Mycobacteria Encode Active and Inactive Classes of TesB Fatty-Acyl CoA Thioesterases Revealed through Structural and Functional Analysis

Mycobacteria contain a large number of highly divergent species and exhibit unusual lipid metabolism profiles, believed to play important roles in immune invasion. Thioesterases modulate lipid metabolism through the hydrolysis of activated fatty-acyl CoAs; multiple copies are present in mycobacteria...

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Veröffentlicht in:Biochemistry (Easton) 2017-03, Vol.56 (10), p.1460-1472
Hauptverfasser: Swarbrick, Crystall M. D, Bythrow, Glennon V, Aragao, David, Germain, Gabrielle A, Quadri, Luis E. N, Forwood, Jade K
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container_end_page 1472
container_issue 10
container_start_page 1460
container_title Biochemistry (Easton)
container_volume 56
creator Swarbrick, Crystall M. D
Bythrow, Glennon V
Aragao, David
Germain, Gabrielle A
Quadri, Luis E. N
Forwood, Jade K
description Mycobacteria contain a large number of highly divergent species and exhibit unusual lipid metabolism profiles, believed to play important roles in immune invasion. Thioesterases modulate lipid metabolism through the hydrolysis of activated fatty-acyl CoAs; multiple copies are present in mycobacteria, yet many remain uncharacterized. Here, we undertake a comprehensive structural and functional analysis of a TesB thioesterase from Mycobacterium avium (MaTesB). Structural superposition with other TesB thioesterases reveals that the Asp active site residue, highly conserved across a wide range of TesB thioesterases, is mutated to Ala. Consistent with these structural data, the wild-type enzyme failed to hydrolyze an extensive range of acyl-CoA substrates. Mutation of this residue to an active Asp residue restored activity against a range of medium-chain length fatty-acyl CoA substrates. Interestingly, this Ala mutation is highly conserved across a wide range of Mycobacterium species but not found in any other bacteria or organism. Our structural homology analysis revealed that at least one other TesB acyl-CoA thioesterase also contains an Ala residue at the active site, while two other Mycobacterium TesB thioesterases harbor an Asp residue at the active site. The inactive TesBs display a common quaternary structure that is distinct from that of the active TesB thioesterases. Investigation of the effect of expression of either the catalytically active or inactive MaTesB in Mycobacterium smegmatis exposed, to the best of our knowledge, the first genotype–phenotype association implicating a mycobacterial tesB gene. This is the first report that mycobacteria encode active and inactive forms of thioesterases, the latter of which appear to be unique to mycobacteria.
doi_str_mv 10.1021/acs.biochem.6b01049
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Structural superposition with other TesB thioesterases reveals that the Asp active site residue, highly conserved across a wide range of TesB thioesterases, is mutated to Ala. Consistent with these structural data, the wild-type enzyme failed to hydrolyze an extensive range of acyl-CoA substrates. Mutation of this residue to an active Asp residue restored activity against a range of medium-chain length fatty-acyl CoA substrates. Interestingly, this Ala mutation is highly conserved across a wide range of Mycobacterium species but not found in any other bacteria or organism. Our structural homology analysis revealed that at least one other TesB acyl-CoA thioesterase also contains an Ala residue at the active site, while two other Mycobacterium TesB thioesterases harbor an Asp residue at the active site. The inactive TesBs display a common quaternary structure that is distinct from that of the active TesB thioesterases. 