Recognition of EGF-like domains by the Notch-modifying O-fucosyltransferase POFUT1
X-ray crystallographic analysis of the mouse protein- O -fucosyltransferase POFUT1 combined with average structural map analysis demonstrate that POFUT1 specifically recognizes only one of the four EGF-like domain types found in nature. Protein O -fucosyltransferase 1 (POFUT1) fucosylates the epider...
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Veröffentlicht in: | Nature chemical biology 2017-07, Vol.13 (7), p.757-763 |
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creator | Li, Zhijie Han, Kristina Pak, John E Satkunarajah, Malathy Zhou, Dongxia Rini, James M |
description | X-ray crystallographic analysis of the mouse protein-
O
-fucosyltransferase POFUT1 combined with average structural map analysis demonstrate that POFUT1 specifically recognizes only one of the four EGF-like domain types found in nature.
Protein
O
-fucosyltransferase 1 (POFUT1) fucosylates the epidermal growth factor (EGF)-like domains found in cell-surface and secreted glycoproteins including Notch and its ligands. Although Notch fucosylation is critical for development, and POFUT1 deficiency leads to human disease, how this enzyme binds and catalyzes the fucosylation of its diverse EGF-like domain substrates has not been determined. Reported here is the X-ray crystal structure of mouse POFUT1 in complex with several EGF-like domains, including EGF12 and EGF26 of Notch. Overall shape complementarity, interactions with invariant atoms of the fucosylation motif and flexible segments on POFUT1 all define its EGF-like-domain binding properties. Using large-scale structural and sequence analysis, we also show that POFUT1 binds EGF-like domains of the hEGF type and that the highly correlated presence of POFUT1 and fucosylatable hEGFs has accompanied animal evolution. |
doi_str_mv | 10.1038/nchembio.2381 |
format | Article |
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O
-fucosyltransferase POFUT1 combined with average structural map analysis demonstrate that POFUT1 specifically recognizes only one of the four EGF-like domain types found in nature.
Protein
O
-fucosyltransferase 1 (POFUT1) fucosylates the epidermal growth factor (EGF)-like domains found in cell-surface and secreted glycoproteins including Notch and its ligands. Although Notch fucosylation is critical for development, and POFUT1 deficiency leads to human disease, how this enzyme binds and catalyzes the fucosylation of its diverse EGF-like domain substrates has not been determined. Reported here is the X-ray crystal structure of mouse POFUT1 in complex with several EGF-like domains, including EGF12 and EGF26 of Notch. Overall shape complementarity, interactions with invariant atoms of the fucosylation motif and flexible segments on POFUT1 all define its EGF-like-domain binding properties. Using large-scale structural and sequence analysis, we also show that POFUT1 binds EGF-like domains of the hEGF type and that the highly correlated presence of POFUT1 and fucosylatable hEGFs has accompanied animal evolution.</description><identifier>ISSN: 1552-4450</identifier><identifier>EISSN: 1552-4469</identifier><identifier>DOI: 10.1038/nchembio.2381</identifier><identifier>PMID: 28530709</identifier><language>eng</language><publisher>New York: Nature Publishing Group US</publisher><subject>631/114/2164 ; 631/535/1266 ; 631/92/173 ; 631/92/221 ; Animals ; Biochemical Engineering ; Biochemistry ; Bioorganic Chemistry ; Cell Biology ; Cell surface ; Cells ; Chemistry ; Chemistry/Food Science ; Complementarity ; Crystal structure ; Crystallography, X-Ray ; Epidermal growth factor ; Epidermal Growth Factor - chemistry ; Fucosyltransferases - metabolism ; Galactoside 2-a-L-fucosyltransferase ; Glycoproteins ; Humans ; Ligands ; Mice ; Models, Molecular ; Protein Domains ; Receptors, Notch - metabolism ; Segments ; Substrates</subject><ispartof>Nature chemical biology, 2017-07, Vol.13 (7), p.757-763</ispartof><rights>Springer Nature America, Inc. 2017</rights><rights>Copyright Nature Publishing Group Jul 2017</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c426t-36d9d73d604d9f4651f55f4143c8cb2431c096d8d25021679d88c4024482e6a63</citedby><cites>FETCH-LOGICAL-c426t-36d9d73d604d9f4651f55f4143c8cb2431c096d8d25021679d88c4024482e6a63</cites><orcidid>0000-0001-9283-6072</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28530709$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Li, Zhijie</creatorcontrib><creatorcontrib>Han, Kristina</creatorcontrib><creatorcontrib>Pak, John E</creatorcontrib><creatorcontrib>Satkunarajah, Malathy</creatorcontrib><creatorcontrib>Zhou, Dongxia</creatorcontrib><creatorcontrib>Rini, James M</creatorcontrib><title>Recognition of EGF-like domains by the Notch-modifying O-fucosyltransferase POFUT1</title><title>Nature chemical biology</title><addtitle>Nat Chem Biol</addtitle><addtitle>Nat Chem Biol</addtitle><description>X-ray crystallographic analysis of the mouse protein-
O
-fucosyltransferase POFUT1 combined with average structural map analysis demonstrate that POFUT1 specifically recognizes only one of the four EGF-like domain types found in nature.
