SMA mutations in SMN Tudor and C-terminal domains destabilize the protein
Abstract Background and purpose Most spinal muscular atrophy (SMA) patients are homozygous for survival of motor neuron 1 gene ( SMN1 ) deletion. However, some SMA patients carry an intragenic SMN1 mutation. Such patients provide a clue to understanding the function of the SMN protein and the role o...
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creator | Takarada, Toru Ar Rochmah, Mawaddah Harahap, Nur Imma Fatimah Shinohara, Masakazu Saito, Toshio Saito, Kayoko Lai, Poh San Bouike, Yoshihiro Takeshima, Yasuhiro Awano, Hiroyuki Morioka, Ichiro Iijima, Kazumoto Nishio, Hisahide Takeuchi, Atsuko |
description | Abstract Background and purpose Most spinal muscular atrophy (SMA) patients are homozygous for survival of motor neuron 1 gene ( SMN1 ) deletion. However, some SMA patients carry an intragenic SMN1 mutation. Such patients provide a clue to understanding the function of the SMN protein and the role of each domain of the protein. We previously identified mutations in the Tudor domain and C-terminal region of the SMN protein in three Japanese SMA patients. To clarify the effect of these mutations on protein stability, we conducted expression assays of SMN with mutated domains. Patients and methods Patients A and B carried a mutation in SMN1 exon 3, which encodes a Tudor domain, c.275G>C (p.Trp92Ser). Patient C carried a mutation in SMN1 exon 6, which encodes a YG-box; c.819_820insT (p.Thr274Tyrfs). We constructed plasmid expression vectors containing wild-type and mutant SMN1 cDNAs. After transfection of HeLa cells with the expression plasmids, RNA and protein were isolated and analyzed by reverse-transcription PCR and western blot analysis. Results The abundance of wild-type and mutant SMN1 transcripts in HeLa cells was almost the same. However, western blot analysis showed lower levels of mutant SMN proteins compared with wild-type SMN. In mutant SMN proteins, it is noteworthy that the level of the p.Thr274Tyrfs mutant was much reduced compared with that of the p.Trp92Ser mutant. Conclusions SMN mutations may affect the stability and levels of the protein. |
doi_str_mv | 10.1016/j.braindev.2017.03.002 |
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However, some SMA patients carry an intragenic SMN1 mutation. Such patients provide a clue to understanding the function of the SMN protein and the role of each domain of the protein. We previously identified mutations in the Tudor domain and C-terminal region of the SMN protein in three Japanese SMA patients. To clarify the effect of these mutations on protein stability, we conducted expression assays of SMN with mutated domains. Patients and methods Patients A and B carried a mutation in SMN1 exon 3, which encodes a Tudor domain, c.275G>C (p.Trp92Ser). Patient C carried a mutation in SMN1 exon 6, which encodes a YG-box; c.819_820insT (p.Thr274Tyrfs). We constructed plasmid expression vectors containing wild-type and mutant SMN1 cDNAs. After transfection of HeLa cells with the expression plasmids, RNA and protein were isolated and analyzed by reverse-transcription PCR and western blot analysis. Results The abundance of wild-type and mutant SMN1 transcripts in HeLa cells was almost the same. However, western blot analysis showed lower levels of mutant SMN proteins compared with wild-type SMN. In mutant SMN proteins, it is noteworthy that the level of the p.Thr274Tyrfs mutant was much reduced compared with that of the p.Trp92Ser mutant. Conclusions SMN mutations may affect the stability and levels of the protein.</description><identifier>ISSN: 0387-7604</identifier><identifier>EISSN: 1872-7131</identifier><identifier>DOI: 10.1016/j.braindev.2017.03.002</identifier><identifier>PMID: 28366534</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>C-terminal region ; Child ; Child, Preschool ; Female ; Gene Expression ; HeLa Cells ; Humans ; Infant ; Male ; Muscular Atrophy, Spinal - genetics ; Mutation ; Neurology ; Protein Domains ; Protein Stability ; SMN mutation ; SMN stability ; Survival of Motor Neuron 1 Protein - genetics ; Survival of Motor Neuron 1 Protein - metabolism ; Tudor domain ; YG box</subject><ispartof>Brain & development (Tokyo. 