Evaluation of genetic diversity among soybean (Glycine max) genotypes using univariate and multivariate analysis
The genetic diversity study has paramount importance in breeding programs; hence, it allows selection and choice of the parental genetic divergence, which have the agronomic traits desired by the breeder. This study aimed to characterize the genetic divergence between 24 soybean genotypes through th...
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description | The genetic diversity study has paramount importance in breeding programs; hence, it allows selection and choice of the parental genetic divergence, which have the agronomic traits desired by the breeder. This study aimed to characterize the genetic divergence between 24 soybean genotypes through their agronomic traits, using multivariate clustering methods to select the potential genitors for the promising hybrid combinations. Six agronomic traits evaluated were number of days to flowering and maturity, plant height at flowering and maturity, insertion height of the first pod, and yield. The genetic divergence evaluated by multivariate analysis that esteemed first the Mahalanobis' generalized distance (D
), then the clustering using Tocher's optimization methods, and then the unweighted pair group method with arithmetic average (UPGMA). Tocher's optimization method and the UPGMA agreed with the groups' constitution between each other, the formation of eight distinct groups according Tocher's method and seven distinct groups using UPGMA. The trait number of days for flowering (45.66%) was the most efficient to explain dissimilarity between genotypes, and must be one of the main traits considered by the breeder in the moment of genitors choice in soybean-breeding programs. The genetic variability allowed the identification of dissimilar genotypes and with superior performances. The hybridizations UFU 18 x UFUS CARAJÁS, UFU 15 x UFU 13, and UFU 13 x UFUS CARAJÁS are promising to obtain superior segregating populations, which enable the development of more productive genotypes. |
doi_str_mv | 10.4238/gmr16029661 |
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), then the clustering using Tocher's optimization methods, and then the unweighted pair group method with arithmetic average (UPGMA). Tocher's optimization method and the UPGMA agreed with the groups' constitution between each other, the formation of eight distinct groups according Tocher's method and seven distinct groups using UPGMA. The trait number of days for flowering (45.66%) was the most efficient to explain dissimilarity between genotypes, and must be one of the main traits considered by the breeder in the moment of genitors choice in soybean-breeding programs. The genetic variability allowed the identification of dissimilar genotypes and with superior performances. The hybridizations UFU 18 x UFUS CARAJÁS, UFU 15 x UFU 13, and UFU 13 x UFUS CARAJÁS are promising to obtain superior segregating populations, which enable the development of more productive genotypes.</description><identifier>ISSN: 1676-5680</identifier><identifier>EISSN: 1676-5680</identifier><identifier>DOI: 10.4238/gmr16029661</identifier><identifier>PMID: 28613377</identifier><language>eng</language><publisher>Brazil: Fundacao de Pesquisas Cientificas de Ribeirao Preto</publisher><subject>Breeding ; Flowering ; Genetic analysis ; Genetic diversity ; Genetic variability ; Genetic Variation ; Genotype ; Genotype & phenotype ; Genotypes ; Glycine max ; Glycine max - genetics ; Glycine max - growth & development ; Hybridization ; Insertion ; Models, Genetic ; Multivariate analysis ; Plant Breeding - methods ; Quantitative Trait, Heritable ; Soybeans</subject><ispartof>Genetics and molecular research, 2017-05, Vol.16 (2), p.1</ispartof><rights>Copyright Fundacao de Pesquisas Cientificas de Ribeirao Preto 2017</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c354t-2fc83dcd8c0425a0c1a5569e20770b0e8e4a1955caa74c4a72023d0293f3e5a73</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28613377$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Oliveira, M M</creatorcontrib><creatorcontrib>Sousa, L B</creatorcontrib><creatorcontrib>Reis, M C</creatorcontrib><creatorcontrib>Silva Junior, E G</creatorcontrib><creatorcontrib>Cardoso, D B O</creatorcontrib><creatorcontrib>Hamawaki, O T</creatorcontrib><creatorcontrib>Nogueira, A P O</creatorcontrib><title>Evaluation of genetic diversity among soybean (Glycine max) genotypes using univariate and multivariate analysis</title><title>Genetics and molecular research</title><addtitle>Genet Mol Res</addtitle><description>The genetic diversity study has paramount importance in breeding programs; hence, it allows selection and choice of the parental genetic divergence, which have the agronomic traits desired by the breeder. This study aimed to characterize the genetic divergence between 24 soybean genotypes through their agronomic traits, using multivariate clustering methods to select the potential genitors for the promising hybrid combinations. Six agronomic traits evaluated were number of days to flowering and maturity, plant height at flowering and maturity, insertion height of the first pod, and yield. The genetic divergence evaluated by multivariate analysis that esteemed first the Mahalanobis' generalized distance (D
