrombotic activity, Ixolaris is a promising agent for anticoagulant therapy. Although numerous functional studies of Ixolaris exist, three-dimensional structure of Ixolaris has not been obtained at atomic resolution. Using the pET32 vector, we successfully expressed a TRX-His6-Ixolaris fusion protein. By combining Ni-NTA chromatography, enterokinase protease cleavage, and reverse phase HPLC (RP-HPLC), we purified isotopically labeled Ixolaris for NMR studies. 1D 1H and 2D 15N–1H NMR analysis yielded high quality 2D 15N–1H HSQC spectra revealing that the recombinant protein is folded. These studies represent the first steps in obtaining high-resolution structural information by NMR for Ixolaris enabling the investigation of the molecular basis for Ixolaris-coagulation factors interactions.
•Full length Ixolaris and its isolated Kunitz-domains were expressed in E. Coli cells.•NMR analysis yielded high quality 2D 15N–1H HSQC spectra revealing that the recombinant proteins are folded.•E. coli and High Five expressed Ixolaris exhibited similar anticoagulant activity.</description><subject>Anticoagulant</subject><subject>Anticoagulants - chemistry</subject><subject>Anticoagulants - metabolism</subject><subject>Cloning, Molecular</subject><subject>Escherichia coli - genetics</subject><subject>Factor Xa</subject><subject>Histidine - genetics</subject><subject>Ixolaris</subject><subject>NMR</subject><subject>Nuclear Magnetic Resonance, Biomolecular</subject><subject>Oligopeptides - genetics</subject><subject>Recombinant Fusion Proteins - chemistry</subject><subject>Recombinant Fusion Proteins - genetics</subject><subject>Recombinant Fusion Proteins - metabolism</subject><subject>Salivary Glands - chemistry</subject><subject>Salivary Proteins and Peptides - chemistry</subject><subject>Salivary Proteins and Peptides - genetics</subject><subject>Salivary Proteins and Peptides - metabolism</subject><subject>Tick saliva</subject><subject>Tissue factor</subject><issn>1046-5928</issn><issn>1096-0279</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kEtP3TAQha2qVXm0P6Ab5GUX5NaPxInFqkIUELSVULu2fO1JmUsSp7aDoL8eX11gWWmkmcV3juYcQj5xtuKMqy-b1QzzSjDerlgZLt6Qfc60qpho9dvtXauq0aLbIwcpbRjjXLHmPdkTXSvrTup9gjfgwrjGyU6ZwsMcISUMEw09vXwIg42YjqmlV8uE-V-VH2egON3iGnOItI9hpPkWaEZ3R5Md8N7GR_pnsJM_pn0hfny_oSkvHiF9IO96OyT4-LwPye9vZ79OL6rrn-eXp1-vKycbmavW-84KsLKXtdeW17WywLrGcumtqnvXtarTsBZe1QCu81557p1vNdSCN1Yeks873zmGvwukbEZMDobyFIQlGa6F5Ezpti0o36EuhpQi9GaOOJYIhjOzbdhsTGnYbBs2rAwXRXP0bL-sR_CvipdKC3CyA6CEvEeIJjmEyYHHCC4bH_A_9k_aQ42J</recordid><startdate>201711</startdate><enddate>201711</enddate><creator>De Paula, V.S.</creator><creator>Silva, F.H.S.</creator><creator>Francischetti, I.M.B.</creator><creator>Monteiro, R.Q.</creator><creator>Valente, A.P.</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-7219-1123</orcidid><orcidid>https://orcid.org/0000-0002-5764-5454</orcidid><orcidid>https://orcid.org/0000-0002-5260-2332</orcidid><orcidid>https://orcid.org/0000-0002-2577-4235</orcidid></search><sort><creationdate>201711</creationdate><title>Recombinant expression of Ixolaris, a Kunitz-type inhibitor from the tick salivary gland, for NMR studies</title><author>De Paula, V.S. ; Silva, F.H.S. ; Francischetti, I.M.B. ; Monteiro, R.Q. ; Valente, A.P.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c353t-7dd8a2ea3f34d9a1446ae085a13da64fc87689eb2d64eec8dd6d1dcd79e4215a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Anticoagulant</topic><topic>Anticoagulants - chemistry</topic><topic>Anticoagulants - metabolism</topic><topic>Cloning, Molecular</topic><topic>Escherichia coli - genetics</topic><topic>Factor Xa</topic><topic>Histidine - genetics</topic><topic>Ixolaris</topic><topic>NMR</topic><topic>Nuclear Magnetic Resonance, Biomolecular</topic><topic>Oligopeptides - genetics</topic><topic>Recombinant Fusion Proteins - chemistry</topic><topic>Recombinant Fusion Proteins - genetics</topic><topic>Recombinant Fusion Proteins - metabolism</topic><topic>Salivary Glands - chemistry</topic><topic>Salivary Proteins and Peptides - chemistry</topic><topic>Salivary Proteins and Peptides - genetics</topic><topic>Salivary Proteins and Peptides - metabolism</topic><topic>Tick saliva</topic><topic>Tissue factor</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>De Paula, V.S.