Gold Nanoparticle Loaded Split-DNAzyme Probe for Amplified miRNA Detection in Living Cells
A new class of intracellular nanoprobe, termed AuNP loaded split-DNAzyme probe, was developed to sense miRNA in living cells. Briefly, it consists of an AuNP and substrates hybridized with two half of split DNAzymes. In the absence of target miRNA, the split DNAzymes form an inactive DNAzyme motif w...
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Veröffentlicht in: | Analytical chemistry (Washington) 2017-08, Vol.89 (16), p.8377-8383 |
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creator | Wu, Yanan Huang, Jin Yang, Xiaohai Yang, Yanjing Quan, Ke Xie, Nuli Li, Jing Ma, Changbei Wang, Kemin |
description | A new class of intracellular nanoprobe, termed AuNP loaded split-DNAzyme probe, was developed to sense miRNA in living cells. Briefly, it consists of an AuNP and substrates hybridized with two half of split DNAzymes. In the absence of target miRNA, the split DNAzymes form an inactive DNAzyme motif with their substrate through partial paring at the end of each strand, and the fluorescence is quenched. Inside the cells, the target miRNA binds with both of the two half of split DNAzymes, forming the active secondary structure in the catalytic cores, which can cleave the substrates, resulting in the rupture of the substrate and recovery of the fluorescence. Meanwhile, the target is released and binds to another inactive DNAzyme motif to drive another cycle of activation. During the cyclic process, a very small number of target miRNAs can initiate the cleavage of many fluorophore-labeled substrate strands from AuNP surface, providing an amplified fluorescent signal of the target miRNA and, thus, offering high detection sensitivity. |
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Briefly, it consists of an AuNP and substrates hybridized with two half of split DNAzymes. In the absence of target miRNA, the split DNAzymes form an inactive DNAzyme motif with their substrate through partial paring at the end of each strand, and the fluorescence is quenched. Inside the cells, the target miRNA binds with both of the two half of split DNAzymes, forming the active secondary structure in the catalytic cores, which can cleave the substrates, resulting in the rupture of the substrate and recovery of the fluorescence. Meanwhile, the target is released and binds to another inactive DNAzyme motif to drive another cycle of activation. During the cyclic process, a very small number of target miRNAs can initiate the cleavage of many fluorophore-labeled substrate strands from AuNP surface, providing an amplified fluorescent signal of the target miRNA and, thus, offering high detection sensitivity.</description><identifier>ISSN: 0003-2700</identifier><identifier>EISSN: 1520-6882</identifier><identifier>DOI: 10.1021/acs.analchem.7b01632</identifier><identifier>PMID: 28718626</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Catalysis ; Cells ; Cells (biology) ; Chemistry ; Cores ; Deoxyribonucleic acid ; DNA ; Enzymes ; Fluorescence ; Gold ; Hybridization ; miRNA ; Nanoparticles ; Protein structure ; Quenching ; Ribonucleic acid ; RNA ; Secondary structure ; Substrates</subject><ispartof>Analytical chemistry (Washington), 2017-08, Vol.89 (16), p.8377-8383</ispartof><rights>Copyright © 2017 American Chemical Society</rights><rights>Copyright American Chemical Society Aug 15, 2017</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a376t-98ed183cd0dd2a7bf4bb0c487459b4b6fb2d5546fe18ad5a51259aa0f0d7fd403</citedby><cites>FETCH-LOGICAL-a376t-98ed183cd0dd2a7bf4bb0c487459b4b6fb2d5546fe18ad5a51259aa0f0d7fd403</cites><orcidid>0000-0001-8122-7140 ; 