), then the clustering using Tocher's optimization methods, and then the unweighted pair group method with arithmetic average (UPGMA). Tocher's optimization method and the UPGMA agreed with the groups' constitution between each other, the formation of eight distinct groups according Tocher's method and seven distinct groups using UPGMA. The trait number of days for flowering (45.66%) was the most efficient to explain dissimilarity between genotypes, and must be one of the main traits considered by the breeder in the moment of genitors choice in soybean-breeding programs. The genetic variability allowed the identification of dissimilar genotypes and with superior performances. The hybridizations UFU 18 x UFUS CARAJÁS, UFU 15 x UFU 13, and UFU 13 x UFUS CARAJÁS are promising to obtain superior segregating populations, which enable the development of more productive genotypes.</description><subject>Breeding</subject><subject>Flowering</subject><subject>Genetic analysis</subject><subject>Genetic diversity</subject><subject>Genetic variability</subject><subject>Genetic Variation</subject><subject>Genotype</subject><subject>Genotype & phenotype</subject><subject>Genotypes</subject><subject>Glycine max</subject><subject>Glycine max - genetics</subject><subject>Glycine max - growth & development</subject><subject>Hybridization</subject><subject>Insertion</subject><subject>Models, Genetic</subject><subject>Multivariate analysis</subject><subject>Plant Breeding - methods</subject><subject>Quantitative Trait, Heritable</subject><subject>Soybeans</subject><issn>1676-5680</issn><issn>1676-5680</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpdkc1Lw0AQxRdRbK2evMuCl4pE9yO7mxxF_IKCFz2H6WZSVpJs3U2K-e9NqUrxNMPwe4_hPULOObtJhcxuV03gmolca35AplwbnSidscO9fUJOYvxgTKg0Y8dkIjLNpTRmStYPG6h76Jxvqa_oClvsnKWl22CIrhsoNL5d0eiHJUJL50_1YF2LtIGvqy3tu2GNkfbRjVTfug0EBx1SaEva9HW3d4B6iC6ekqMK6ohnP3NG3h8f3u6fk8Xr08v93SKxUqVdIiqbydKWmWWpUMAsB6V0joIZw5YMM0yB50pZAJPaFIxgQpZjCrKSqMDIGZnvfNfBf_YYu6Jx0WJdQ4u-jwXPWW5SLUbFjFz-Qz98H8Z_YyEY0ybXUm8Nr3eUDT7GgFWxDq6BMBScFdsiir0iRvrix7NfNlj-sb_Jy28XbISL</recordid><startdate>20170531</startdate><enddate>20170531</enddate><creator>Oliveira, M M</creator><creator>Sousa, L B</creator><creator>Reis, M C</creator><creator>Silva Junior, E G</creator><creator>Cardoso, D B O</creator><creator>Hamawaki, O T</creator><creator>Nogueira, A P O</creator><general>Fundacao de Pesquisas Cientificas de Ribeirao Preto</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QP</scope><scope>7SS</scope><scope>7T5</scope><scope>7TK</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20170531</creationdate><title>Evaluation of genetic diversity among soybean (Glycine max) genotypes using univariate and multivariate analysis</title><author>Oliveira, M M ; Sousa, L B ; Reis, M C ; Silva Junior, E G ; Cardoso, D B O ; Hamawaki, O T ; Nogueira, A P O</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c354t-2fc83dcd8c0425a0c1a5569e20770b0e8e4a1955caa74c4a72023d0293f3e5a73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Breeding</topic><topic>Flowering</topic><topic>Genetic analysis</topic><topic>Genetic diversity</topic><topic>Genetic variability</topic><topic>Genetic Variation</topic><topic>Genotype</topic><topic>Genotype & phenotype</topic><topic>Genotypes</topic><topic>Glycine max</topic><topic>Glycine max - genetics</topic><topic>Glycine max - growth & development</topic><topic>Hybridization</topic><topic>Insertion</topic><topic>Models, Genetic</topic><topic>Multivariate analysis</topic><topic>Plant Breeding - methods</topic><topic>Quantitative Trait, Heritable</topic><topic>Soybeans</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Oliveira, M M</creatorcontrib><creatorcontrib>Sousa, L B</creatorcontrib><creatorcontrib>Reis, M C</creatorcontrib><creatorcontrib>Silva Junior, E G</creatorcontrib><creatorcontrib>Cardoso, D B O</creatorcontrib><creatorcontrib>Hamawaki, O T</creatorcontrib><creatorcontrib>Nogueira, A P O</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Immunology Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Genetics and molecular research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Oliveira, M M</au><au>Sousa, L B</au><au>Reis, M C</au><au>Silva Junior, E G</au><au>Cardoso, D B O</au><au>Hamawaki, O T</au><au>Nogueira, A P O</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Evaluation of genetic diversity among soybean (Glycine max) genotypes using univariate and multivariate analysis</atitle><jtitle>Genetics and molecular research</jtitle><addtitle>Genet Mol Res</addtitle><date>2017-05-31</date><risdate>2017</risdate><volume>16</volume><issue>2</issue><spage>1</spage><pages>1-</pages><issn>1676-5680</issn><eissn>1676-5680</eissn><abstract>The genetic diversity study has paramount importance in breeding programs; hence, it allows selection and choice of the parental genetic divergence, which have the agronomic traits desired by the breeder. 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), then the clustering using Tocher's optimization methods, and then the unweighted pair group method with arithmetic average (UPGMA). Tocher's optimization method and the UPGMA agreed with the groups' constitution between each other, the formation of eight distinct groups according Tocher's method and seven distinct groups using UPGMA. The trait number of days for flowering (45.66%) was the most efficient to explain dissimilarity between genotypes, and must be one of the main traits considered by the breeder in the moment of genitors choice in soybean-breeding programs. The genetic variability allowed the identification of dissimilar genotypes and with superior performances. The hybridizations UFU 18 x UFUS CARAJÁS, UFU 15 x UFU 13, and UFU 13 x UFUS CARAJÁS are promising to obtain superior segregating populations, which enable the development of more productive genotypes.</abstract><cop>Brazil</cop><pub>Fundacao de Pesquisas Cientificas de Ribeirao Preto</pub><pmid>28613377</pmid><doi>10.4238/gmr16029661</doi><oa>free_for_read</oa></addata></record> |
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subjects | Breeding Flowering Genetic analysis Genetic diversity Genetic variability Genetic Variation Genotype Genotype & phenotype Genotypes Glycine max Glycine max - genetics Glycine max - growth & development Hybridization Insertion Models, Genetic Multivariate analysis Plant Breeding - methods Quantitative Trait, Heritable Soybeans |
title | Evaluation of genetic diversity among soybean (Glycine max) genotypes using univariate and multivariate analysis |
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