Proteomic Analysis of Amyloid Corneal Aggregates from TGFBI-H626R Lattice Corneal Dystrophy Patient Implicates Serine-Protease HTRA1 in Mutation-Specific Pathogenesis of TGFBIp
TGFBI-associated corneal dystrophies are inherited disorders caused by TGFBI gene variants that promote deposition of mutant protein (TGFBIp) as insoluble aggregates in the cornea. Depending on the type and position of amino acid substitution, the aggregates may be amyloid fibrillar, amorphous globu...
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creator | Venkatraman, Anandalakshmi Dutta, Bamaprasad Murugan, Elavazhagan Piliang, Hao Lakshminaryanan, Rajamani Sook Yee, Anita Chan Pervushin, Konstantin V Sze, Siu Kwan Mehta, Jodhbir S |
description | TGFBI-associated corneal dystrophies are inherited disorders caused by TGFBI gene variants that promote deposition of mutant protein (TGFBIp) as insoluble aggregates in the cornea. Depending on the type and position of amino acid substitution, the aggregates may be amyloid fibrillar, amorphous globular or both, but the molecular mechanisms that drive these different patterns of aggregation are not fully understood. In the current study, we report the protein composition of amyloid corneal aggregates from lattice corneal dystrophy patients of Asian origin with H626R and R124C mutation and compared it with healthy corneal tissues via LC–MS/MS. We identified several amyloidogenic, nonfibrillar amyloid associated proteins and TGFBIp as the major components of the deposits. Our data indicates that apolipoprotein A-IV, apolipoprotein E, and serine protease HTRA1 were significantly enriched in patient deposits compared to healthy controls. HTRA1 was also found to be 7-fold enriched in the amyloid deposits of patients compared to the controls. Peptides sequences (G511DNRFSMLVAAIQSAGLTETLNR533 and Y571HIGDEILVSGGIGALVR588) derived from the fourth FAS-1 domain of TGFBIp were enriched in the corneal aggregates in a mutation-specific manner. Biophysical studies of these two enriched sequences revealed high propensity to form amyloid fibrils under physiological conditions. Our data suggests a possible proteolytic processing mechanism of mutant TGFBIp by HTRA1 and peptides generated by mutant protein may form the β-amyloid core of corneal aggregates in dystrophic patients. |
doi_str_mv | 10.1021/acs.jproteome.7b00188 |
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Depending on the type and position of amino acid substitution, the aggregates may be amyloid fibrillar, amorphous globular or both, but the molecular mechanisms that drive these different patterns of aggregation are not fully understood. In the current study, we report the protein composition of amyloid corneal aggregates from lattice corneal dystrophy patients of Asian origin with H626R and R124C mutation and compared it with healthy corneal tissues via LC–MS/MS. We identified several amyloidogenic, nonfibrillar amyloid associated proteins and TGFBIp as the major components of the deposits. Our data indicates that apolipoprotein A-IV, apolipoprotein E, and serine protease HTRA1 were significantly enriched in patient deposits compared to healthy controls. HTRA1 was also found to be 7-fold enriched in the amyloid deposits of patients compared to the controls. Peptides sequences (G511DNRFSMLVAAIQSAGLTETLNR533 and Y571HIGDEILVSGGIGALVR588) derived from the fourth FAS-1 domain of TGFBIp were enriched in the corneal aggregates in a mutation-specific manner. Biophysical studies of these two enriched sequences revealed high propensity to form amyloid fibrils under physiological conditions. Our data suggests a possible proteolytic processing mechanism of mutant TGFBIp by HTRA1 and peptides generated by mutant protein may form the β-amyloid core of corneal aggregates in dystrophic patients.