Mapping stripe rust resistance gene YrZH22 in Chinese wheat cultivar Zhoumai 22 by bulked segregant RNA-Seq (BSR-Seq) and comparative genomics analyses
Key message A stripe rust resistance gene YrZH22 was mapped by combined BSR-Seq and comparative genomics analyses to a 5.92 centimorgan (cM) genetic interval spanning a 4 Mb physical genomic region on wheat chromosome 4BL1. Stripe rust, caused by Puccinia striiformis f. sp. tritici (PST), is one of...
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| Veröffentlicht in: | Theoretical and applied genetics 2017-10, Vol.130 (10), p.2191-2201 |
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| creator | Wang, Yong Xie, Jingzhong Zhang, Huaizhi Guo, Bingmin Ning, Shunzong Chen, Yongxing Lu, Ping Wu, Qiuhong Li, Miaomiao Zhang, Deyun Guo, Guanghao Zhang, Yan Liu, Dengcai Zou, Shaokui Tang, Jianwei Zhao, Hong Wang, Xicheng Li, Jun Yang, Wuyun Cao, Tingjie Yin, Guihong Liu, Zhiyong |
| description | Key message
A stripe rust resistance gene YrZH22 was mapped by combined BSR-Seq and comparative genomics analyses to a 5.92 centimorgan (cM) genetic interval spanning a 4 Mb physical genomic region on wheat chromosome 4BL1.
Stripe rust, caused by
Puccinia striiformis
f. sp.
tritici
(PST), is one of the most destructive diseases of wheat and severely threatens wheat production worldwide. The widely grown Chinese wheat cultivar Zhoumai 22 is highly resistant to the current prevailing PST race CYR34 (V26). Genetic analysis of F
5:6
and F
6:7
recombinant inbred line (RIL) populations indicated that adult-plant stripe rust resistance in Zhoumai 22 is controlled by a single gene, temporarily designated
YrZH22
. By applying bulked segregant RNA-Seq (BSR-Seq), 7 SNP markers were developed and SNP mapping showed that
YrZH22
is located between markers
WGGB105
and
WGGB112
on chromosome arm 4BL. The corresponding genomic regions of the Chinese Spring 4BL genome assembly and physical map of
Aegilops tauschii
4DL were selected for comparative genomics analyses to develop nine new polymorphic markers that were used to construct a high-resolution genetic linkage map of
YrZH22
.
YrZH22
was delimited in a 5.92 cM genetic interval between markers
WGGB133
and
WGGB146
, corresponding to 4.1 Mb genomic interval in Chinese Spring 4BL and a 2.2 Mb orthologous genomic region in
Ae. tauschii
4DL. The genetic linkage map of
YrZH22
will be valuable for fine mapping and positional cloning of
YrZH22
, and can be used for marker-assisted selection in wheat breeding. |
| doi_str_mv | 10.1007/s00122-017-2950-0 |
| format | Article |
