Identification of Arabidopsis genic and non‐genic promoters by paired‐end sequencing of TSS tags

Summary Information about transcription start sites (TSSs) provides baseline data for the analysis of promoter architecture. In this paper we used paired‐ and single‐end deep sequencing to analyze Arabidopsis TSS tags from several libraries prepared from roots, shoots, flowers and etiolated seedling...

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Veröffentlicht in:	The Plant journal : for cell and molecular biology 2017-05, Vol.90 (3), p.587-605
Hauptverfasser:	Tokizawa, Mutsutomo, Kusunoki, Kazutaka, Koyama, Hiroyuki, Kurotani, Atsushi, Sakurai, Tetsuya, Suzuki, Yutaka, Sakamoto, Tomoaki, Kurata, Tetsuya, Yamamoto, Yoshiharu Y.
Format:	Artikel
Sprache:	eng
Schlagworte:	Antisense RNA Arabidopsis Arabidopsis - genetics Arabidopsis Proteins - genetics Arabidopsis thaliana Base composition Clustering core promoter element Data processing Flowers Gene expression Gene Expression Regulation, Plant - genetics Gene Expression Regulation, Plant - physiology Gene polymorphism Gene sequencing Genes Genomes Libraries Polymorphism promoter promoter maturation Promoter Regions, Genetic - genetics Promoters Seedlings Shoots Single-nucleotide polymorphism Tags Transcription initiation Transcription Initiation Site - physiology transcription start site transcriptional regulation TSS‐seq
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