0000-0001-9390-4938</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/acs.analchem.7b01632$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/acs.analchem.7b01632$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>315,781,785,2766,27080,27928,27929,56742,56792</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28718626$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wu, Yanan</creatorcontrib><creatorcontrib>Huang, Jin</creatorcontrib><creatorcontrib>Yang, Xiaohai</creatorcontrib><creatorcontrib>Yang, Yanjing</creatorcontrib><creatorcontrib>Quan, Ke</creatorcontrib><creatorcontrib>Xie, Nuli</creatorcontrib><creatorcontrib>Li, Jing</creatorcontrib><creatorcontrib>Ma, Changbei</creatorcontrib><creatorcontrib>Wang, Kemin</creatorcontrib><title>Gold Nanoparticle Loaded Split-DNAzyme Probe for Amplified miRNA Detection in Living Cells</title><title>Analytical chemistry (Washington)</title><addtitle>Anal. Chem</addtitle><description>A new class of intracellular nanoprobe, termed AuNP loaded split-DNAzyme probe, was developed to sense miRNA in living cells. Briefly, it consists of an AuNP and substrates hybridized with two half of split DNAzymes. In the absence of target miRNA, the split DNAzymes form an inactive DNAzyme motif with their substrate through partial paring at the end of each strand, and the fluorescence is quenched. Inside the cells, the target miRNA binds with both of the two half of split DNAzymes, forming the active secondary structure in the catalytic cores, which can cleave the substrates, resulting in the rupture of the substrate and recovery of the fluorescence. Meanwhile, the target is released and binds to another inactive DNAzyme motif to drive another cycle of activation. During the cyclic process, a very small number of target miRNAs can initiate the cleavage of many fluorophore-labeled substrate strands from AuNP surface, providing an amplified fluorescent signal of the target miRNA and, thus, offering high detection sensitivity.</description><subject>Catalysis</subject><subject>Cells</subject><subject>Cells (biology)</subject><subject>Chemistry</subject><subject>Cores</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>Enzymes</subject><subject>Fluorescence</subject><subject>Gold</subject><subject>Hybridization</subject><subject>miRNA</subject><subject>Nanoparticles</subject><subject>Protein structure</subject><subject>Quenching</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>Secondary structure</subject><subject>Substrates</subject><issn>0003-2700</issn><issn>1520-6882</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><recordid>eNp9kE1rGzEQhkVpaBy3_yAUQS-5rDuj1a7ko3E-wTghbS-9LNJKShV2V660DiS_PjJ2WuihpznM874zPIScIswQGH5VbZqpQXXtL9vPhAasS_aOTLBiUNRSsvdkAgBlwQTAMTlJ6REAMWMfyDGTAmXN6gn5eRU6Q9dqCBsVR992lq6CMtbQb5vOj8X5evHy3Ft6F4O21IVIF31eOJ-J3t-vF_TcjrYdfRioH-jKP_nhgS5t16WP5MipLtlPhzklPy4vvi-vi9Xt1c1ysSpUKeqxmEtrUJatAWOYEtpxraHlUvBqrrmunWamqnjtLEplKlUhq-ZKgQMjnOFQTsnZvncTw--tTWPT-9TmD9RgwzY1OGeITIgsaEq-_IM-hm3MEncUR4Gs5jJTfE-1MaQUrWs20fcqPjcIzc59k903b-6bg_sc-3wo3-remj-hN9kZgD2wi_89_L_OVwjokjk</recordid><startdate>20170815</startdate><enddate>20170815</enddate><creator>Wu, Yanan</creator><creator>Huang, Jin</creator><creator>Yang, Xiaohai</creator><creator>Yang, Yanjing</creator><creator>Quan, Ke</creator><creator>Xie, Nuli</creator><creator>Li, Jing</creator><creator>Ma, Changbei</creator><creator>Wang, Kemin</creator><general>American Chemical Society</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QF</scope><scope>7QO</scope><scope>7QQ</scope><scope>7SC</scope><scope>7SE</scope><scope>7SP</scope><scope>7SR</scope><scope>7TA</scope><scope>7TB</scope><scope>7TM</scope><scope>7U5</scope><scope>7U7</scope><scope>7U9</scope><scope>8BQ</scope><scope>8FD</scope><scope>C1K</scope><scope>F28</scope><scope>FR3</scope><scope>H8D</scope><scope>H8G</scope><scope>H94</scope><scope>JG9</scope><scope>JQ2</scope><scope>KR7</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><scope>P64</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-8122-7140</orcidid><orcidid>https://orcid.org/0000-0001-9390-4938</orcidid></search><sort><creationdate>20170815</creationdate><title>Gold Nanoparticle Loaded Split-DNAzyme Probe for Amplified