| fullrecord | <record><control><sourceid>gale_proqu</sourceid><recordid>TN_cdi_proquest_miscellaneous_1920203784</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A505685673</galeid><sourcerecordid>A505685673</sourcerecordid><originalsourceid>FETCH-LOGICAL-c439t-da5d26b253671199ca618b9894dae428d4ca651373e862d3a6d555197aec67663</originalsourceid><addsrcrecordid>eNp1ks9u1DAQxiMEokvhAbggS1zaQ8rYjp3kuF1RilRAauFAL5bXns26JE5qJ6B9El4Xhy1_BfLB1sxvPs_YX5Y9pXBCAcoXEYAylgMtc1YLyOFetqAFZzljBbufLQAKyEUp2EH2KMYbAGAC-MPsgFUlpbWQi-zrGz0MzjckjsENSMIURxIwujhqb5A06JF8DNfnjBHnyWrrPEYkX7aoR2KmdnSfdSDX237qtCMJWu_Iemo_oSURm4CN9iO5fLvMr_CWHJ1eXc6HY6K9JabvBh10Uvh-Td85E1NCt7uI8XH2YKPbiE_u9sPsw9nL96vz_OLdq9er5UVuCl6PudXCMrlmgst5otpoSat1XdWF1ViwyhYpIigvOVaSWa6lFULQutRoZCklP8yO9rpD6G8njKPqXDTYttpjP0VFawYMeFkVCX3-F3rTTyH1O1MFVLymVfmLanSLyvlNPwZtZlG1FCBkJWTJE3XyDyoti-kZeo8bl-J_FNB9gQl9jAE3agiu02GnKKjZDGpvBpXMoGYzKEg1z-4antYd2p8VP34_AWwPxJTyDYbfJvqv6jfjeLxJ</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1940839187</pqid></control><display><type>article</type><title>Mapping stripe rust resistance gene YrZH22 in Chinese wheat cultivar Zhoumai 22 by bulked segregant RNA-Seq (BSR-Seq) and comparative genomics analyses</title><source>MEDLINE</source><source>SpringerLink Journals - AutoHoldings</source><creator>Wang, Yong ; Xie, Jingzhong ; Zhang, Huaizhi ; Guo, Bingmin ; Ning, Shunzong ; Chen, Yongxing ; Lu, Ping ; Wu, Qiuhong ; Li, Miaomiao ; Zhang, Deyun ; Guo, Guanghao ; Zhang, Yan ; Liu, Dengcai ; Zou, Shaokui ; Tang, Jianwei ; Zhao, Hong ; Wang, Xicheng ; Li, Jun ; Yang, Wuyun ; Cao, Tingjie ; Yin, Guihong ; Liu, Zhiyong</creator><creatorcontrib>Wang, Yong ; Xie, Jingzhong ; Zhang, Huaizhi ; Guo, Bingmin ; Ning, Shunzong ; Chen, Yongxing ; Lu, Ping ; Wu, Qiuhong ; Li, Miaomiao ; Zhang, Deyun ; Guo, Guanghao ; Zhang, Yan ; Liu, Dengcai ; Zou, Shaokui ; Tang, Jianwei ; Zhao, Hong ; Wang, Xicheng ; Li, Jun ; Yang, Wuyun ; Cao, Tingjie ; Yin, Guihong ; Liu, Zhiyong</creatorcontrib><description>Key message
A stripe rust resistance gene YrZH22 was mapped by combined BSR-Seq and comparative genomics analyses to a 5.92 centimorgan (cM) genetic interval spanning a 4 Mb physical genomic region on wheat chromosome 4BL1.
Stripe rust, caused by
Puccinia striiformis
f. sp.
tritici
(PST), is one of the most destructive diseases of wheat and severely threatens wheat production worldwide. The widely grown Chinese wheat cultivar Zhoumai 22 is highly resistant to the current prevailing PST race CYR34 (V26). Genetic analysis of F
5:6
and F
6:7
recombinant inbred line (RIL) populations indicated that adult-plant stripe rust resistance in Zhoumai 22 is controlled by a single gene, temporarily designated
YrZH22
. By applying bulked segregant RNA-Seq (BSR-Seq), 7 SNP markers were developed and SNP mapping showed that
YrZH22
is located between markers
WGGB105
and
WGGB112
on chromosome arm 4BL. The corresponding genomic regions of the Chinese Spring 4BL genome assembly and physical map of
Aegilops tauschii
4DL were selected for comparative genomics analyses to develop nine new polymorphic markers that were used to construct a high-resolution genetic linkage map of
YrZH22
.
