miRNA regulation is important for DNA damage repair and recognition in malignant pleural mesothelioma
Platin-containing regimes are currently considered as state-of-the-art therapies in malignant pleural mesotheliomas (MPM) but show dissatisfying response rates ranging from 6 to 16% only. Still, the reasons for the rather poor efficacy remain largely unknown. A clear stratification of patients based...
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Veröffentlicht in: | Virchows Archiv : an international journal of pathology 2017-06, Vol.470 (6), p.627-637 |
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creator | Mairinger, Fabian Dominik Werner, Robert Flom, Elena Schmeller, Jan Borchert, Sabrina Wessolly, Michael Wohlschlaeger, Jeremias Hager, Thomas Mairinger, Thomas Kollmeier, Jens Christoph, Daniel Christian Schmid, Kurt Werner Walter, Robert Fred Henry |
description | Platin-containing regimes are currently considered as state-of-the-art therapies in malignant pleural mesotheliomas (MPM) but show dissatisfying response rates ranging from 6 to 16% only. Still, the reasons for the rather poor efficacy remain largely unknown. A clear stratification of patients based on new biomarkers seems to be a promising approach to enhance clinical management, which would be a long-needed improvement for MPM patients but does not seem likely soon unless new biomarkers can be validated. Twenty-four formalin-fixed, paraffin-embedded (FFPE) tumour specimens were subjected to a miRNA expression screening of 800 important miRNAs using digital quantification via the nCounter technique (NanoString). We defined a small subset of miRNAs regulating the key enzymes involved in the repair of platin-associated DNA damage. Particularly, the TP53 pathway network for DNA damage recognition as well as genes related to the term “BRCAness” are the main miRNA targets within this context. The TP53 pathway network for DNA damage recognition as well as genes related to the term “BRCAness” are the main players for risk stratification in patients suffering from this severe disease. Taking the specific molecular profile of the tumour into account can help to enhance the clinical management prospectively and to smooth the way to better response prediction. |
doi_str_mv | 10.1007/s00428-017-2133-z |
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Still, the reasons for the rather poor efficacy remain largely unknown. A clear stratification of patients based on new biomarkers seems to be a promising approach to enhance clinical management, which would be a long-needed improvement for MPM patients but does not seem likely soon unless new biomarkers can be validated. Twenty-four formalin-fixed, paraffin-embedded (FFPE) tumour specimens were subjected to a miRNA expression screening of 800 important miRNAs using digital quantification via the nCounter technique (NanoString). We defined a small subset of miRNAs regulating the key enzymes involved in the repair of platin-associated DNA damage. Particularly, the TP53 pathway network for DNA damage recognition as well as genes related to the term “BRCAness” are the main miRNA targets within this context. The TP53 pathway network for DNA damage recognition as well as genes related to the term “BRCAness” are the main players for risk stratification in patients suffering from this severe disease. Taking the specific molecular profile of the tumour into account can help to enhance the clinical management prospectively and to smooth the way to better response prediction.</description><identifier>ISSN: 0945-6317</identifier><identifier>EISSN: 1432-2307</identifier><identifier>DOI: 10.1007/s00428-017-2133-z</identifier><identifier>PMID: 28466156</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Aged ; Biomarkers ; Biomarkers, Tumor - genetics ; Damage ; Deoxyribonucleic acid ; DNA ; DNA damage ; DNA Damage - genetics ; DNA repair ; DNA Repair - genetics ; Enzymes ; Female ; Formaldehyde ; Gene Expression Profiling ; Gene Expression Regulation, Neoplastic - genetics ; Genes ; Humans ; In Situ Hybridization ; Lung Neoplasms - genetics ; Lung Neoplasms - pathology ; Male ; Medicine ; Medicine & Public Health ; Mesothelioma ; Mesothelioma - genetics ; Mesothelioma - pathology ; Mesothelioma, Malignant ; MicroRNAs - genetics ; Middle Aged ; miRNA ; Original Article ; p53 Protein ; Paraffin ; Pathology ; Patients ; Players ; Pleural Neoplasms - genetics ; Pleural Neoplasms - pathology ; Recognition ; Repair ; Transcriptome ; Tumors</subject><ispartof>Virchows Archiv : an international journal of pathology, 2017-06, Vol.470 (6), p.627-637</ispartof><rights>Springer-Verlag Berlin Heidelberg 2017</rights><rights>Virchows Archiv is a copyright of Springer, 2017.