SSR polymorphism of modern cultivars and autochthonous forms of the pear tree from North Caucasus
Genetic similarity and relatedness within the set of pear genotypes including autochthonous Circassian cultivars from North Caucasus, European cultivars, accessions of Pyrus caucasica Fed., and modern Russian cultivars were estimated on the basis of analysis of SSR loci. The level of polymorphism fo...
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| Veröffentlicht in: | Russian journal of genetics 2016-11, Vol.52 (11), p.1149-1156 |
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| container_title | Russian journal of genetics |
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| creator | Suprun, I. I. Tokmakov, S. V. Bandurko, I. A. Ilnitskaya, E. T. |
| description | Genetic similarity and relatedness within the set of pear genotypes including autochthonous Circassian cultivars from North Caucasus, European cultivars, accessions of
Pyrus caucasica
Fed., and modern Russian cultivars were estimated on the basis of analysis of SSR loci. The level of polymorphism for the studied loci varied from 11 to 15 alleles per locus in the set of 29 samples of pears. A higher level of allelic polymorphism of SSR loci was revealed for a set of
P. caucasica
samples in comparison with modern cultivated cultivars: from 9 to 12 alleles for
P. caucasica
and from 6 to 8 alleles for modern cultivars. Specific alleles for the mentioned groups of pears were identified. UPGMA clustering revealed two distinct groups: one includes
P. caucasica
accessions and autochthonous Caucasian cultivars and the other group includes all cultivated European and Russian pear cultivar. The results support the hypothesis of an isolated gene pool formation of autochthonous pear cultivars of the North Caucasus and their probable origin from the wild
P. caucasica
. |
| doi_str_mv | 10.1134/S1022795416100112 |
| format | Article |
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Pyrus caucasica
Fed., and modern Russian cultivars were estimated on the basis of analysis of SSR loci. The level of polymorphism for the studied loci varied from 11 to 15 alleles per locus in the set of 29 samples of pears. A higher level of allelic polymorphism of SSR loci was revealed for a set of
P. caucasica
samples in comparison with modern cultivated cultivars: from 9 to 12 alleles for
P. caucasica
and from 6 to 8 alleles for modern cultivars. Specific alleles for the mentioned groups of pears were identified. UPGMA clustering revealed two distinct groups: one includes
P. caucasica
accessions and autochthonous Caucasian cultivars and the other group includes all cultivated European and Russian pear cultivar. The results support the hypothesis of an isolated gene pool formation of autochthonous pear cultivars of the North Caucasus and their probable origin from the wild
P. caucasica
.</description><identifier>ISSN: 1022-7954</identifier><identifier>EISSN: 1608-3369</identifier><identifier>DOI: 10.1134/S1022795416100112</identifier><language>eng</language><publisher>Moscow: Pleiades Publishing</publisher><subject>Animal Genetics and Genomics ; Biomedical and Life Sciences ; Biomedicine ; Human Genetics ; Microbial Genetics and Genomics ; Plant Genetics ; Pyrus</subject><ispartof>Russian journal of genetics, 2016-11, Vol.52 (11), p.1149-1156</ispartof><rights>Pleiades Publishing, Inc. 2016</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c321t-c257c54370d4d20e3bb48bd6afebf5b3166ef49d9f713c78f20f78813b2484623</citedby><cites>FETCH-LOGICAL-c321t-c257c54370d4d20e3bb48bd6afebf5b3166ef49d9f713c78f20f78813b2484623</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1134/S1022795416100112$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1134/S1022795416100112$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27923,27924,41487,42556,51318</link.rule.ids></links><search><creatorcontrib>Suprun, I. I.</creatorcontrib><creatorcontrib>Tokmakov, S. V.</creatorcontrib><creatorcontrib>Bandurko, I. A.</creatorcontrib><creatorcontrib>Ilnitskaya, E. T.</creatorcontrib><title>SSR polymorphism of modern cultivars and autochthonous forms of the pear tree from North Caucasus</title><title>Russian journal of genetics</title><addtitle>Russ J Genet</addtitle><description>Genetic similarity and relatedness within the set of pear genotypes including autochthonous Circassian cultivars from North Caucasus, European cultivars, accessions of