YrZH22
was delimited in a 5.92 cM genetic interval between markers
WGGB133
and
WGGB146
, corresponding to 4.1 Mb genomic interval in Chinese Spring 4BL and a 2.2 Mb orthologous genomic region in
Ae. tauschii
4DL. The genetic linkage map of
YrZH22
will be valuable for fine mapping and positional cloning of
YrZH22
, and can be used for marker-assisted selection in wheat breeding.</description><identifier>ISSN: 0040-5752</identifier><identifier>EISSN: 1432-2242</identifier><identifier>DOI: 10.1007/s00122-017-2950-0</identifier><identifier>PMID: 28711956</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Agricultural production ; Agriculture ; Basidiomycota ; Biochemistry ; Biomedical and Life Sciences ; Biotechnology ; Breeding ; China ; Chromosome Mapping ; Cloning ; Comparative Genomic Hybridization ; Disease resistance (Plants) ; Disease Resistance - genetics ; Gene mapping ; Genetic analysis ; Genetic aspects ; Genetic Linkage ; Genomics ; Genotype & phenotype ; Inbreeding ; Life Sciences ; Marker-assisted selection ; Methods ; Original Article ; Plant Biochemistry ; Plant Breeding ; Plant Breeding/Biotechnology ; Plant Diseases - genetics ; Plant Diseases - microbiology ; Plant fungal diseases ; Plant Genetics and Genomics ; Polymorphism, Single Nucleotide ; Prevention ; Ribonucleic acid ; RNA ; RNA sequencing ; Rusting ; Single-nucleotide polymorphism ; Stripe rust ; Triticum - genetics ; Triticum - microbiology ; Wheat</subject><ispartof>Theoretical and applied genetics, 2017-10, Vol.130 (10), p.2191-2201</ispartof><rights>Springer-Verlag GmbH Germany 2017</rights><rights>COPYRIGHT 2017 Springer</rights><rights>Theoretical and Applied Genetics is a copyright of Springer, 2017.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c439t-da5d26b253671199ca618b9894dae428d4ca651373e862d3a6d555197aec67663</citedby><cites>FETCH-LOGICAL-c439t-da5d26b253671199ca618b9894dae428d4ca651373e862d3a6d555197aec67663</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00122-017-2950-0$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00122-017-2950-0$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28711956$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wang, Yong</creatorcontrib><creatorcontrib>Xie, Jingzhong</creatorcontrib><creatorcontrib>Zhang, Huaizhi</creatorcontrib><creatorcontrib>Guo, Bingmin</creatorcontrib><creatorcontrib>Ning, Shunzong</creatorcontrib><creatorcontrib>Chen, Yongxing</creatorcontrib><creatorcontrib>Lu, Ping</creatorcontrib><creatorcontrib>Wu, Qiuhong</creatorcontrib><creatorcontrib>Li, Miaomiao</creatorcontrib><creatorcontrib>Zhang, Deyun</creatorcontrib><creatorcontrib>Guo, Guanghao</creatorcontrib><creatorcontrib>Zhang, Yan</creatorcontrib><creatorcontrib>Liu, Dengcai</creatorcontrib><creatorcontrib>Zou, Shaokui</creatorcontrib><creatorcontrib>Tang, Jianwei</creatorcontrib><creatorcontrib>Zhao, Hong</creatorcontrib><creatorcontrib>Wang, Xicheng</creatorcontrib><creatorcontrib>Li, Jun</creatorcontrib><creatorcontrib>Yang, Wuyun</creatorcontrib><creatorcontrib>Cao, Tingjie</creatorcontrib><creatorcontrib>Yin, Guihong</creatorcontrib><creatorcontrib>Liu, Zhiyong</creatorcontrib><title>Mapping stripe rust resistance gene YrZH22 in Chinese wheat cultivar Zhoumai 22 by bulked segregant RNA-Seq (BSR-Seq) and comparative genomics analyses</title><title>Theoretical and applied genetics</title><addtitle>Theor Appl Genet</addtitle><addtitle>Theor Appl Genet</addtitle><description>Key message
A stripe rust resistance gene YrZH22 was mapped by combined BSR-Seq and comparative genomics analyses to a 5.92 centimorgan (cM) genetic interval spanning a 4 Mb physical genomic region on wheat chromosome 4BL1.
Stripe rust, caused by
Puccinia striiformis
f. sp.
tritici
(PST), is one of the most destructive diseases of wheat and severely threatens wheat production worldwide. The widely grown Chinese wheat cultivar Zhoumai 22 is highly resistant to the current prevailing PST race CYR34 (V26). Genetic analysis of F
5:6
and F
6:7
recombinant inbred line (RIL) populations indicated that adult-plant stripe rust resistance in Zhoumai 22 is controlled by a single gene, temporarily designated
YrZH22
. By applying bulked segregant RNA-Seq (BSR-Seq), 7 SNP markers were developed and SNP mapping showed that
YrZH22
is located between markers
WGGB105
and
WGGB112
on chromosome arm 4BL. The corresponding genomic regions of the Chinese Spring 4BL genome assembly and physical map of
Aegilops tauschii
4DL were selected for comparative genomics analyses to develop nine new polymorphic markers that were used to construct a high-resolution genetic linkage map of
YrZH22
.