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D</creatorcontrib><creatorcontrib>Bythrow, Glennon V</creatorcontrib><creatorcontrib>Aragao, David</creatorcontrib><creatorcontrib>Germain, Gabrielle A</creatorcontrib><creatorcontrib>Quadri, Luis E. N</creatorcontrib><creatorcontrib>Forwood, Jade K</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><jtitle>Biochemistry (Easton)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Swarbrick, Crystall M. D</au><au>Bythrow, Glennon V</au><au>Aragao, David</au><au>Germain, Gabrielle A</au><au>Quadri, Luis E. N</au><au>Forwood, Jade K</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Mycobacteria Encode Active and Inactive Classes of TesB Fatty-Acyl CoA Thioesterases Revealed through Structural and Functional Analysis</atitle><jtitle>Biochemistry (Easton)</jtitle><addtitle>Biochemistry</addtitle><date>2017-03-14</date><risdate>2017</risdate><volume>56</volume><issue>10</issue><spage>1460</spage><epage>1472</epage><pages>1460-1472</pages><issn>0006-2960</issn><eissn>1520-4995</eissn><abstract>Mycobacteria contain a large number of highly divergent species and exhibit unusual lipid metabolism profiles, believed to play important roles in immune invasion. Thioesterases modulate lipid metabolism through the hydrolysis of activated fatty-acyl CoAs; multiple copies are present in mycobacteria, yet many remain uncharacterized. Here, we undertake a comprehensive structural and functional analysis of a TesB thioesterase from Mycobacterium avium (MaTesB). Structural superposition with other TesB thioesterases reveals that the Asp active site residue, highly conserved across a wide range of TesB thioesterases, is mutated to Ala. Consistent with these structural data, the wild-type enzyme failed to hydrolyze an extensive range of acyl-CoA substrates. Mutation of this residue to an active Asp residue restored activity against a range of medium-chain length fatty-acyl CoA substrates. Interestingly, this Ala mutation is highly conserved across a wide range of Mycobacterium species but not found in any other bacteria or organism. Our structural homology analysis revealed that at least one other TesB acyl-CoA thioesterase also contains an Ala residue at the active site, while two other Mycobacterium TesB thioesterases harbor an Asp residue at the active site. The inactive TesBs display a common quaternary structure that is distinct from that of the active TesB thioesterases. Investigation of the effect of expression of either the catalytically active or inactive MaTesB in Mycobacterium smegmatis exposed, to the best of our knowledge, the first genotype–phenotype association implicating a mycobacterial tesB gene. This is the first report that mycobacteria encode active and inactive forms of thioesterases, the latter of which appear to be unique to mycobacteria.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>28156101</pmid><doi>10.1021/acs.biochem.6b01049</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0003-3267-9997</orcidid></addata></record>
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subjects Acyl Coenzyme A - chemistry
Acyl Coenzyme A - metabolism
Alanine - chemistry
Alanine - metabolism
Amino Acid Sequence
Amino Acid Substitution
Aspartic Acid - chemistry
Aspartic Acid - metabolism
Bacterial Proteins - chemistry
Bacterial Proteins - classification
Bacterial Proteins - genetics
Bacterial Proteins - metabolism
Catalytic Domain
Escherichia coli - enzymology
Escherichia coli - genetics
Gene Expression
Genetic Association Studies
Hydrolysis
Isoenzymes - chemistry
Isoenzymes - classification
Isoenzymes - genetics
Isoenzymes - metabolism
Kinetics
Mutation
Mycobacterium avium
Mycobacterium avium - enzymology
Mycobacterium avium - genetics
Mycobacterium smegmatis
Mycobacterium smegmatis - enzymology
Mycobacterium smegmatis - genetics
Palmitoyl-CoA Hydrolase - chemistry
Palmitoyl-CoA Hydrolase - classification
Palmitoyl-CoA Hydrolase - genetics
Palmitoyl-CoA Hydrolase - metabolism
Protein Domains
Protein Structure, Quaternary
Protein Structure, Secondary
Recombinant Proteins - chemistry
Recombinant Proteins - classification
Recombinant Proteins - genetics
Recombinant Proteins - metabolism
Sequence Alignment
Sequence Homology, Amino Acid
Structure-Activity Relationship
title Mycobacteria Encode Active and Inactive Classes of TesB Fatty-Acyl CoA Thioesterases Revealed through Structural and Functional Analysis
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