Identification of a novel missence mutation in FGFR3 gene in an Iranian family with LADD syndrome by Next-Generation Sequencing
Abstract Lacrimo-auriculo-dento-digital syndrome (LADD) is a multiple congenital anomaly and a genetically heterogeneous disorder. The aim of this study was to identify the pathogenic gene in an Iranian family with LADD syndrome and review the literature on reported mutations that involved in pathog...
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Veröffentlicht in: | International journal of pediatric otorhinolaryngology 2017-06, Vol.97, p.192-196 |
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creator | Talebi, Farah Ghanbari Mardasi, Farideh Mohammadi Asl, Javad Bavarsad, Amir Hooshang Tizno, Saeed |
description | Abstract Lacrimo-auriculo-dento-digital syndrome (LADD) is a multiple congenital anomaly and a genetically heterogeneous disorder. The aim of this study was to identify the pathogenic gene in an Iranian family with LADD syndrome and review the literature on reported mutations that involved in pathogenesis of LADD syndrome. One novel variant, c.1882 G>A, in fibroblast growth factor receptor 3 (FGFR3) was identified by next generation sequencing and Sanger sequencing. The heterozygous FGFR3 c.1882 G>A variant results in substitution of aspartic acid with asparagine at amino acid 628 (p.D628N) and co-segregated with the phenotype in the LADD family. Our findings suggest that the heterozygous FGFR3 c.1882 G>A variant might be the pathogenic mutation, because this amino acid is conserved in several species. Our data extend the mutation spectrum of the FGFR3 gene and have important implications for genetic counseling for the families. This is the second report of FGFR3 involvement in syndromic deafness in humans, and confirms the gene’s positive role in inner ear development. In addition, this is the first FGFR3 mutation recognized in the Iranian LADD family. |
doi_str_mv | 10.1016/j.ijporl.2017.04.016 |
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The aim of this study was to identify the pathogenic gene in an Iranian family with LADD syndrome and review the literature on reported mutations that involved in pathogenesis of LADD syndrome. One novel variant, c.1882 G>A, in fibroblast growth factor receptor 3 (FGFR3) was identified by next generation sequencing and Sanger sequencing. The heterozygous FGFR3 c.1882 G>A variant results in substitution of aspartic acid with asparagine at amino acid 628 (p.D628N) and co-segregated with the phenotype in the LADD family. Our findings suggest that the heterozygous FGFR3 c.1882 G>A variant might be the pathogenic mutation, because this amino acid is conserved in several species. Our data extend the mutation spectrum of the FGFR3 gene and have important implications for genetic counseling for the families. This is the second report of FGFR3 involvement in syndromic deafness in humans, and confirms the gene’s positive role in inner ear development. In addition, this is the first FGFR3 mutation recognized in the Iranian LADD family.</description><identifier>ISSN: 0165-5876</identifier><identifier>EISSN: 1872-8464</identifier><identifier>DOI: 10.1016/j.ijporl.2017.04.016</identifier><identifier>PMID: 28483234</identifier><language>eng</language><publisher>Ireland: Elsevier B.V</publisher><subject>Abnormalities, Multiple - genetics ; Adult ; Autosomal dominant ; Female ; FGFR3 ; Hearing Loss - genetics ; High-Throughput Nucleotide Sequencing - methods ; Humans ; Iran ; Lacrimal Apparatus - abnormalities ; Lacrimal Apparatus Diseases - genetics ; Lacrimo-auriculo-dento-digital (LADD) ; Male ; Mutation ; Next-generation sequencing ; Novel mutation ; Otolaryngology ; Pediatrics ; Pedigree ; Receptor, Fibroblast Growth Factor, Type 3 - genetics ; Syndactyly - genetics ; Tooth Abnormalities - genetics</subject><ispartof>International journal of pediatric otorhinolaryngology, 2017-06, Vol.97, p.192-196</ispartof><rights>2017 Elsevier B.V.