YrZH22
was delimited in a 5.92 cM genetic interval between markers
WGGB133
and
WGGB146
, corresponding to 4.1 Mb genomic interval in Chinese Spring 4BL and a 2.2 Mb orthologous genomic region in
Ae. tauschii
4DL. The genetic linkage map of
YrZH22
will be valuable for fine mapping and positional cloning of
YrZH22
, and can be used for marker-assisted selection in wheat breeding.</description><subject>Agricultural production</subject><subject>Agriculture</subject><subject>Basidiomycota</subject><subject>Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Breeding</subject><subject>China</subject><subject>Chromosome Mapping</subject><subject>Cloning</subject><subject>Comparative Genomic Hybridization</subject><subject>Disease resistance (Plants)</subject><subject>Disease Resistance - genetics</subject><subject>Gene mapping</subject><subject>Genetic analysis</subject><subject>Genetic aspects</subject><subject>Genetic Linkage</subject><subject>Genomics</subject><subject>Genotype & phenotype</subject><subject>Inbreeding</subject><subject>Life Sciences</subject><subject>Marker-assisted selection</subject><subject>Methods</subject><subject>Original Article</subject><subject>Plant Biochemistry</subject><subject>Plant Breeding</subject><subject>Plant Breeding/Biotechnology</subject><subject>Plant Diseases - genetics</subject><subject>Plant Diseases - microbiology</subject><subject>Plant fungal diseases</subject><subject>Plant Genetics and Genomics</subject><subject>Polymorphism, Single Nucleotide</subject><subject>Prevention</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>RNA sequencing</subject><subject>Rusting</subject><subject>Single-nucleotide polymorphism</subject><subject>Stripe rust</subject><subject>Triticum - genetics</subject><subject>Triticum - microbiology</subject><subject>Wheat</subject><issn>0040-5752</issn><issn>1432-2242</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1ks9u1DAQxiMEokvhAbggS1zaQ8rYjp3kuF1RilRAauFAL5bXns26JE5qJ6B9El4Xhy1_BfLB1sxvPs_YX5Y9pXBCAcoXEYAylgMtc1YLyOFetqAFZzljBbufLQAKyEUp2EH2KMYbAGAC-MPsgFUlpbWQi-zrGz0MzjckjsENSMIURxIwujhqb5A06JF8DNfnjBHnyWrrPEYkX7aoR2KmdnSfdSDX237qtCMJWu_Iemo_oSURm4CN9iO5fLvMr_CWHJ1eXc6HY6K9JabvBh10Uvh-Td85E1NCt7uI8XH2YKPbiE_u9sPsw9nL96vz_OLdq9er5UVuCl6PudXCMrlmgst5otpoSat1XdWF1ViwyhYpIigvOVaSWa6lFULQutRoZCklP8yO9rpD6G8njKPqXDTYttpjP0VFawYMeFkVCX3-F3rTTyH1O1MFVLymVfmLanSLyvlNPwZtZlG1FCBkJWTJE3XyDyoti-kZeo8bl-J_FNB9gQl9jAE3agiu02GnKKjZDGpvBpXMoGYzKEg1z-4antYd2p8VP34_AWwPxJTyDYbfJvqv6jfjeLxJ</recordid><startdate>20171001</startdate><enddate>20171001</enddate><creator>Wang, Yong</creator><creator>Xie, Jingzhong</creator><creator>Zhang, Huaizhi</creator><creator>Guo, Bingmin</creator><creator>Ning, Shunzong</creator><creator>Chen, Yongxing</creator><creator>Lu, Ping</creator><creator>Wu, Qiuhong</creator><creator>Li, Miaomiao</creator><creator>Zhang, Deyun</creator><creator>Guo, Guanghao</creator><creator>Zhang, Yan</creator><creator>Liu, Dengcai</creator><creator>Zou, Shaokui</creator><creator>Tang, Jianwei</creator><creator>Zhao, Hong</creator><creator>Wang, Xicheng</creator><creator>Li, Jun</creator><creator>Yang, Wuyun</creator><creator>Cao, Tingjie</creator><creator>Yin, Guihong</creator><creator>Liu, Zhiyong</creator><general>Springer Berlin Heidelberg</general><general>Springer</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7SS</scope><scope>7TK</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20171001</creationdate><title>Mapping stripe rust resistance gene YrZH22 in Chinese wheat cultivar Zhoumai 22 by bulked segregant RNA-Seq (BSR-Seq) and comparative genomics analyses</title><author>Wang, Yong ; Xie, Jingzhong ; Zhang, Huaizhi ; Guo, Bingmin ; Ning, Shunzong ; Chen, Yongxing ; Lu, Ping ; Wu, Qiuhong ; Li, Miaomiao ; Zhang, Deyun ; Guo, Guanghao ; Zhang, Yan ; Liu, Dengcai ; Zou, Shaokui ; Tang, Jianwei ; Zhao, Hong ; Wang, Xicheng ; Li, Jun ; Yang, Wuyun ; Cao, Tingjie ; Yin, Guihong ; Liu, Zhiyong</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c439t-da5d26b253671199ca618b9894dae428d4ca651373e862d3a6d555197aec67663</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Agricultural production</topic><topic>Agriculture</topic><topic>Basidiomycota</topic><topic>Biochemistry</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>Breeding</topic><topic>China</topic><topic>Chromosome Mapping</topic><topic>Cloning</topic><topic>Comparative Genomic Hybridization</topic><topic>Disease resistance (Plants)</topic><topic>Disease Resistance - genetics</topic><topic>Gene mapping</topic><topic>Genetic analysis</topic><topic>Genetic aspects</topic><topic>Genetic Linkage</topic><topic>Genomics</topic><topic>Genotype & phenotype</topic><topic>Inbreeding</topic><topic>Life Sciences</topic><topic>Marker-assisted selection</topic><topic>Methods</topic><topic>Original Article</topic><topic>Plant Biochemistry</topic><topic>Plant Breeding</topic><topic>Plant Breeding/Biotechnology</topic><topic>Plant Diseases - genetics</topic><topic>Plant Diseases - microbiology</topic><topic>Plant fungal diseases</topic><topic>Plant Genetics and Genomics</topic><topic>Polymorphism, Single Nucleotide</topic><topic>Prevention</topic><topic>Ribonucleic acid</topic><topic>RNA</topic><topic>RNA sequencing</topic><topic>Rusting</topic><topic>Single-nucleotide polymorphism</topic><topic>Stripe rust</topic><topic>Triticum - genetics</topic><topic>Triticum - microbiology</topic><topic>Wheat</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wang, Yong</creatorcontrib><creatorcontrib>Xie, Jingzhong</creatorcontrib><creatorcontrib>Zhang, Huaizhi</creatorcontrib><creatorcontrib>Guo, Bingmin</creatorcontrib><creatorcontrib>Ning, Shunzong</creatorcontrib><creatorcontrib>Chen, Yongxing</creatorcontrib><creatorcontrib>Lu, Ping</creatorcontrib><creatorcontrib>Wu, Qiuhong</creatorcontrib><creatorcontrib>Li, Miaomiao</creatorcontrib><creatorcontrib>Zhang, Deyun</creatorcontrib><creatorcontrib>Guo, Guanghao</creatorcontrib><creatorcontrib>Zhang, Yan</creatorcontrib><creatorcontrib>Liu, Dengcai</creatorcontrib><creatorcontrib>Zou, Shaokui</creatorcontrib><creatorcontrib>Tang, Jianwei</creatorcontrib><creatorcontrib>Zhao, Hong</creatorcontrib><creatorcontrib>Wang, Xicheng</creatorcontrib><creatorcontrib>Li, Jun</creatorcontrib><creatorcontrib>Yang, Wuyun</creatorcontrib><creatorcontrib>Cao, Tingjie</creatorcontrib><creatorcontrib>Yin, Guihong</creatorcontrib><creatorcontrib>Liu, Zhiyong</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Neurosciences Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Theoretical and applied genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wang, Yong</au><au>Xie, Jingzhong</au><au>Zhang, Huaizhi</au><au>Guo, Bingmin</au><au>Ning, Shunzong</au><au>Chen, Yongxing</au><au>Lu, Ping</au><au>Wu, Qiuhong</au><au>Li, Miaomiao</au><au>Zhang, Deyun</au><au>Guo, Guanghao</au><au>Zhang, Yan</au><au>Liu, Dengcai</au><au>Zou, Shaokui</au><au>Tang, Jianwei</au><au>Zhao, Hong</au><au>Wang, Xicheng</au><au>Li, Jun</au><au>Yang, Wuyun</au><au>Cao, Tingjie</au><au>Yin, Guihong</au><au>Liu, Zhiyong</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Mapping stripe rust resistance gene YrZH22 in Chinese wheat cultivar Zhoumai 22 by bulked segregant RNA-Seq (BSR-Seq) and comparative genomics analyses</atitle><jtitle>Theoretical and applied genetics</jtitle><stitle>Theor Appl Genet</stitle><addtitle>Theor Appl Genet</addtitle><date>2017-10-01</date><risdate>2017</risdate><volume>130</volume><issue>10</issue><spage>2191</spage><epage>2201</epage><pages>2191-2201</pages><issn>0040-5752</issn><eissn>1432-2242</eissn><abstract>Key message
A stripe rust resistance gene YrZH22 was mapped by combined BSR-Seq and comparative genomics analyses to a 5.92 centimorgan (cM) genetic interval spanning a 4 Mb physical genomic region on wheat chromosome 4BL1.
