Molecular systematics reveals increased diversity within the South African Laurencia complex (Rhodomelaceae, Rhodophyta)
Previous publications list ten species in the Laurencia complex from South Africa with all ascribed to the genus Laurencia sensu stricto. However, the diversity of the complex in South Africa has not yet been re‐assessed following the numerous recent taxonomic changes. This study investigated the ph...
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Veröffentlicht in: | Journal of phycology 2017-08, Vol.53 (4), p.804-819 |
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description | Previous publications list ten species in the Laurencia complex from South Africa with all ascribed to the genus Laurencia sensu stricto. However, the diversity of the complex in South Africa has not yet been re‐assessed following the numerous recent taxonomic changes. This study investigated the phylogenetic relationships and taxonomy of this group in South Africa using recent collections. Methods included molecular phylogenetic analyses of plastid rbcL gene sequences (a total of 146; including eleven outgroup taxa) using Maximum Likelihood and Bayesian Inference, and the examination of morphological and anatomical characters, including the number of corps en cerise when present. The seven genera of the Laurencia complex formed monophyletic clades with high posterior probabilities. Seventeen morphotypes were identified: 14 in the genus Laurencia sensu stricto, among which eight corresponded to Laurencia species currently recognized from South Africa and one each to species of Palisada, Chondrophycus, and Laurenciella. The six remaining morphotypes in Laurencia sensu stricto did not match any descriptions and are described here as five new species: Laurencia alfredensis sp. nov., Laurencia dichotoma sp. nov., Laurencia digitata sp. nov., Laurencia multiclavata sp. nov. and Laurencia sodwaniensis sp. nov. and a new variety: Laurencia pumila var. dehoopiensis var. nov. Laurencia stegengae nom. nov. is established to replace Laurencia peninsularis Stegenga, Bolton and Anderson nom. illeg. The diversity is likely greater, with six additional unidentified specimens found in this molecular investigation. These findings place South Africa alongside Australia in having one of the most diverse floras of this group in the world. |
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However, the diversity of the complex in South Africa has not yet been re‐assessed following the numerous recent taxonomic changes. This study investigated the phylogenetic relationships and taxonomy of this group in South Africa using recent collections. Methods included molecular phylogenetic analyses of plastid rbcL gene sequences (a total of 146; including eleven outgroup taxa) using Maximum Likelihood and Bayesian Inference, and the examination of morphological and anatomical characters, including the number of corps en cerise when present. The seven genera of the Laurencia complex formed monophyletic clades with high posterior probabilities. Seventeen morphotypes were identified: 14 in the genus Laurencia sensu stricto, among which eight corresponded to Laurencia species currently recognized from South Africa and one each to species of Palisada, Chondrophycus, and Laurenciella. The six remaining morphotypes in Laurencia sensu stricto did not match any descriptions and are described here as five new species: Laurencia alfredensis sp. nov., Laurencia dichotoma sp. nov., Laurencia digitata sp. nov., Laurencia multiclavata sp. nov. and Laurencia sodwaniensis sp. nov. and a new variety: Laurencia pumila var. dehoopiensis var. nov. Laurencia stegengae nom. nov. is established to replace Laurencia peninsularis Stegenga, Bolton and Anderson nom. illeg. The diversity is likely greater, with six additional unidentified specimens found in this molecular investigation. These findings place South Africa alongside Australia in having one of the most diverse floras of this group in the world.</description><identifier>ISSN: 0022-3646</identifier><identifier>EISSN: 1529-8817</identifier><identifier>DOI: 10.1111/jpy.12543</identifier><identifier>PMID: 28434205</identifier><language>eng</language><publisher>United States: Wiley Subscription Services, Inc</publisher><subject>Bayesian analysis ; Biodiversity ; Collections ; diversity ; Documents ; Evolution, Molecular ; Gene sequencing ; Genera ; Genetic Variation ; Laurencia - classification ; Laurencia - genetics ; Laurencia complex ; New species ; New variety ; Phylogenetics ; Phylogeny ; Physical characteristics ; Plastids ; Probability theory ; rbcL ; RbcL gene ; Rhodomelaceae ; Sequence Analysis, DNA ; South Africa ; Statistical inference ; Systematics ; Taxa ; Taxonomy</subject><ispartof>Journal of phycology, 2017-08, Vol.53 (4), p.804-819</ispartof><rights>2017 Phycological Society of America</rights><rights>2017 Phycological Society of America.