</rights><rights>Copyright © 2017 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c417t-d9f286ce3819ca90c8debdb04d4f02982167bbfc83df870672e0e77e69e62d2e3</citedby><cites>FETCH-LOGICAL-c417t-d9f286ce3819ca90c8debdb04d4f02982167bbfc83df870672e0e77e69e62d2e3</cites><orcidid>0000-0002-9274-6592</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.ijporl.2017.04.016$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3548,27922,27923,45993</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28483234$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Talebi, Farah</creatorcontrib><creatorcontrib>Ghanbari Mardasi, Farideh</creatorcontrib><creatorcontrib>Mohammadi Asl, Javad</creatorcontrib><creatorcontrib>Bavarsad, Amir Hooshang</creatorcontrib><creatorcontrib>Tizno, Saeed</creatorcontrib><title>Identification of a novel missence mutation in FGFR3 gene in an Iranian family with LADD syndrome by Next-Generation Sequencing</title><title>International journal of pediatric otorhinolaryngology</title><addtitle>Int J Pediatr Otorhinolaryngol</addtitle><description>Abstract Lacrimo-auriculo-dento-digital syndrome (LADD) is a multiple congenital anomaly and a genetically heterogeneous disorder. The aim of this study was to identify the pathogenic gene in an Iranian family with LADD syndrome and review the literature on reported mutations that involved in pathogenesis of LADD syndrome. One novel variant, c.1882 G>A, in fibroblast growth factor receptor 3 (FGFR3) was identified by next generation sequencing and Sanger sequencing. The heterozygous FGFR3 c.1882 G>A variant results in substitution of aspartic acid with asparagine at amino acid 628 (p.D628N) and co-segregated with the phenotype in the LADD family. Our findings suggest that the heterozygous FGFR3 c.1882 G>A variant might be the pathogenic mutation, because this amino acid is conserved in several species. Our data extend the mutation spectrum of the FGFR3 gene and have important implications for genetic counseling for the families. This is the second report of FGFR3 involvement in syndromic deafness in humans, and confirms the gene’s positive role in inner ear development. In addition, this is the first FGFR3 mutation recognized in the Iranian LADD family.</description><subject>Abnormalities, Multiple - genetics</subject><subject>Adult</subject><subject>Autosomal dominant</subject><subject>Female</subject><subject>FGFR3</subject><subject>Hearing Loss - genetics</subject><subject>High-Throughput Nucleotide Sequencing - methods</subject><subject>Humans</subject><subject>Iran</subject><subject>Lacrimal Apparatus - abnormalities</subject><subject>Lacrimal Apparatus Diseases - genetics</subject><subject>Lacrimo-auriculo-dento-digital (LADD)</subject><subject>Male</subject><subject>Mutation</subject><subject>Next-generation sequencing</subject><subject>Novel mutation</subject><subject>Otolaryngology</subject><subject>Pediatrics</subject><subject>Pedigree</subject><subject>Receptor, Fibroblast Growth Factor, Type 3 - genetics</subject><subject>Syndactyly - genetics</subject><subject>Tooth Abnormalities - genetics</subject><issn>0165-5876</issn><issn>1872-8464</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFUU1v1DAQtRCILoV_gJCPXJLajmM7F6Sq7S4rrUCiIHGzEntSvCTOYieFnPjrOErLgQunkcfvQ_MeQq8pySmh4uKYu-NpCF3OCJU54XlaPkEbqiTLFBf8KdqkTZmVSooz9CLGI0lAUpbP0RlTXBWs4Bv0e2_Bj651ph7d4PHQ4hr74R463LsYwRvA_TSun87j7W77qcB34GF51R7vQ-1dmm3du27GP934DR8ur69xnL0NQw-4mfEH-DVmu0QKq9At_JiStPN3L9Gztu4ivHqY5-jL9ubz1fvs8HG3v7o8ZIZTOWa2apkSBgpFK1NXxCgLjW0It7wlrFKMCtk0rVGFbZUkQjIgICWICgSzDIpz9HbVPYUhecdRp_MMdF3tYZiipqoSqioqUSUoX6EmDDEGaPUpuL4Os6ZEL9Hro16j10v0mnCdlon25sFhanqwf0mPWSfAuxUA6c57B0FH45aArQtgRm0H9z-HfwVM53xqrvsOM8TjMAWfMtRUR6aJvl3qX9qnsiC0lF-LP9xWrOk</recordid><startdate>20170601</startdate><enddate>20170601</enddate><creator>Talebi, Farah</creator><creator>Ghanbari Mardasi, Farideh</creator><creator>Mohammadi Asl, Javad</creator><creator>Bavarsad, Amir Hooshang</creator><creator>Tizno, Saeed</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-9274-6592</orcidid></search><sort><creationdate>20170601</creationdate><title>Identification of a novel missence mutation in FGFR3 gene in an Iranian family with LADD syndrome by Next-Generation Sequencing</title><author>Talebi, Farah ; Ghanbari