The salt‐regulated element in the promoter of lycopene β‐cyclase gene confers a salt regulatory pattern in carotenogenesis of Dunaliella bardawil
Summary In the carotenoid biosynthesis, lycopene β‐cyclase (LCYb) is a key regulatory enzyme involved in the conversion of lycopene into β‐carotene. Under stress conditions, such as high salinity, high light and nutrient deprivation, large amounts of β‐carotene can be accumulated in Dunaliella barda...
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Veröffentlicht in: | Environmental microbiology 2017-03, Vol.19 (3), p.982-989 |
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In the carotenoid biosynthesis, lycopene β‐cyclase (LCYb) is a key regulatory enzyme involved in the conversion of lycopene into β‐carotene. Under stress conditions, such as high salinity, high light and nutrient deprivation, large amounts of β‐carotene can be accumulated in Dunaliella bardawil. To study on the molecular responses of salt stress in D. bardawil is of great significance to reveal the mechanisms of salt tolerance and engineer crop plants to be salt‐tolerant. In this study, the full‐length coding sequence of lcyb from D. bardawil (Dblcyb, GenBank: KX218392) was isolated by transcriptome sequencing. Then, the genomic sequence, promoter and terminator regions of Dblcyb were isolated by genome walking. The Dblcyb promoter (GenBank: KX218393) contained several typical transcription boxes, multiple light response elements and a salt‐regulated element (SRE, GT1GMSCAM4). Dbpsy and Dblcyb responsible for β‐carotene biosynthesis in D. bardawil was shown to be up‐regulated under salt stress and their promoters contained the common SRE. By element deletion analysis and using Ble‐EGFP as the reporter, the salt‐inducible SRE was confirmed to confer salt‐induced expression of Dblcyb promoter. It was indicated that the salt‐regulated expression of Dblcyb may be attributed to the salt‐responsive element (GT1GMSCAM4) and the GT‐rich region in its genomic sequence. |
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In the carotenoid biosynthesis, lycopene β‐cyclase (LCYb) is a key regulatory enzyme involved in the conversion of lycopene into β‐carotene. Under stress conditions, such as high salinity, high light and nutrient deprivation, large amounts of β‐carotene can be accumulated in Dunaliella bardawil. To study on the molecular responses of salt stress in D. bardawil is of great significance to reveal the mechanisms of salt tolerance and engineer crop plants to be salt‐tolerant. In this study, the full‐length coding sequence of lcyb from D. bardawil (Dblcyb, GenBank: KX218392) was isolated by transcriptome sequencing. Then, the genomic sequence, promoter and terminator regions of Dblcyb were isolated by genome walking. The Dblcyb promoter (GenBank: KX218393) contained several typical transcription boxes, multiple light response elements and a salt‐regulated element (SRE, GT1GMSCAM4). Dbpsy and Dblcyb responsible for β‐carotene biosynthesis in D. bardawil was shown to be up‐regulated under salt stress and their promoters contained the common SRE. By element deletion analysis and using Ble‐EGFP as the reporter, the salt‐inducible SRE was confirmed to confer salt‐induced expression of Dblcyb promoter. It was indicated that the salt‐regulated expression of Dblcyb may be attributed to the salt‐responsive element (GT1GMSCAM4) and the GT‐rich region in its genomic sequence.</description><identifier>ISSN: 1462-2912</identifier><identifier>EISSN: 1462-2920</identifier><identifier>DOI: 10.1111/1462-2920.13539</identifier><identifier>PMID: 27657551</identifier><language>eng</language><publisher>England</publisher><subject>beta Carotene - biosynthesis ; Carotenoids - metabolism ; Chlorophyta - enzymology ; Chlorophyta - genetics ; Dunaliella bardawil ; Gene Expression Regulation, Bacterial ; Gene Expression Regulation, Enzymologic ; Intramolecular Lyases - genetics ; Intramolecular Lyases - metabolism ; Molecular Sequence Data ; Promoter Regions, Genetic ; Salt-Tolerance ; Sodium Chloride - metabolism</subject><ispartof>Environmental microbiology, 2017-03, Vol.19 (3), p.982-989</ispartof><rights>2016 Society for Applied Microbiology and John Wiley & Sons Ltd</rights><rights>2016 Society for Applied Microbiology and John Wiley & Sons Ltd.