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4193-4ca0f14da60ebe2eb4119ae19a5d77b15c110d99844701784335fe1f267953393</citedby><cites>FETCH-LOGICAL-c4193-4ca0f14da60ebe2eb4119ae19a5d77b15c110d99844701784335fe1f267953393</cites><orcidid>0000-0003-4481-2898</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fjpy.12543$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fjpy.12543$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,27901,27902,45550,45551</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28434205$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Francis, Caitlynne</creatorcontrib><creatorcontrib>Bolton, John J.</creatorcontrib><creatorcontrib>Mattio, Lydiane</creatorcontrib><creatorcontrib>Mandiwana‐Neudani, Tshifhiwa G.</creatorcontrib><creatorcontrib>Anderson, Robert J.</creatorcontrib><creatorcontrib>Müller, K.</creatorcontrib><title>Molecular systematics reveals increased diversity within the South African Laurencia complex (Rhodomelaceae, Rhodophyta)</title><title>Journal of phycology</title><addtitle>J Phycol</addtitle><description>Previous publications list ten species in the Laurencia complex from South Africa with all ascribed to the genus Laurencia sensu stricto. However, the diversity of the complex in South Africa has not yet been re‐assessed following the numerous recent taxonomic changes. This study investigated the phylogenetic relationships and taxonomy of this group in South Africa using recent collections. Methods included molecular phylogenetic analyses of plastid rbcL gene sequences (a total of 146; including eleven outgroup taxa) using Maximum Likelihood and Bayesian Inference, and the examination of morphological and anatomical characters, including the number of corps en cerise when present. The seven genera of the Laurencia complex formed monophyletic clades with high posterior probabilities. Seventeen morphotypes were identified: 14 in the genus Laurencia sensu stricto, among which eight corresponded to Laurencia species currently recognized from South Africa and one each to species of Palisada, Chondrophycus, and Laurenciella. The six remaining morphotypes in Laurencia sensu stricto did not match any descriptions and are described here as five new species: Laurencia alfredensis sp. nov., Laurencia dichotoma sp. nov., Laurencia digitata sp. nov., Laurencia multiclavata sp. nov. and Laurencia sodwaniensis sp. nov. and a new variety: Laurencia pumila var. dehoopiensis var. nov. Laurencia stegengae nom. nov. is established to replace Laurencia peninsularis Stegenga, Bolton and Anderson nom. illeg. The diversity is likely greater, with six additional unidentified specimens found in this molecular investigation. These findings place South Africa alongside Australia in having one of the most diverse floras of this group in the world.</description><subject>Bayesian analysis</subject><subject>Biodiversity</subject><subject>Collections</subject><subject>diversity</subject><subject>Documents</subject><subject>Evolution, Molecular</subject><subject>Gene sequencing</subject><subject>Genera</subject><subject>Genetic Variation</subject><subject>Laurencia - classification</subject><subject>Laurencia - genetics</subject><subject>Laurencia complex</subject><subject>New species</subject><subject>New variety</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Physical characteristics</subject><subject>Plastids</subject><subject>Probability theory</subject><subject>rbcL</subject><subject>RbcL gene</subject><subject>Rhodomelaceae</subject><subject>Sequence Analysis, DNA</subject><subject>South Africa</subject><subject>Statistical inference</subject><subject>Systematics</subject><subject>Taxa</subject><subject>Taxonomy</subject><issn>0022-3646</issn><issn>1529-8817</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kVFL3TAUx8PYmFfdw77ACOxFYdWcNmmaR5GpG1ccbnvwKeSmpzSXtumSVu23X-Z1Pgx2IBwCP345J39C3gM7gVSn23E5gVzw4hVZgchVVlUgX5MVY3meFSUv98h-jFvGmCwFvCV7ecULnjOxIo_XvkM7dybQuMQJezM5G2nAezRdpG6wAU3EmtbuHkN000If3NS6gU4t0u9-nlp61gRnzUDXZg44WGeo9f3Y4SM9um197XvsjEWDn-jTdWyXyRwfkjdNegHfPfcD8vPi84_zq2x9c_nl_GydWQ6qyLg1rAFem5LhBnPccABlMB1RS7kBYQFYrVTFuWQg016FaBCavJRKFIUqDsjRzjsG_2vGOOneRYtdZwb0c9RQKeCikhwS-vEfdOvnMKTpNKgklKwSLFHHO8oGH2PARo_B9SYsGpj-E4dOceinOBL74dk4b3qsX8i__5-A0x3w4Dpc_m_SX7_d7ZS_ARSPlIc</recordid><startdate>201708</startdate><enddate>201708</enddate><creator>Francis, Caitlynne</creator><creator>Bolton, John J.</creator><creator>Mattio, Lydiane</creator><creator>Mandiwana‐Neudani, Tshifhiwa G.</creator><creator>Anderson, Robert J.</creator><creator>Müller, K.</creator><general>Wiley Subscription Services, Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TN</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope><scope>M7N</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-4481-2898</orcidid></search><sort><creationdate>201708</creationdate><title>Molecular systematics reveals increased diversity within the South African Laurencia complex (Rhodomelaceae, Rhodophyta)</title><author>Francis, Caitlynne ; Bolton, John J. ; Mattio, Lydiane ; Mandiwana‐Neudani, Tshifhiwa G. ; Anderson, Robert J. ; Müller, K.