</description><identifier>ISSN: 1535-3893</identifier><identifier>EISSN: 1535-3907</identifier><identifier>DOI: 10.1021/acs.jproteome.7b00188</identifier><identifier>PMID: 28689406</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Adult ; Amino Acid Sequence ; Amyloid - analysis ; Amyloid - chemistry ; Amyloid - metabolism ; Apolipoproteins A - analysis ; Apolipoproteins E - analysis ; Asian People ; Case-Control Studies ; Chromatography, Liquid ; Corneal Dystrophies, Hereditary - genetics ; Corneal Dystrophies, Hereditary - metabolism ; Corneal Dystrophies, Hereditary - pathology ; Female ; High-Temperature Requirement A Serine Peptidase 1 - analysis ; Humans ; Male ; Mutation ; Protein Aggregation, Pathological - genetics ; Proteomics - methods ; Tandem Mass Spectrometry ; Transforming Growth Factor beta1 - genetics</subject><ispartof>Journal of proteome research, 2017-08, Vol.16 (8), p.2899-2913</ispartof><rights>Copyright © 2017 American Chemical Society</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a351t-e153b4cf2abe16656d310a1d1ddc6b3fa582bcd98c30e8de1a5dce3ccafdadf33</citedby><cites>FETCH-LOGICAL-a351t-e153b4cf2abe16656d310a1d1ddc6b3fa582bcd98c30e8de1a5dce3ccafdadf33</cites><orcidid>0000-0001-6362-4898 ; 0000-0001-8214-5315 ; 0000-0002-5652-1687</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/acs.jproteome.7b00188$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/acs.jproteome.7b00188$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>314,776,780,2751,27055,27903,27904,56717,56767</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28689406$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Venkatraman, Anandalakshmi</creatorcontrib><creatorcontrib>Dutta, Bamaprasad</creatorcontrib><creatorcontrib>Murugan, Elavazhagan</creatorcontrib><creatorcontrib>Piliang, Hao</creatorcontrib><creatorcontrib>Lakshminaryanan, Rajamani</creatorcontrib><creatorcontrib>Sook Yee, Anita Chan</creatorcontrib><creatorcontrib>Pervushin, Konstantin V</creatorcontrib><creatorcontrib>Sze, Siu Kwan</creatorcontrib><creatorcontrib>Mehta, Jodhbir S</creatorcontrib><title>Proteomic Analysis of Amyloid Corneal Aggregates from TGFBI-H626R Lattice Corneal Dystrophy Patient Implicates Serine-Protease HTRA1 in Mutation-Specific Pathogenesis of TGFBIp</title><title>Journal of proteome research</title><addtitle>J. Proteome Res</addtitle><description>TGFBI-associated corneal dystrophies are inherited disorders caused by TGFBI gene variants that promote deposition of mutant protein (TGFBIp) as insoluble aggregates in the cornea. Depending on the type and position of amino acid substitution, the aggregates may be amyloid fibrillar, amorphous globular or both, but the molecular mechanisms that drive these different patterns of aggregation are not fully understood. In the current study, we report the protein composition of amyloid corneal aggregates from lattice corneal dystrophy patients of Asian origin with H626R and R124C mutation and compared it with healthy corneal tissues via LC–MS/MS. We identified several amyloidogenic, nonfibrillar amyloid associated proteins and TGFBIp as the major components of the deposits. Our data indicates that apolipoprotein A-IV, apolipoprotein E, and serine protease HTRA1 were significantly enriched in patient deposits compared to healthy controls. HTRA1 was also found to be 7-fold enriched in the amyloid deposits of patients compared to the controls. Peptides sequences (G511DNRFSMLVAAIQSAGLTETLNR533 and Y571HIGDEILVSGGIGALVR588) derived from the fourth FAS-1 domain of TGFBIp were enriched in the corneal aggregates in a mutation-specific manner. Biophysical studies of these two enriched sequences revealed high propensity to form amyloid fibrils under physiological conditions. Our data suggests a possible proteolytic processing mechanism of mutant TGFBIp by HTRA1 and peptides generated by mutant protein may form the β-amyloid core of corneal aggregates in dystrophic patients.