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c2919-da86060ab7db6e0919d65b112b96f77c6210c20c37ac5320a30e67411de079db3</citedby><cites>FETCH-LOGICAL-c2919-da86060ab7db6e0919d65b112b96f77c6210c20c37ac5320a30e67411de079db3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2F1462-2920.13539$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2F1462-2920.13539$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,27901,27902,45550,45551</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27657551$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Liang, Ming‐Hua</creatorcontrib><creatorcontrib>Lu, Yan</creatorcontrib><creatorcontrib>Chen, Hao‐Hong</creatorcontrib><creatorcontrib>Jiang, Jian‐Guo</creatorcontrib><title>The salt‐regulated element in the promoter of lycopene β‐cyclase gene confers a salt regulatory pattern in carotenogenesis of Dunaliella bardawil</title><title>Environmental microbiology</title><addtitle>Environ Microbiol</addtitle><description>Summary
In the carotenoid biosynthesis, lycopene β‐cyclase (LCYb) is a key regulatory enzyme involved in the conversion of lycopene into β‐carotene. Under stress conditions, such as high salinity, high light and nutrient deprivation, large amounts of β‐carotene can be accumulated in Dunaliella bardawil. To study on the molecular responses of salt stress in D. bardawil is of great significance to reveal the mechanisms of salt tolerance and engineer crop plants to be salt‐tolerant. In this study, the full‐length coding sequence of lcyb from D. bardawil (Dblcyb, GenBank: KX218392) was isolated by transcriptome sequencing. Then, the genomic sequence, promoter and terminator regions of Dblcyb were isolated by genome walking. The Dblcyb promoter (GenBank: KX218393) contained several typical transcription boxes, multiple light response elements and a salt‐regulated element (SRE, GT1GMSCAM4). Dbpsy and Dblcyb responsible for β‐carotene biosynthesis in D. bardawil was shown to be up‐regulated under salt stress and their promoters contained the common SRE. By element deletion analysis and using Ble‐EGFP as the reporter, the salt‐inducible SRE was confirmed to confer salt‐induced expression of Dblcyb promoter. It was indicated that the salt‐regulated expression of Dblcyb may be attributed to the salt‐responsive element (GT1GMSCAM4) and the GT‐rich region in its genomic sequence.</description><subject>beta Carotene - biosynthesis</subject><subject>Carotenoids - metabolism</subject><subject>Chlorophyta - enzymology</subject><subject>Chlorophyta - genetics</subject><subject>Dunaliella bardawil</subject><subject>Gene Expression Regulation, Bacterial</subject><subject>Gene Expression Regulation, Enzymologic</subject><subject>Intramolecular Lyases - genetics</subject><subject>Intramolecular Lyases - metabolism</subject><subject>Molecular Sequence Data</subject><subject>Promoter Regions, Genetic</subject><subject>Salt-Tolerance</subject><subject>Sodium Chloride - metabolism</subject><issn>1462-2912</issn><issn>1462-2920</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkc1OxCAUhYnR6PizdmdYuhkH6ADt0oy_yRg3uiaU3moNLSO0Md35CK58EB_Eh_BJpM44W2UD93LOFy4HoUNKTmhcEzoVbMwyFsuEJ9kGGq07m-szZTtoN4QnQqhMJNlGO0wKLjmnI_R-9wg4aNt-vb55eOisbqHAYKGGpsVVg9t4v_Cudi147Epse-MW0AD-_IgW0xurA-CHoWNcU4IPWP8A8QrnfI8Xuo32ZuAZ7SOqcYMjVGFAnnWNthVYq3GufaFfKruPtkptAxys9j10f3F-N7saz28vr2en87GJY2XjQqeCCKJzWeQCSGwVgueUsjwTpZRGMEoMIyaR2vCEEZ0QEHJKaQFEZkWe7KHjJTeO-NxBaFVdBTM8pQHXBUXTNM1kNk3Tf0gTzhmZkixKJ0up8S4ED6Va-KrWvleUqCE3NSSjhpTUT27RcbSCd3kNxVr_G1QU8KUgfg70f_HU-c31EvwNeGmmog</recordid><startdate>201703</startdate><enddate>201703</enddate><creator>Liang, Ming‐Hua</creator><creator>Lu, Yan</creator><creator>Chen, Hao‐Hong</creator><creator>Jiang, Jian‐Guo</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QL</scope><scope>7ST</scope><scope>C1K</scope><scope>M7N</scope><scope>SOI</scope></search><sort><creationdate>201703</creationdate><title>The