</creatorcontrib><creatorcontrib>Silva, F.H.S.</creatorcontrib><creatorcontrib>Francischetti, I.M.B.</creatorcontrib><creatorcontrib>Monteiro, R.Q.</creatorcontrib><creatorcontrib>Valente, A.P.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Protein expression and purification</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>De Paula, V.S.</au><au>Silva, F.H.S.</au><au>Francischetti, I.M.B.</au><au>Monteiro, R.Q.</au><au>Valente, A.P.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Recombinant expression of Ixolaris, a Kunitz-type inhibitor from the tick salivary gland, for NMR studies</atitle><jtitle>Protein expression and purification</jtitle><addtitle>Protein Expr Purif</addtitle><date>2017-11</date><risdate>2017</risdate><volume>139</volume><spage>49</spage><epage>56</epage><pages>49-56</pages><issn>1046-5928</issn><eissn>1096-0279</eissn><abstract>Ixolaris is an anticoagulant protein identified in the tick saliva of Ixodes scapularis. Ixolaris contains 2 Kunitz like domains and binds to Factor Xa or Factor X as a scaffold for inhibition of the Tissue Factor (TF)/Factor VIIa (FVIIa). In contrast to tissue factor pathway inhibitor (TFPI), however, Ixolaris does not bind to the active site cleft of FXa. Instead, complex formation is mediated by the FXa heparin-binding exosite. Due to its potent and long-lasting antithrombotic activity, Ixolaris is a promising agent for anticoagulant therapy. Although numerous functional studies of Ixolaris exist, three-dimensional structure of Ixolaris has not been obtained at atomic resolution. Using the pET32 vector, we successfully expressed a TRX-His6-Ixolaris fusion protein. By combining Ni-NTA chromatography, enterokinase protease cleavage, and reverse phase HPLC (RP-HPLC), we purified isotopically labeled Ixolaris for NMR studies. 1D 1H and 2D 15N–1H NMR analysis yielded high quality 2D 15N–1H HSQC spectra revealing that the recombinant protein is folded. These studies represent the first steps in obtaining high-resolution structural information by NMR for Ixolaris enabling the investigation of the molecular basis for Ixolaris-coagulation factors interactions.
•Full length Ixolaris and its isolated Kunitz-domains were expressed in E. Coli cells.•NMR analysis yielded high quality 2D 15N–1H HSQC spectra revealing that the recombinant proteins are folded.•E. coli and High Five expressed Ixolaris exhibited similar anticoagulant activity.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>28734839</pmid><doi>10.1016/j.pep.2017.07.012</doi><tpages>8</tpages><orcidid>https://orcid.org/0000-0001-7219-1123</orcidid><orcidid>https://orcid.org/0000-0002-5764-5454</orcidid><orcidid>https://orcid.org/0000-0002-5260-2332</orcidid><orcidid>https://orcid.org/0000-0002-2577-4235</orcidid></addata></record> |
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subjects | Anticoagulant Anticoagulants - chemistry Anticoagulants - metabolism Cloning, Molecular Escherichia coli - genetics Factor Xa Histidine - genetics Ixolaris NMR Nuclear Magnetic Resonance, Biomolecular Oligopeptides - genetics Recombinant Fusion Proteins - chemistry Recombinant Fusion Proteins - genetics Recombinant Fusion Proteins - metabolism Salivary Glands - chemistry Salivary Proteins and Peptides - chemistry Salivary Proteins and Peptides - genetics Salivary Proteins and Peptides - metabolism Tick saliva Tissue factor |
title | Recombinant expression of Ixolaris, a Kunitz-type inhibitor from the tick salivary gland, for NMR studies |
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