miRNA Detection in Living Cells</title><author>Wu, Yanan ; Huang, Jin ; Yang, Xiaohai ; Yang, Yanjing ; Quan, Ke ; Xie, Nuli ; Li, Jing ; Ma, Changbei ; Wang, Kemin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a376t-98ed183cd0dd2a7bf4bb0c487459b4b6fb2d5546fe18ad5a51259aa0f0d7fd403</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Catalysis</topic><topic>Cells</topic><topic>Cells (biology)</topic><topic>Chemistry</topic><topic>Cores</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>Enzymes</topic><topic>Fluorescence</topic><topic>Gold</topic><topic>Hybridization</topic><topic>miRNA</topic><topic>Nanoparticles</topic><topic>Protein structure</topic><topic>Quenching</topic><topic>Ribonucleic acid</topic><topic>RNA</topic><topic>Secondary structure</topic><topic>Substrates</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wu, Yanan</creatorcontrib><creatorcontrib>Huang, Jin</creatorcontrib><creatorcontrib>Yang, Xiaohai</creatorcontrib><creatorcontrib>Yang, Yanjing</creatorcontrib><creatorcontrib>Quan, Ke</creatorcontrib><creatorcontrib>Xie, Nuli</creatorcontrib><creatorcontrib>Li, Jing</creatorcontrib><creatorcontrib>Ma, Changbei</creatorcontrib><creatorcontrib>Wang, Kemin</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Aluminium Industry Abstracts</collection><collection>Biotechnology Research Abstracts</collection><collection>Ceramic Abstracts</collection><collection>Computer and Information Systems Abstracts</collection><collection>Corrosion Abstracts</collection><collection>Electronics & Communications Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Materials Business File</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ANTE: Abstracts in New Technology & Engineering</collection><collection>Engineering Research Database</collection><collection>Aerospace Database</collection><collection>Copper Technical Reference Library</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Materials Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>Civil Engineering Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Analytical chemistry (Washington)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wu, Yanan</au><au>Huang, Jin</au><au>Yang, Xiaohai</au><au>Yang, Yanjing</au><au>Quan, Ke</au><au>Xie, Nuli</au><au>Li, Jing</au><au>Ma, Changbei</au><au>Wang, Kemin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Gold Nanoparticle Loaded Split-DNAzyme Probe for Amplified miRNA Detection in Living Cells</atitle><jtitle>Analytical chemistry (Washington)</jtitle><addtitle>Anal. Chem</addtitle><date>2017-08-15</date><risdate>2017</risdate><volume>89</volume><issue>16</issue><spage>8377</spage><epage>8383</epage><pages>8377-8383</pages><issn>0003-2700</issn><eissn>1520-6882</eissn><abstract>A new class of intracellular nanoprobe, termed AuNP loaded split-DNAzyme probe, was developed to sense miRNA in living cells. Briefly, it consists of an AuNP and substrates hybridized with two half of split DNAzymes. In the absence of target miRNA, the split DNAzymes form an inactive DNAzyme motif with their substrate through partial paring at the end of each strand, and the fluorescence is quenched. Inside the cells, the target miRNA binds with both of the two half of split DNAzymes, forming the active secondary structure in the catalytic cores, which can cleave the substrates, resulting in the rupture of the substrate and recovery of the fluorescence. Meanwhile, the target is released and binds to another inactive DNAzyme motif to drive another cycle of activation. 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subjects | Catalysis Cells Cells (biology) Chemistry Cores Deoxyribonucleic acid DNA Enzymes Fluorescence Gold Hybridization miRNA Nanoparticles Protein structure Quenching Ribonucleic acid RNA Secondary structure Substrates |
title | Gold Nanoparticle Loaded Split-DNAzyme Probe for Amplified miRNA Detection in Living Cells |
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