Multispecies diel transcriptional oscillations in open ocean heterotrophic bacterial assemblages
Oscillating diurnal rhythms of gene transcription, metabolic activity, and behavior are found in all three domains of life. However, diel cycles in naturally occurring heterotrophic bacteria and archaea have rarely been observed. Here, we report time-resolved whole-genome transcriptome profiles of m...
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Veröffentlicht in: | Science (American Association for the Advancement of Science) 2014-07, Vol.345 (6193), p.207-212 |
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creator | Ottesen, Elizabeth A. Young, Curtis R. Gifford, Scott M. Eppley, John M. Marin, Roman Schuster, Stephan C. Scholin, Christopher A. DeLong, Edward F. |
description | Oscillating diurnal rhythms of gene transcription, metabolic activity, and behavior are found in all three domains of life. However, diel cycles in naturally occurring heterotrophic bacteria and archaea have rarely been observed. Here, we report time-resolved whole-genome transcriptome profiles of multiple, naturally occurring oceanic bacterial populations sampled in situ over 3 days. As anticipated, the cyanobacterial transcriptome exhibited pronounced diel periodicity. Unexpectedly, several different heterotrophic bacterioplankton groups also displayed diel cycling in many of their gene transcripts. Furthermore, diel oscillations in different heterotrophic bacterial groups suggested population-specific timing of peak transcript expression in a variety of metabolic gene suites. These staggered multispecies waves of diel gene transcription may influence both the tempo and the mode of matter and energy transformation in the sea. |
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However, diel cycles in naturally occurring heterotrophic bacteria and archaea have rarely been observed. Here, we report time-resolved whole-genome transcriptome profiles of multiple, naturally occurring oceanic bacterial populations sampled in situ over 3 days. As anticipated, the cyanobacterial transcriptome exhibited pronounced diel periodicity. Unexpectedly, several different heterotrophic bacterioplankton groups also displayed diel cycling in many of their gene transcripts. Furthermore, diel oscillations in different heterotrophic bacterial groups suggested population-specific timing of peak transcript expression in a variety of metabolic gene suites. These staggered multispecies waves of diel gene transcription may influence both the tempo and the mode of matter and energy transformation in the sea.</description><identifier>ISSN: 0036-8075</identifier><identifier>EISSN: 1095-9203</identifier><identifier>DOI: 10.1126/science.1252476</identifier><identifier>CODEN: SCIEAS</identifier><language>eng</language><publisher>Washington: American Association for the Advancement of Science</publisher><subject>Amino acid metabolism ; Bacteria ; Carbon ; Consumer spending ; Gene expression ; Genes ; Nitrogen ; Oceans ; Organisms ; Oscillations ; Oscillators ; Photosynthesis ; Plankton ; Principal components analysis ; Roseobacter ; Salinity ; Surface chemistry ; Taxa ; Transcriptomes</subject><ispartof>Science (American Association for the Advancement of Science), 2014-07, Vol.345 (6193), p.207-212</ispartof><rights>Copyright © 2014 American Association for the Advancement of Science</rights><rights>Copyright © 2014, American Association for the Advancement of Science</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c464t-bde069ae7d30f752509d6bc95a98718c53ae7ceeb18af2f507cacfbb2b6fa4d53</citedby><cites>FETCH-LOGICAL-c464t-bde069ae7d30f752509d6bc95a98718c53ae7ceeb18af2f507cacfbb2b6fa4d53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/24744979$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/24744979$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,776,780,799,2871,2872,27903,27904,57995,58228</link.rule.ids></links><search><creatorcontrib>Ottesen, Elizabeth A.</creatorcontrib><creatorcontrib>Young, Curtis R.</creatorcontrib><creatorcontrib>Gifford, Scott M.</creatorcontrib><creatorcontrib>Eppley, John M.</creatorcontrib><creatorcontrib>Marin, Roman</creatorcontrib><creatorcontrib>Schuster, Stephan C.</creatorcontrib><creatorcontrib>Scholin, Christopher A.</creatorcontrib><creatorcontrib>DeLong, Edward F.</creatorcontrib><title>Multispecies diel transcriptional oscillations in open ocean heterotrophic bacterial assemblages</title><title>Science (American Association for the Advancement of Science)</title><description>Oscillating diurnal rhythms of gene transcription, metabolic activity, and behavior are found in all three domains of life. 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subjects | Amino acid metabolism Bacteria Carbon Consumer spending Gene expression Genes Nitrogen Oceans Organisms Oscillations Oscillators Photosynthesis Plankton Principal components analysis Roseobacter Salinity Surface chemistry Taxa Transcriptomes |
title | Multispecies diel transcriptional oscillations in open ocean heterotrophic bacterial assemblages |
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