STAG-CNS： An Order-Aware Conserved Noncoding Sequences Discovery Tool for Arbitrary Numbers of Species

One method for identifying noncoding regulatory regions of a genome is to quantify rates of divergence between related species, as functional sequence will generally diverge more slowly. Most approaches to identifying these conserved noncoding sequences （CNSs） based on alignment have had relatively...

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Veröffentlicht in:	Molecular plant 2017-07, Vol.10 (7), p.990-999
Hauptverfasser:	Lai, Xianjun, Behera, Sairam, Liang, Zhikai, Lu, Yanli, Deogun, Jitender S., Schnable, James C.
Format:	Artikel
Sprache:	eng
Schlagworte:	Algorithms comparative genomics conserved noncoding sequence Conserved Sequence - genetics DNA, Intergenic - genetics Genome, Plant - genetics Genomics - methods grain crops longest path algorithm suffix tree 基因 植物学 超敏反应 非编码序列
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