Protein
O
-fucosyltransferase 1 (POFUT1) fucosylates the epidermal growth factor (EGF)-like domains found in cell-surface and secreted glycoproteins including Notch and its ligands. Although Notch fucosylation is critical for development, and POFUT1 deficiency leads to human disease, how this enzyme binds and catalyzes the fucosylation of its diverse EGF-like domain substrates has not been determined. Reported here is the X-ray crystal structure of mouse POFUT1 in complex with several EGF-like domains, including EGF12 and EGF26 of Notch. Overall shape complementarity, interactions with invariant atoms of the fucosylation motif and flexible segments on POFUT1 all define its EGF-like-domain binding properties. Using large-scale structural and sequence analysis, we also show that POFUT1 binds EGF-like domains of the hEGF type and that the highly correlated presence of POFUT1 and fucosylatable hEGFs has accompanied animal evolution.</description><subject>631/114/2164</subject><subject>631/535/1266</subject><subject>631/92/173</subject><subject>631/92/221</subject><subject>Animals</subject><subject>Biochemical Engineering</subject><subject>Biochemistry</subject><subject>Bioorganic Chemistry</subject><subject>Cell Biology</subject><subject>Cell surface</subject><subject>Cells</subject><subject>Chemistry</subject><subject>Chemistry/Food Science</subject><subject>Complementarity</subject><subject>Crystal structure</subject><subject>Crystallography, X-Ray</subject><subject>Epidermal growth factor</subject><subject>Epidermal Growth Factor - chemistry</subject><subject>Fucosyltransferases - metabolism</subject><subject>Galactoside 2-a-L-fucosyltransferase</subject><subject>Glycoproteins</subject><subject>Humans</subject><subject>Ligands</subject><subject>Mice</subject><subject>Models, Molecular</subject><subject>Protein Domains</subject><subject>Receptors, Notch - metabolism</subject><subject>Segments</subject><subject>Substrates</subject><issn>1552-4450</issn><issn>1552-4469</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNpt0M1LwzAYBvAgipsfR69S8OKlM19Nk6OMbQrDiei5dPnYMttkJu2h_72VfSDiKS_kx_O-PADcIDhCkPAHJ9e6Xlo_woSjEzBEWYZTSpk4Pc4ZHICLGDcQEsYQPwcDzDMCcyiG4O1NS79ytrHeJd4kk9k0reynTpSvS-tisuySZq2TF9_IdVp7ZU1n3SpZpKaVPnZVE0oXjQ5l1MnrYvrxjq7AmSmrqK_37yX4mE7ex0_pfDF7Hj_OU0kxa1LClFA5UQxSJQxlGTJZZiiiRHK5xJQgCQVTXOEMYsRyoTiXFGJKOdasZOQS3O9yt8F_tTo2RW2j1FVVOu3bWCABEUGI56Knd3_oxrfB9df1CuWC9aGwV-lOyeBjDNoU22DrMnQFgsVP2cWh7OKn7N7f7lPbZa3VUR_a7cFoB2L_5VY6_Fr7b-I35ISJaA</recordid><startdate>20170701</startdate><enddate>20170701</enddate><creator>Li, Zhijie</creator><creator>Han, Kristina</creator><creator>Pak, John E</creator><creator>Satkunarajah, Malathy</creator><creator>Zhou, Dongxia</creator><creator>Rini, James M</creator><general>Nature Publishing Group US</general><general>Nature Publishing Group</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>BKSAR</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PCBAR</scope><scope>PDBOC</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-9283-6072</orcidid></search><sort><creationdate>20170701</creationdate><title>Recognition of EGF-like domains by the Notch-modifying O-fucosyltransferase POFUT1</title><author>Li, Zhijie ; Han, Kristina ; Pak, John E ; Satkunarajah, Malathy ; Zhou, Dongxia ; Rini, James M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c426t-36d9d73d604d9f4651f55f4143c8cb2431c096d8d25021679d88c4024482e6a63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>631/114/2164</topic><topic>631/535/1266</topic><topic>631/92/173</topic><topic>631/92/221</topic><topic>Animals</topic><topic>Biochemical Engineering</topic><topic>Biochemistry</topic><topic>Bioorganic Chemistry</topic><topic>Cell Biology</topic><topic>Cell surface</topic><topic>Cells</topic><topic>Chemistry</topic><topic>Chemistry/Food Science</topic><topic>Complementarity</topic><topic>Crystal structure</topic><topic>Crystallography, X-Ray</topic><topic>Epidermal growth factor</topic><topic>Epidermal Growth Factor - chemistry</topic><topic>Fucosyltransferases - metabolism</topic><topic>Galactoside 2-a-L-fucosyltransferase</topic><topic>Glycoproteins</topic><topic>Humans</topic><topic>Ligands</topic><topic>Mice</topic><topic>Models, Molecular</topic><topic>Protein Domains</topic><topic>Receptors, Notch - metabolism</topic><topic>Segments</topic><topic>Substrates</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Li, Zhijie</creatorcontrib><creatorcontrib>Han, Kristina</creatorcontrib><creatorcontrib>Pak, John E</creatorcontrib><creatorcontrib>Satkunarajah, Malathy</creatorcontrib><creatorcontrib>Zhou, Dongxia</creatorcontrib><creatorcontrib>Rini, James M</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Materials Science & Engineering Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>Natural Science Collection</collection><collection>Earth, Atmospheric & Aquatic Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Materials Science Collection</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Materials Science Database</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Science Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Earth, Atmospheric & Aquatic Science Database</collection><collection>Materials Science Collection</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Nature chemical biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Li, Zhijie</au><au>Han, Kristina</au><au>Pak, John E</au><au>Satkunarajah, Malathy</au><au>Zhou, Dongxia</au><au>Rini, James M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Recognition of EGF-like domains by the Notch-modifying O-fucosyltransferase POFUT1</atitle><jtitle>Nature chemical biology</jtitle><stitle>Nat Chem Biol</stitle><addtitle>Nat Chem Biol</addtitle><date>2017-07-01</date><risdate>2017</risdate><volume>13</volume><issue>7</issue><spage>757</spage><epage>763</epage><pages>757-763</pages><issn>1552-4450</issn><eissn>1552-4469</eissn><abstract>X-ray crystallographic analysis of the mouse protein-
O
-fucosyltransferase POFUT1 combined with average structural map analysis demonstrate that POFUT1 specifically recognizes only one of the four EGF-like domain types found in nature.
Protein
O
-fucosyltransferase 1 (POFUT1) fucosylates the epidermal growth factor (EGF)-like domains found in cell-surface and secreted glycoproteins including Notch and its ligands. Although Notch fucosylation is critical for development, and POFUT1 deficiency leads to human disease, how this enzyme binds and catalyzes the fucosylation of its diverse EGF-like domain substrates has not been determined. Reported here is the X-ray crystal structure of mouse POFUT1 in complex with several EGF-like domains, including EGF12 and EGF26 of Notch. Overall shape complementarity, interactions with invariant atoms of the fucosylation motif and flexible segments on POFUT1 all define its EGF-like-domain binding properties. Using large-scale structural and sequence analysis, we also show that POFUT1 binds EGF-like domains of the hEGF type and that the highly correlated presence of POFUT1 and fucosylatable hEGFs has accompanied animal evolution.</abstract><cop>New York</cop><pub>Nature Publishing Group US</pub><pmid>28530709</pmid><doi>10.1038/nchembio.2381</doi><tpages>7</tpages><orcidid>https://orcid.org/0000-0001-9283-6072</orcidid></addata></record> |
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subjects | 631/114/2164 631/535/1266 631/92/173 631/92/221 Animals Biochemical Engineering Biochemistry Bioorganic Chemistry Cell Biology Cell surface Cells Chemistry Chemistry/Food Science Complementarity Crystal structure Crystallography, X-Ray Epidermal growth factor Epidermal Growth Factor - chemistry Fucosyltransferases - metabolism Galactoside 2-a-L-fucosyltransferase Glycoproteins Humans Ligands Mice Models, Molecular Protein Domains Receptors, Notch - metabolism Segments Substrates |
title | Recognition of EGF-like domains by the Notch-modifying O-fucosyltransferase POFUT1 |
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