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4193-4ca0f14da60ebe2eb4119ae19a5d77b15c110d99844701784335fe1f267953393</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Bayesian analysis</topic><topic>Biodiversity</topic><topic>Collections</topic><topic>diversity</topic><topic>Documents</topic><topic>Evolution, Molecular</topic><topic>Gene sequencing</topic><topic>Genera</topic><topic>Genetic Variation</topic><topic>Laurencia - classification</topic><topic>Laurencia - genetics</topic><topic>Laurencia complex</topic><topic>New species</topic><topic>New variety</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>Physical characteristics</topic><topic>Plastids</topic><topic>Probability theory</topic><topic>rbcL</topic><topic>RbcL gene</topic><topic>Rhodomelaceae</topic><topic>Sequence Analysis, DNA</topic><topic>South Africa</topic><topic>Statistical inference</topic><topic>Systematics</topic><topic>Taxa</topic><topic>Taxonomy</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Francis, Caitlynne</creatorcontrib><creatorcontrib>Bolton, John J.</creatorcontrib><creatorcontrib>Mattio, Lydiane</creatorcontrib><creatorcontrib>Mandiwana‐Neudani, Tshifhiwa G.</creatorcontrib><creatorcontrib>Anderson, Robert J.</creatorcontrib><creatorcontrib>Müller, K.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Oceanic Abstracts</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of phycology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Francis, Caitlynne</au><au>Bolton, John J.</au><au>Mattio, Lydiane</au><au>Mandiwana‐Neudani, Tshifhiwa G.</au><au>Anderson, Robert J.</au><au>Müller, K.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular systematics reveals increased diversity within the South African Laurencia complex (Rhodomelaceae, Rhodophyta)</atitle><jtitle>Journal of phycology</jtitle><addtitle>J Phycol</addtitle><date>2017-08</date><risdate>2017</risdate><volume>53</volume><issue>4</issue><spage>804</spage><epage>819</epage><pages>804-819</pages><issn>0022-3646</issn><eissn>1529-8817</eissn><abstract>Previous publications list ten species in the Laurencia complex from South Africa with all ascribed to the genus Laurencia sensu stricto. However, the diversity of the complex in South Africa has not yet been re‐assessed following the numerous recent taxonomic changes. This study investigated the phylogenetic relationships and taxonomy of this group in South Africa using recent collections. Methods included molecular phylogenetic analyses of plastid rbcL gene sequences (a total of 146; including eleven outgroup taxa) using Maximum Likelihood and Bayesian Inference, and the examination of morphological and anatomical characters, including the number of corps en cerise when present. The seven genera of the Laurencia complex formed monophyletic clades with high posterior probabilities. Seventeen morphotypes were identified: 14 in the genus Laurencia sensu stricto, among which eight corresponded to Laurencia species currently recognized from South Africa and one each to species of Palisada, Chondrophycus, and Laurenciella. The six remaining morphotypes in Laurencia sensu stricto did not match any descriptions and are described here as five new species: Laurencia alfredensis sp. nov., Laurencia dichotoma sp. nov., Laurencia digitata sp. nov., Laurencia multiclavata sp. nov. and Laurencia sodwaniensis sp. nov. and a new variety: Laurencia pumila var. dehoopiensis var. nov. Laurencia stegengae nom. nov. is established to replace Laurencia peninsularis Stegenga, Bolton and Anderson nom. illeg. The diversity is likely greater, with six additional unidentified specimens found in this molecular investigation. These findings place South Africa alongside Australia in having one of the most diverse floras of this group in the world.</abstract><cop>United States</cop><pub>Wiley Subscription Services, Inc</pub><pmid>28434205</pmid><doi>10.1111/jpy.12543</doi><tpages>16</tpages><orcidid>https://orcid.org/0000-0003-4481-2898</orcidid></addata></record> |
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subjects | Bayesian analysis Biodiversity Collections diversity Documents Evolution, Molecular Gene sequencing Genera Genetic Variation Laurencia - classification Laurencia - genetics Laurencia complex New species New variety Phylogenetics Phylogeny Physical characteristics Plastids Probability theory rbcL RbcL gene Rhodomelaceae Sequence Analysis, DNA South Africa Statistical inference Systematics Taxa Taxonomy |
title | Molecular systematics reveals increased diversity within the South African Laurencia complex (Rhodomelaceae, Rhodophyta) |
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