</description><subject>Adult</subject><subject>Amino Acid Sequence</subject><subject>Amyloid - analysis</subject><subject>Amyloid - chemistry</subject><subject>Amyloid - metabolism</subject><subject>Apolipoproteins A - analysis</subject><subject>Apolipoproteins E - analysis</subject><subject>Asian People</subject><subject>Case-Control Studies</subject><subject>Chromatography, Liquid</subject><subject>Corneal Dystrophies, Hereditary - genetics</subject><subject>Corneal Dystrophies, Hereditary - metabolism</subject><subject>Corneal Dystrophies, Hereditary - pathology</subject><subject>Female</subject><subject>High-Temperature Requirement A Serine Peptidase 1 - analysis</subject><subject>Humans</subject><subject>Male</subject><subject>Mutation</subject><subject>Protein Aggregation, Pathological - genetics</subject><subject>Proteomics - methods</subject><subject>Tandem Mass Spectrometry</subject><subject>Transforming Growth Factor beta1 - genetics</subject><issn>1535-3893</issn><issn>1535-3907</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkctu4yAUhlHVUW_TR2jFshtnwNTYXrrpJZEymqpN1xaGQ0plGxfwwm81jzg0SbOdFSy-_z8HPoSuKJlRktJfQvrZx-BsANvBLG8IoUVxhM5oxrKElSQ__r4XJTtF595_RCTLCTtBp2nBi_KW8DP093lXYSSuetFO3nhsNa66qbVG4bl1PYgWV5uNg40I4LF2tsPrp8e7ZbLgKX_BKxGCkXBg7ycfnB3eJ_wsgoE-4GU3tEZu06_gTA_JdqrwgBfrl4pi0-PfY4i07ZPXAaTRcZ-Yfrcb6GG_03bm8BP90KL1cLk_L9Db48N6vkhWf56W82qVCJbRkEB8e3MrdSoaoJxnXDFKBFVUKckbpkVWpI1UZSEZgUIBFZmSwKQUWgmlGbtAN7ve-MefI_hQd8ZLaFvRgx19TUuac57meRrRbIdKZ713oOvBmU64qaak_pJVR1n1QVa9lxVz1_sRY9OBOqS-7USA7oBt3o4uGvL_Kf0HoMyovA</recordid><startdate>20170804</startdate><enddate>20170804</enddate><creator>Venkatraman, Anandalakshmi</creator><creator>Dutta, Bamaprasad</creator><creator>Murugan, Elavazhagan</creator><creator>Piliang, Hao</creator><creator>Lakshminaryanan, Rajamani</creator><creator>Sook Yee, Anita Chan</creator><creator>Pervushin, Konstantin V</creator><creator>Sze, Siu Kwan</creator><creator>Mehta, Jodhbir S</creator><general>American Chemical Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-6362-4898</orcidid><orcidid>https://orcid.org/0000-0001-8214-5315</orcidid><orcidid>https://orcid.org/0000-0002-5652-1687</orcidid></search><sort><creationdate>20170804</creationdate><title>Proteomic Analysis of Amyloid Corneal Aggregates from TGFBI-H626R Lattice Corneal Dystrophy Patient Implicates Serine-Protease HTRA1 in Mutation-Specific Pathogenesis of TGFBIp</title><author>Venkatraman, Anandalakshmi ; Dutta, Bamaprasad ; Murugan, Elavazhagan ; Piliang, Hao ; Lakshminaryanan, Rajamani ; Sook Yee, Anita Chan ; Pervushin, Konstantin V ; Sze, Siu Kwan ; Mehta, Jodhbir S</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a351t-e153b4cf2abe16656d310a1d1ddc6b3fa582bcd98c30e8de1a5dce3ccafdadf33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Adult</topic><topic>Amino Acid Sequence</topic><topic>Amyloid - analysis</topic><topic>Amyloid - chemistry</topic><topic>Amyloid - metabolism</topic><topic>Apolipoproteins A - analysis</topic><topic>Apolipoproteins E - analysis</topic><topic>Asian People</topic><topic>Case-Control Studies</topic><topic>Chromatography, Liquid</topic><topic>Corneal Dystrophies, Hereditary - genetics</topic><topic>Corneal Dystrophies, Hereditary - metabolism</topic><topic>Corneal Dystrophies, Hereditary - pathology</topic><topic>Female</topic><topic>High-Temperature Requirement A Serine Peptidase 1 - analysis</topic><topic>Humans</topic><topic>Male</topic><topic>Mutation</topic><topic>Protein Aggregation, Pathological - genetics</topic><topic>Proteomics - methods</topic><topic>Tandem Mass Spectrometry</topic><topic>Transforming Growth Factor beta1 - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Venkatraman, Anandalakshmi</creatorcontrib><creatorcontrib>Dutta, Bamaprasad</creatorcontrib><creatorcontrib>Murugan, Elavazhagan</creatorcontrib><creatorcontrib>Piliang, Hao</creatorcontrib><creatorcontrib>Lakshminaryanan, Rajamani</creatorcontrib><creatorcontrib>Sook