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c438t-f5a0acbf56390f8c3295a3f46fbfe0304066e9a42402eb146ed630bcbd6d641b3</citedby><cites>FETCH-LOGICAL-c438t-f5a0acbf56390f8c3295a3f46fbfe0304066e9a42402eb146ed630bcbd6d641b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00428-017-2133-z$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00428-017-2133-z$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27922,27923,41486,42555,51317</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28466156$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Mairinger, Fabian Dominik</creatorcontrib><creatorcontrib>Werner, Robert</creatorcontrib><creatorcontrib>Flom, Elena</creatorcontrib><creatorcontrib>Schmeller, Jan</creatorcontrib><creatorcontrib>Borchert, Sabrina</creatorcontrib><creatorcontrib>Wessolly, Michael</creatorcontrib><creatorcontrib>Wohlschlaeger, Jeremias</creatorcontrib><creatorcontrib>Hager, Thomas</creatorcontrib><creatorcontrib>Mairinger, Thomas</creatorcontrib><creatorcontrib>Kollmeier, Jens</creatorcontrib><creatorcontrib>Christoph, Daniel Christian</creatorcontrib><creatorcontrib>Schmid, Kurt Werner</creatorcontrib><creatorcontrib>Walter, Robert Fred Henry</creatorcontrib><title>miRNA regulation is important for DNA damage repair and recognition in malignant pleural mesothelioma</title><title>Virchows Archiv : an international journal of pathology</title><addtitle>Virchows Arch</addtitle><addtitle>Virchows Arch</addtitle><description>Platin-containing regimes are currently considered as state-of-the-art therapies in malignant pleural mesotheliomas (MPM) but show dissatisfying response rates ranging from 6 to 16% only. Still, the reasons for the rather poor efficacy remain largely unknown. A clear stratification of patients based on new biomarkers seems to be a promising approach to enhance clinical management, which would be a long-needed improvement for MPM patients but does not seem likely soon unless new biomarkers can be validated. Twenty-four formalin-fixed, paraffin-embedded (FFPE) tumour specimens were subjected to a miRNA expression screening of 800 important miRNAs using digital quantification via the nCounter technique (NanoString). We defined a small subset of miRNAs regulating the key enzymes involved in the repair of platin-associated DNA damage. Particularly, the TP53 pathway network for DNA damage recognition as well as genes related to the term “BRCAness” are the main miRNA targets within this context. The TP53 pathway network for DNA damage recognition as well as genes related to the term “BRCAness” are the main players for risk stratification in patients suffering from this severe disease. Taking the specific molecular profile of the tumour into account can help to enhance the clinical management prospectively and to smooth the way to better response prediction.</description><subject>Aged</subject><subject>Biomarkers</subject><subject>Biomarkers, Tumor - genetics</subject><subject>Damage</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA damage</subject><subject>DNA Damage - genetics</subject><subject>DNA repair</subject><subject>DNA Repair - genetics</subject><subject>Enzymes</subject><subject>Female</subject><subject>Formaldehyde</subject><subject>Gene Expression Profiling</subject><subject>Gene Expression Regulation, Neoplastic - genetics</subject><subject>Genes</subject><subject>Humans</subject><subject>In Situ Hybridization</subject><subject>Lung Neoplasms - genetics</subject><subject>Lung Neoplasms - pathology</subject><subject>Male</subject><subject>Medicine</subject><subject>Medicine & Public Health</subject><subject>Mesothelioma</subject><subject>Mesothelioma - genetics</subject><subject>Mesothelioma - pathology</subject><subject>Mesothelioma, Malignant</subject><subject>MicroRNAs - genetics</subject><subject>Middle Aged</subject><subject>miRNA</subject><subject>Original Article</subject><subject>p53 Protein</subject><subject>Paraffin</subject><subject>Pathology</subject><subject>Patients</subject><subject>Players</subject><subject>Pleural Neoplasms - genetics</subject><subject>Pleural Neoplasms - pathology</subject><subject>Recognition</subject><subject>Repair</subject><subject>Transcriptome</subject><subject>Tumors</subject><issn>0945-6317</issn><issn>1432-2307</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1kc1O3TAQha0KVC60D9ANisSmm5TxT3yTJYK2VEIgoXZtOck4GMV2aicLeHp8lVuEKrGakeY7Z0ZzCPlC4RsF2J4nAMHqEui2ZJTz8vkD2VDBWck4bA_IBhpRlZLT7RE5TukRgNGayo_kiNVCSlrJDUFn728viojDMurZBl_YVFg3hThrPxcmxOIqz3vt9IAZm7SNhfZ9brsweLtKfOH0aAe_k0wjLlGPhcMU5gccbXD6Ezk0ekz4eV9PyJ8f339fXpc3dz9_XV7clJ3g9VyaSoPuWlNJ3oCpO86aSnMjpGkNAgcBUmKjBRPAsKVCYi85tF3by14K2vIT8nX1nWL4u2CalbOpw3HUHsOSFK0b0dCqZiyjZ_-hj2GJPl-naAOsZvltkCm6Ul0MKUU0aorW6fikKKhdBmrNQOUM1C4D9Zw1p3vnpXXYvyr-PT0DbAVSHvkB45vV77q-APpOklk</recordid><startdate>20170601</startdate><enddate>20170601</enddate><creator>Mairinger, Fabian