1979), 2017-08, Vol.39 (7), p.606-612</ispartof><rights>The Japanese Society of Child Neurology</rights><rights>2017 The Japanese Society of Child Neurology</rights><rights>Copyright © 2017 The Japanese Society of Child Neurology. Published by Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c513t-e88e62fd43364e67fb8fb25b3e37e4b4f2dd5eb573f71940eb394a2d220657733</citedby><cites>FETCH-LOGICAL-c513t-e88e62fd43364e67fb8fb25b3e37e4b4f2dd5eb573f71940eb394a2d220657733</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0387760417300360$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28366534$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Takarada, Toru</creatorcontrib><creatorcontrib>Ar Rochmah, Mawaddah</creatorcontrib><creatorcontrib>Harahap, Nur Imma Fatimah</creatorcontrib><creatorcontrib>Shinohara, Masakazu</creatorcontrib><creatorcontrib>Saito, Toshio</creatorcontrib><creatorcontrib>Saito, Kayoko</creatorcontrib><creatorcontrib>Lai, Poh San</creatorcontrib><creatorcontrib>Bouike, Yoshihiro</creatorcontrib><creatorcontrib>Takeshima, Yasuhiro</creatorcontrib><creatorcontrib>Awano, Hiroyuki</creatorcontrib><creatorcontrib>Morioka, Ichiro</creatorcontrib><creatorcontrib>Iijima, Kazumoto</creatorcontrib><creatorcontrib>Nishio, Hisahide</creatorcontrib><creatorcontrib>Takeuchi, Atsuko</creatorcontrib><title>SMA mutations in SMN Tudor and C-terminal domains destabilize the protein</title><title>Brain & development (Tokyo. 1979)</title><addtitle>Brain Dev</addtitle><description>Abstract Background and purpose Most spinal muscular atrophy (SMA) patients are homozygous for survival of motor neuron 1 gene ( SMN1 ) deletion. However, some SMA patients carry an intragenic SMN1 mutation. Such patients provide a clue to understanding the function of the SMN protein and the role of each domain of the protein. We previously identified mutations in the Tudor domain and C-terminal region of the SMN protein in three Japanese SMA patients. To clarify the effect of these mutations on protein stability, we conducted expression assays of SMN with mutated domains. Patients and methods Patients A and B carried a mutation in SMN1 exon 3, which encodes a Tudor domain, c.275G>C (p.Trp92Ser). Patient C carried a mutation in SMN1 exon 6, which encodes a YG-box; c.819_820insT (p.Thr274Tyrfs). We constructed plasmid expression vectors containing wild-type and mutant SMN1 cDNAs. After transfection of HeLa cells with the expression plasmids, RNA and protein were isolated and analyzed by reverse-transcription PCR and western blot analysis. Results The abundance of wild-type and mutant SMN1 transcripts in HeLa cells was almost the same. However, western blot analysis showed lower levels of mutant SMN proteins compared with wild-type SMN. In mutant SMN proteins, it is noteworthy that the level of the p.Thr274Tyrfs mutant was much reduced compared with that of the p.Trp92Ser mutant. Conclusions SMN mutations may affect the stability and levels of the protein.</description><subject>C-terminal region</subject><subject>Child</subject><subject>Child, Preschool</subject><subject>Female</subject><subject>Gene Expression</subject><subject>HeLa Cells</subject><subject>Humans</subject><subject>Infant</subject><subject>Male</subject><subject>Muscular Atrophy, Spinal - genetics</subject><subject>Mutation</subject><subject>Neurology</subject><subject>Protein Domains</subject><subject>Protein Stability</subject><subject>SMN mutation</subject><subject>SMN stability</subject><subject>Survival of Motor Neuron 1 Protein - genetics</subject><subject>Survival of Motor Neuron 1 Protein - metabolism</subject><subject>Tudor domain</subject><subject>YG box</subject><issn>0387-7604</issn><issn>1872-7131</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU9v1DAQxS0EotvCV6h85JIw9jh2ekFUK_5UauGw5Ww58UR4SZxiJ5XKp8erbXvgwmku782b9xvGzgXUAoR-v6-75EL0dF9LEKYGrAHkC7YRrZGVEShesg1gayqjQZ2w05z3ACCkgNfsRLaodYNqw652N5d8Whe3hDlmHiLf3Xzjt6ufE3fR8221UJpCdCP381QSM_eUF9eFMfwhvvwkfpfmhUJ8w14Nbsz09nGesR-fP91uv1bX379cbS-vq74RuFTUtqTl4BWiVqTN0LVDJ5sOCQ2pTg3S-4a6xuBgxIUC6vBCOemlBN0Yg3jG3h33ltzfa7nFTiH3NI4u0rxmK9oWWwVKNEWqj9I-zTknGuxdCpNLD1aAPWC0e_uE0R4wWkBbMBbj-WPG2k3kn21P3Irg41FApel9oGRzHyj25EOifrF-Dv_P-PDPin4MMfRu_EUPlPfzmgr10sdmacHuDs88_FIYBEAN-BcXqJqm</recordid><startdate>20170801</startdate><enddate>20170801</enddate><creator>Takarada, Toru</creator><creator>Ar Rochmah, Mawaddah</creator><creator>Harahap, Nur Imma Fatimah</creator><creator>Shinohara, Masakazu</creator><creator>Saito, Toshio</creator><creator>Saito, Kayoko</creator><creator>Lai, Poh San</creator><creator>Bouike, Yoshihiro</creator><creator>Takeshima, Yasuhiro</creator><creator>Awano, Hiroyuki</creator><creator>Morioka, Ichiro</creator><creator>Iijima, Kazumoto</creator><creator>Nishio, Hisahide</creator><creator>Takeuchi, Atsuko</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20170801</creationdate><title>SMA mutations in SMN Tudor and C-terminal domains destabilize the protein</title><author>Takarada, Toru ; Ar Rochmah, Mawaddah ; Harahap, Nur Imma Fatimah ; Shinohara, Masakazu ; Saito, Toshio ; Saito, Kayoko ; Lai, Poh San ; Bouike, Yoshihiro ; Takeshima, Yasuhiro ; Awano, Hiroyuki ; Morioka, Ichiro ; Iijima, Kazumoto ; Nishio, Hisahide ; Takeuchi, Atsuko</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c513t-e88e62fd43364e67fb8fb25b3e37e4b4f2dd5eb573f71940eb394a2d220657733</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>C-terminal region</topic><topic>Child</topic><topic>Child, Preschool</topic><topic>Female</topic><topic>Gene Expression</topic><topic>HeLa Cells</topic><topic>Humans</topic><topic>Infant</topic><topic>Male</topic><topic>Muscular Atrophy, Spinal - genetics</topic><topic>Mutation</topic><topic>Neurology</topic><topic>Protein Domains</topic><topic>Protein Stability</topic><topic>SMN mutation</topic><topic>SMN stability</topic><topic>Survival of Motor Neuron 1 Protein - genetics</topic><topic>Survival of Motor Neuron 1 Protein - metabolism</topic><topic>Tudor domain</topic><topic>YG box</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Takarada, Toru</creatorcontrib><creatorcontrib>Ar Rochmah, Mawaddah</creatorcontrib><creatorcontrib>Harahap, Nur Imma Fatimah</creatorcontrib><creatorcontrib>Shinohara, Masakazu</creatorcontrib><creatorcontrib>Saito, Toshio</creatorcontrib><creatorcontrib>Saito, Kayoko</creatorcontrib><creatorcontrib>Lai, Poh San</creatorcontrib><creatorcontrib>Bouike, Yoshihiro</creatorcontrib><creatorcontrib>Takeshima, Yasuhiro</creatorcontrib><creatorcontrib>Awano, Hiroyuki</creatorcontrib><creatorcontrib>Morioka, Ichiro</creatorcontrib><creatorcontrib>Iijima, Kazumoto</creatorcontrib><creatorcontrib>Nishio, Hisahide</creatorcontrib><creatorcontrib>Takeuchi, Atsuko</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Brain & development (Tokyo. 1979)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Takarada, Toru</au><au>Ar Rochmah, Mawaddah</au><au>Harahap, Nur Imma Fatimah</au><au>Shinohara, Masakazu</au><au>Saito, Toshio</au><au>Saito, Kayoko</au><au>Lai, Poh San</au><au>Bouike, Yoshihiro</au><au>Takeshima, Yasuhiro</au><au>Awano, Hiroyuki</au><au>Morioka, Ichiro</au><au>Iijima, Kazumoto</au><au>Nishio, Hisahide</au><au>Takeuchi, Atsuko</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>SMA mutations in SMN Tudor and C-terminal domains destabilize the protein</atitle><jtitle>Brain & development (Tokyo. 1979)</jtitle><addtitle>Brain Dev</addtitle><date>2017-08-01</date><risdate>2017</risdate><volume>39</volume><issue>7</issue><spage>606</spage><epage>612</epage><pages>606-612</pages><issn>0387-7604</issn><eissn>1872-7131</eissn><abstract>Abstract Background and purpose Most spinal muscular atrophy (SMA) patients are homozygous for survival of motor neuron 1 gene ( SMN1 ) deletion. However, some SMA patients carry an intragenic SMN1 mutation. Such patients provide a clue to understanding the function of the SMN protein and the role of each domain of the protein. We previously identified mutations in the Tudor domain and C-terminal region of the SMN protein in three Japanese SMA patients. To clarify the effect of these mutations on protein stability, we conducted expression assays of SMN with mutated domains. Patients and methods Patients A and B carried a mutation in SMN1 exon 3, which encodes a Tudor domain, c.275G>C (p.Trp92Ser). Patient C carried a mutation in SMN1 exon 6, which encodes a YG-box; c.819_820insT (p.Thr274Tyrfs). We constructed plasmid expression vectors containing wild-type and mutant SMN1 cDNAs. After transfection of HeLa cells with the expression plasmids, RNA and protein were isolated and analyzed by reverse-transcription PCR and western blot analysis. Results The abundance of wild-type and mutant SMN1 transcripts in HeLa cells was almost the same. However, western blot analysis showed lower levels of mutant SMN proteins compared with wild-type SMN. In mutant SMN proteins, it is noteworthy that the level of the p.Thr274Tyrfs mutant was much reduced compared with that of the p.Trp92Ser mutant. Conclusions SMN mutations may affect the stability and levels of the protein.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>28366534</pmid><doi>10.1016/j.braindev.2017.03.002</doi><tpages>7</tpages></addata></record> |
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subjects | C-terminal region Child Child, Preschool Female Gene Expression HeLa Cells Humans Infant Male Muscular Atrophy, Spinal - genetics Mutation Neurology Protein Domains Protein Stability SMN mutation SMN stability Survival of Motor Neuron 1 Protein - genetics Survival of Motor Neuron 1 Protein - metabolism Tudor domain YG box |
title | SMA mutations in SMN Tudor and C-terminal domains destabilize the protein |
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