Mardasi, Farideh ; Mohammadi Asl, Javad ; Bavarsad, Amir Hooshang ; Tizno, Saeed</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c417t-d9f286ce3819ca90c8debdb04d4f02982167bbfc83df870672e0e77e69e62d2e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Abnormalities, Multiple - genetics</topic><topic>Adult</topic><topic>Autosomal dominant</topic><topic>Female</topic><topic>FGFR3</topic><topic>Hearing Loss - genetics</topic><topic>High-Throughput Nucleotide Sequencing - methods</topic><topic>Humans</topic><topic>Iran</topic><topic>Lacrimal Apparatus - abnormalities</topic><topic>Lacrimal Apparatus Diseases - genetics</topic><topic>Lacrimo-auriculo-dento-digital (LADD)</topic><topic>Male</topic><topic>Mutation</topic><topic>Next-generation sequencing</topic><topic>Novel mutation</topic><topic>Otolaryngology</topic><topic>Pediatrics</topic><topic>Pedigree</topic><topic>Receptor, Fibroblast Growth Factor, Type 3 - genetics</topic><topic>Syndactyly - genetics</topic><topic>Tooth Abnormalities - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Talebi, Farah</creatorcontrib><creatorcontrib>Ghanbari Mardasi, Farideh</creatorcontrib><creatorcontrib>Mohammadi Asl, Javad</creatorcontrib><creatorcontrib>Bavarsad, Amir Hooshang</creatorcontrib><creatorcontrib>Tizno, Saeed</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of pediatric otorhinolaryngology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Talebi, Farah</au><au>Ghanbari Mardasi, Farideh</au><au>Mohammadi Asl, Javad</au><au>Bavarsad, Amir Hooshang</au><au>Tizno, Saeed</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification of a novel missence mutation in FGFR3 gene in an Iranian family with LADD syndrome by Next-Generation Sequencing</atitle><jtitle>International journal of pediatric otorhinolaryngology</jtitle><addtitle>Int J Pediatr Otorhinolaryngol</addtitle><date>2017-06-01</date><risdate>2017</risdate><volume>97</volume><spage>192</spage><epage>196</epage><pages>192-196</pages><issn>0165-5876</issn><eissn>1872-8464</eissn><abstract>Abstract Lacrimo-auriculo-dento-digital syndrome (LADD) is a multiple congenital anomaly and a genetically heterogeneous disorder. The aim of this study was to identify the pathogenic gene in an Iranian family with LADD syndrome and review the literature on reported mutations that involved in pathogenesis of LADD syndrome. One novel variant, c.1882 G>A, in fibroblast growth factor receptor 3 (FGFR3) was identified by next generation sequencing and Sanger sequencing. The heterozygous FGFR3 c.1882 G>A variant results in substitution of aspartic acid with asparagine at amino acid 628 (p.D628N) and co-segregated with the phenotype in the LADD family. Our findings suggest that the heterozygous FGFR3 c.1882 G>A variant might be the pathogenic mutation, because this amino acid is conserved in several species. Our data extend the mutation spectrum of the FGFR3 gene and have important implications for genetic counseling for the families. This is the second report of FGFR3 involvement in syndromic deafness in humans, and confirms the gene’s positive role in inner ear development. In addition, this is the first FGFR3 mutation recognized in the Iranian LADD family.</abstract><cop>Ireland</cop><pub>Elsevier B.V</pub><pmid>28483234</pmid><doi>10.1016/j.ijporl.2017.04.016</doi><tpages>5</tpages><orcidid>https://orcid.org/0000-0002-9274-6592</orcidid></addata></record> |
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subjects | Abnormalities, Multiple - genetics Adult Autosomal dominant Female FGFR3 Hearing Loss - genetics High-Throughput Nucleotide Sequencing - methods Humans Iran Lacrimal Apparatus - abnormalities Lacrimal Apparatus Diseases - genetics Lacrimo-auriculo-dento-digital (LADD) Male Mutation Next-generation sequencing Novel mutation Otolaryngology Pediatrics Pedigree Receptor, Fibroblast Growth Factor, Type 3 - genetics Syndactyly - genetics Tooth Abnormalities - genetics |
title | Identification of a novel missence mutation in FGFR3 gene in an Iranian family with LADD syndrome by Next-Generation Sequencing |
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