Complete genome sequence of a new isolate of potato virus M in Yunnan, China

The complete genome sequence of a new potato virus M (PVM) isolate (PVM-YN), collected from potato ( Solanum tuberosum ) in Yunnan, China, was determined. It was 8,530 nucleotides (nt) in length, excluding the poly(A) tail at the 3′ end, and shared 71.4–72.0% nucleotide sequence identity with availa...

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Veröffentlicht in:	Archives of virology 2017-08, Vol.162 (8), p.2485-2488
Hauptverfasser:	Su, Xiaoxia, Wu, Kuo, Zhang, Li Zhen, Rahman, Mohammad Siddiqur, Zheng, Kuanyu, Li, Ting, Zhang, Zhongkai, Dong, Jiahong
Format:	Artikel
Sprache:	eng
Schlagworte:	Amino acid sequence Annotated Sequence Record Biomedical and Life Sciences Biomedicine Capsid Proteins - genetics Carlavirus - genetics Carlavirus - isolation & purification China Genome, Viral Genomes Infectious Diseases Medical Microbiology Nucleotide sequence Phylogeny Plant Diseases - virology Poly(A) Polyadenylation Potatoes RNA, Viral - genetics Sequence Analysis, DNA Sequence Homology, Amino Acid Solanum tuberosum - virology Virology
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Zusammenfassung:	The complete genome sequence of a new potato virus M (PVM) isolate (PVM-YN), collected from potato ( Solanum tuberosum ) in Yunnan, China, was determined. It was 8,530 nucleotides (nt) in length, excluding the poly(A) tail at the 3′ end, and shared 71.4–72.0% nucleotide sequence identity with available PVM isolates in the NCBI database. The coat proteins (CP) of PVM-YN shared 79.0–97.4% amino acid sequence identity with that of other isolates. It is the first report of the complete genomic sequence of a new PVM isolate infecting S. tuberosum in China.
ISSN:	0304-8608 1432-8798
DOI:	10.1007/s00705-017-3380-7