Yee, Anita Chan</creatorcontrib><creatorcontrib>Pervushin, Konstantin V</creatorcontrib><creatorcontrib>Sze, Siu Kwan</creatorcontrib><creatorcontrib>Mehta, Jodhbir S</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of proteome research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Venkatraman, Anandalakshmi</au><au>Dutta, Bamaprasad</au><au>Murugan, Elavazhagan</au><au>Piliang, Hao</au><au>Lakshminaryanan, Rajamani</au><au>Sook Yee, Anita Chan</au><au>Pervushin, Konstantin V</au><au>Sze, Siu Kwan</au><au>Mehta, Jodhbir S</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Proteomic Analysis of Amyloid Corneal Aggregates from TGFBI-H626R Lattice Corneal Dystrophy Patient Implicates Serine-Protease HTRA1 in Mutation-Specific Pathogenesis of TGFBIp</atitle><jtitle>Journal of proteome research</jtitle><addtitle>J. Proteome Res</addtitle><date>2017-08-04</date><risdate>2017</risdate><volume>16</volume><issue>8</issue><spage>2899</spage><epage>2913</epage><pages>2899-2913</pages><issn>1535-3893</issn><eissn>1535-3907</eissn><abstract>TGFBI-associated corneal dystrophies are inherited disorders caused by TGFBI gene variants that promote deposition of mutant protein (TGFBIp) as insoluble aggregates in the cornea. Depending on the type and position of amino acid substitution, the aggregates may be amyloid fibrillar, amorphous globular or both, but the molecular mechanisms that drive these different patterns of aggregation are not fully understood. In the current study, we report the protein composition of amyloid corneal aggregates from lattice corneal dystrophy patients of Asian origin with H626R and R124C mutation and compared it with healthy corneal tissues via LC–MS/MS. We identified several amyloidogenic, nonfibrillar amyloid associated proteins and TGFBIp as the major components of the deposits. Our data indicates that apolipoprotein A-IV, apolipoprotein E, and serine protease HTRA1 were significantly enriched in patient deposits compared to healthy controls. HTRA1 was also found to be 7-fold enriched in the amyloid deposits of patients compared to the controls. Peptides sequences (G511DNRFSMLVAAIQSAGLTETLNR533 and Y571HIGDEILVSGGIGALVR588) derived from the fourth FAS-1 domain of TGFBIp were enriched in the corneal aggregates in a mutation-specific manner. Biophysical studies of these two enriched sequences revealed high propensity to form amyloid fibrils under physiological conditions. Our data suggests a possible proteolytic processing mechanism of mutant TGFBIp by HTRA1 and peptides generated by mutant protein may form the β-amyloid core of corneal aggregates in dystrophic patients.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>28689406</pmid><doi>10.1021/acs.jproteome.7b00188</doi><tpages>15</tpages><orcidid>https://orcid.org/0000-0001-6362-4898</orcidid><orcidid>https://orcid.org/0000-0001-8214-5315</orcidid><orcidid>https://orcid.org/0000-0002-5652-1687</orcidid></addata></record> |
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subjects | Adult Amino Acid Sequence Amyloid - analysis Amyloid - chemistry Amyloid - metabolism Apolipoproteins A - analysis Apolipoproteins E - analysis Asian People Case-Control Studies Chromatography, Liquid Corneal Dystrophies, Hereditary - genetics Corneal Dystrophies, Hereditary - metabolism Corneal Dystrophies, Hereditary - pathology Female High-Temperature Requirement A Serine Peptidase 1 - analysis Humans Male Mutation Protein Aggregation, Pathological - genetics Proteomics - methods Tandem Mass Spectrometry Transforming Growth Factor beta1 - genetics |
title | Proteomic Analysis of Amyloid Corneal Aggregates from TGFBI-H626R Lattice Corneal Dystrophy Patient Implicates Serine-Protease HTRA1 in Mutation-Specific Pathogenesis of TGFBIp |
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