Dominik</creator><creator>Werner, Robert</creator><creator>Flom, Elena</creator><creator>Schmeller, Jan</creator><creator>Borchert, Sabrina</creator><creator>Wessolly, Michael</creator><creator>Wohlschlaeger, Jeremias</creator><creator>Hager, Thomas</creator><creator>Mairinger, Thomas</creator><creator>Kollmeier, Jens</creator><creator>Christoph, Daniel Christian</creator><creator>Schmid, Kurt Werner</creator><creator>Walter, Robert Fred Henry</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7RV</scope><scope>7T5</scope><scope>7T7</scope><scope>7TM</scope><scope>7TO</scope><scope>7U7</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB0</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>NAPCQ</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>7X8</scope></search><sort><creationdate>20170601</creationdate><title>miRNA regulation is important for DNA damage repair and recognition in malignant pleural mesothelioma</title><author>Mairinger, Fabian Dominik ; Werner, Robert ; Flom, Elena ; Schmeller, Jan ; Borchert, Sabrina ; Wessolly, Michael ; Wohlschlaeger, Jeremias ; Hager, Thomas ; Mairinger, Thomas ; Kollmeier, Jens ; Christoph, Daniel Christian ; Schmid, Kurt Werner ; Walter, Robert Fred Henry</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c438t-f5a0acbf56390f8c3295a3f46fbfe0304066e9a42402eb146ed630bcbd6d641b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Aged</topic><topic>Biomarkers</topic><topic>Biomarkers, Tumor - 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Academic</collection><jtitle>Virchows Archiv : an international journal of pathology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Mairinger, Fabian Dominik</au><au>Werner, Robert</au><au>Flom, Elena</au><au>Schmeller, Jan</au><au>Borchert, Sabrina</au><au>Wessolly, Michael</au><au>Wohlschlaeger, Jeremias</au><au>Hager, Thomas</au><au>Mairinger, Thomas</au><au>Kollmeier, Jens</au><au>Christoph, Daniel Christian</au><au>Schmid, Kurt Werner</au><au>Walter, Robert Fred Henry</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>miRNA regulation is important for DNA damage repair and recognition in malignant pleural mesothelioma</atitle><jtitle>Virchows Archiv : an international journal of pathology</jtitle><stitle>Virchows Arch</stitle><addtitle>Virchows Arch</addtitle><date>2017-06-01</date><risdate>2017</risdate><volume>470</volume><issue>6</issue><spage>627</spage><epage>637</epage><pages>627-637</pages><issn>0945-6317</issn><eissn>1432-2307</eissn><abstract>Platin-containing regimes are currently considered as state-of-the-art therapies in malignant pleural mesotheliomas (MPM) but show dissatisfying response rates ranging from 6 to 16% only. Still, the reasons for the rather poor efficacy remain largely unknown. A clear stratification of patients based on new biomarkers seems to be a promising approach to enhance clinical management, which would be a long-needed improvement for MPM patients but does not seem likely soon unless new biomarkers can be validated. Twenty-four formalin-fixed, paraffin-embedded (FFPE) tumour specimens were subjected to a miRNA expression screening of 800 important miRNAs using digital quantification via the nCounter technique (NanoString). We defined a small subset of miRNAs regulating the key enzymes involved in the repair of platin-associated DNA damage. Particularly, the TP53 pathway network for DNA damage recognition as well as genes related to the term “BRCAness” are the main miRNA targets within this context. The TP53 pathway network for DNA damage recognition as well as genes related to the term “BRCAness” are the main players for risk stratification in patients suffering from this severe disease. Taking the specific molecular profile of the tumour into account can help to enhance the clinical management prospectively and to smooth the way to better response prediction.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>28466156</pmid><doi>10.1007/s00428-017-2133-z</doi><tpages>11</tpages></addata></record> |
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subjects | Aged Biomarkers Biomarkers, Tumor - genetics Damage Deoxyribonucleic acid DNA DNA damage DNA Damage - genetics DNA repair DNA Repair - genetics Enzymes Female Formaldehyde Gene Expression Profiling Gene Expression Regulation, Neoplastic - genetics Genes Humans In Situ Hybridization Lung Neoplasms - genetics Lung Neoplasms - pathology Male Medicine Medicine & Public Health Mesothelioma Mesothelioma - genetics Mesothelioma - pathology Mesothelioma, Malignant MicroRNAs - genetics Middle Aged miRNA Original Article p53 Protein Paraffin Pathology Patients Players Pleural Neoplasms - genetics Pleural Neoplasms - pathology Recognition Repair Transcriptome Tumors |
title | miRNA regulation is important for DNA damage repair and recognition in malignant pleural mesothelioma |
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