Stripe rust, caused by
Puccinia striiformis
f. sp.
tritici
(PST), is one of the most destructive diseases of wheat and severely threatens wheat production worldwide. The widely grown Chinese wheat cultivar Zhoumai 22 is highly resistant to the current prevailing PST race CYR34 (V26). Genetic analysis of F
5:6
and F
6:7
recombinant inbred line (RIL) populations indicated that adult-plant stripe rust resistance in Zhoumai 22 is controlled by a single gene, temporarily designated
YrZH22
. By applying bulked segregant RNA-Seq (BSR-Seq), 7 SNP markers were developed and SNP mapping showed that
YrZH22
is located between markers
WGGB105
and
WGGB112
on chromosome arm 4BL. The corresponding genomic regions of the Chinese Spring 4BL genome assembly and physical map of
Aegilops tauschii
4DL were selected for comparative genomics analyses to develop nine new polymorphic markers that were used to construct a high-resolution genetic linkage map of
YrZH22
.
YrZH22
was delimited in a 5.92 cM genetic interval between markers
WGGB133
and
WGGB146
, corresponding to 4.1 Mb genomic interval in Chinese Spring 4BL and a 2.2 Mb orthologous genomic region in
Ae. tauschii
4DL. The genetic linkage map of
YrZH22
will be valuable for fine mapping and positional cloning of
YrZH22
, and can be used for marker-assisted selection in wheat breeding.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>28711956</pmid><doi>10.1007/s00122-017-2950-0</doi><tpages>11</tpages></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0040-5752 |
| ispartof | Theoretical and applied genetics, 2017-10, Vol.130 (10), p.2191-2201 |
| issn | 0040-5752 1432-2242 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_1920203784 |
| source | MEDLINE; SpringerLink Journals - AutoHoldings |
| subjects | Agricultural production Agriculture Basidiomycota Biochemistry Biomedical and Life Sciences Biotechnology Breeding China Chromosome Mapping Cloning Comparative Genomic Hybridization Disease resistance (Plants) Disease Resistance - genetics Gene mapping Genetic analysis Genetic aspects Genetic Linkage Genomics Genotype & phenotype Inbreeding Life Sciences Marker-assisted selection Methods Original Article Plant Biochemistry Plant Breeding Plant Breeding/Biotechnology Plant Diseases - genetics Plant Diseases - microbiology Plant fungal diseases Plant Genetics and Genomics Polymorphism, Single Nucleotide Prevention Ribonucleic acid RNA RNA sequencing Rusting Single-nucleotide polymorphism Stripe rust Triticum - genetics Triticum - microbiology Wheat |
| title | Mapping stripe rust resistance gene YrZH22 in Chinese wheat cultivar Zhoumai 22 by bulked segregant RNA-Seq (BSR-Seq) and comparative genomics analyses |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-21T16%3A07%3A08IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_proqu&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Mapping%20stripe%20rust%20resistance%20gene%20YrZH22%20in%20Chinese%20wheat%20cultivar%20Zhoumai%2022%20by%20bulked%20segregant%20RNA-Seq%20(BSR-Seq)%20and%20comparative%20genomics%20analyses&rft.jtitle=Theoretical%20and%20applied%20genetics&rft.au=Wang,%20Yong&rft.date=2017-10-01&rft.volume=130&rft.issue=10&rft.spage=2191&rft.epage=2201&rft.pages=2191-2201&rft.issn=0040-5752&rft.eissn=1432-2242&rft_id=info:doi/10.1007/s00122-017-2950-0&rft_dat=%3Cgale_proqu%3EA505685673%3C/gale_proqu%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1940839187&rft_id=info:pmid/28711956&rft_galeid=A505685673&rfr_iscdi=true |