salt‐regulated element in the promoter of lycopene β‐cyclase gene confers a salt regulatory pattern in carotenogenesis of Dunaliella bardawil</title><author>Liang, Ming‐Hua ; Lu, Yan ; Chen, Hao‐Hong ; Jiang, Jian‐Guo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2919-da86060ab7db6e0919d65b112b96f77c6210c20c37ac5320a30e67411de079db3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>beta Carotene - biosynthesis</topic><topic>Carotenoids - metabolism</topic><topic>Chlorophyta - enzymology</topic><topic>Chlorophyta - genetics</topic><topic>Dunaliella bardawil</topic><topic>Gene Expression Regulation, Bacterial</topic><topic>Gene Expression Regulation, Enzymologic</topic><topic>Intramolecular Lyases - genetics</topic><topic>Intramolecular Lyases - metabolism</topic><topic>Molecular Sequence Data</topic><topic>Promoter Regions, Genetic</topic><topic>Salt-Tolerance</topic><topic>Sodium Chloride - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Liang, Ming‐Hua</creatorcontrib><creatorcontrib>Lu, Yan</creatorcontrib><creatorcontrib>Chen, Hao‐Hong</creatorcontrib><creatorcontrib>Jiang, Jian‐Guo</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environment Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Environment Abstracts</collection><jtitle>Environmental microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Liang, Ming‐Hua</au><au>Lu, Yan</au><au>Chen, Hao‐Hong</au><au>Jiang, Jian‐Guo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The salt‐regulated element in the promoter of lycopene β‐cyclase gene confers a salt regulatory pattern in carotenogenesis of Dunaliella bardawil</atitle><jtitle>Environmental microbiology</jtitle><addtitle>Environ Microbiol</addtitle><date>2017-03</date><risdate>2017</risdate><volume>19</volume><issue>3</issue><spage>982</spage><epage>989</epage><pages>982-989</pages><issn>1462-2912</issn><eissn>1462-2920</eissn><abstract>Summary
In the carotenoid biosynthesis, lycopene β‐cyclase (LCYb) is a key regulatory enzyme involved in the conversion of lycopene into β‐carotene. Under stress conditions, such as high salinity, high light and nutrient deprivation, large amounts of β‐carotene can be accumulated in Dunaliella bardawil. To study on the molecular responses of salt stress in D. bardawil is of great significance to reveal the mechanisms of salt tolerance and engineer crop plants to be salt‐tolerant. In this study, the full‐length coding sequence of lcyb from D. bardawil (Dblcyb, GenBank: KX218392) was isolated by transcriptome sequencing. Then, the genomic sequence, promoter and terminator regions of Dblcyb were isolated by genome walking. The Dblcyb promoter (GenBank: KX218393) contained several typical transcription boxes, multiple light response elements and a salt‐regulated element (SRE, GT1GMSCAM4). Dbpsy and Dblcyb responsible for β‐carotene biosynthesis in D. bardawil was shown to be up‐regulated under salt stress and their promoters contained the common SRE. By element deletion analysis and using Ble‐EGFP as the reporter, the salt‐inducible SRE was confirmed to confer salt‐induced expression of Dblcyb promoter. It was indicated that the salt‐regulated expression of Dblcyb may be attributed to the salt‐responsive element (GT1GMSCAM4) and the GT‐rich region in its genomic sequence.</abstract><cop>England</cop><pmid>27657551</pmid><doi>10.1111/1462-2920.13539</doi><tpages>8</tpages></addata></record> |
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subjects | beta Carotene - biosynthesis Carotenoids - metabolism Chlorophyta - enzymology Chlorophyta - genetics Dunaliella bardawil Gene Expression Regulation, Bacterial Gene Expression Regulation, Enzymologic Intramolecular Lyases - genetics Intramolecular Lyases - metabolism Molecular Sequence Data Promoter Regions, Genetic Salt-Tolerance Sodium Chloride - metabolism |
title | The salt‐regulated element in the promoter of lycopene β‐cyclase gene confers a salt regulatory pattern in carotenogenesis of Dunaliella bardawil |
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