Pyrus caucasica
Fed., and modern Russian cultivars were estimated on the basis of analysis of SSR loci. The level of polymorphism for the studied loci varied from 11 to 15 alleles per locus in the set of 29 samples of pears. A higher level of allelic polymorphism of SSR loci was revealed for a set of
P. caucasica
samples in comparison with modern cultivated cultivars: from 9 to 12 alleles for
P. caucasica
and from 6 to 8 alleles for modern cultivars. Specific alleles for the mentioned groups of pears were identified. UPGMA clustering revealed two distinct groups: one includes
P. caucasica
accessions and autochthonous Caucasian cultivars and the other group includes all cultivated European and Russian pear cultivar. The results support the hypothesis of an isolated gene pool formation of autochthonous pear cultivars of the North Caucasus and their probable origin from the wild
P. caucasica
.</description><subject>Animal Genetics and Genomics</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Human Genetics</subject><subject>Microbial Genetics and Genomics</subject><subject>Plant Genetics</subject><subject>Pyrus</subject><issn>1022-7954</issn><issn>1608-3369</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNp9kEFLxDAQhYMouK7-AG85eqlmkjRNj7KoKywKrp5Lmia2S9vUJBX235tlvQmeZuB9b5j3ELoGcgvA-N0WCKVFmXMQQAgAPUELEERmjInyNO1Jzg76OboIYZcQQgRbILXdvuHJ9fvB-antwoCdxYNrjB-xnvvYfSsfsBobrObodBtbN7o5YOv8EA5sbA2ejPI4emOw9W7AL87HFq_UrFWYwyU6s6oP5up3LtHH48P7ap1tXp-eV_ebTDMKMdM0L3TOWUEa3lBiWF1zWTdCWVPbvGYghLG8bEpbANOFtJTYQkpgNeWSC8qW6OZ4d_LuazYhVkMXtOl7NZr0cQUJLriUokwoHFHtXQje2Gry3aD8vgJSHeqs_tSZPPToCYkdP42vdm72Y0r0j-kHh2V3Vw</recordid><startdate>20161101</startdate><enddate>20161101</enddate><creator>Suprun, I. I.</creator><creator>Tokmakov, S. V.</creator><creator>Bandurko, I. A.</creator><creator>Ilnitskaya, E. T.</creator><general>Pleiades Publishing</general><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20161101</creationdate><title>SSR polymorphism of modern cultivars and autochthonous forms of the pear tree from North Caucasus</title><author>Suprun, I. I. ; Tokmakov, S. V. ; Bandurko, I. A. ; Ilnitskaya, E. T.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c321t-c257c54370d4d20e3bb48bd6afebf5b3166ef49d9f713c78f20f78813b2484623</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Animal Genetics and Genomics</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Human Genetics</topic><topic>Microbial Genetics and Genomics</topic><topic>Plant Genetics</topic><topic>Pyrus</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Suprun, I. I.</creatorcontrib><creatorcontrib>Tokmakov, S. V.</creatorcontrib><creatorcontrib>Bandurko, I. A.</creatorcontrib><creatorcontrib>Ilnitskaya, E. T.</creatorcontrib><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Russian journal of genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Suprun, I. I.</au><au>Tokmakov, S. V.</au><au>Bandurko, I. A.</au><au>Ilnitskaya, E. T.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>SSR polymorphism of modern cultivars and autochthonous forms of the pear tree from North Caucasus</atitle><jtitle>Russian journal of genetics</jtitle><stitle>Russ J Genet</stitle><date>2016-11-01</date><risdate>2016</risdate><volume>52</volume><issue>11</issue><spage>1149</spage><epage>1156</epage><pages>1149-1156</pages><issn>1022-7954</issn><eissn>1608-3369</eissn><abstract>Genetic similarity and relatedness within the set of pear genotypes including autochthonous Circassian cultivars from North Caucasus, European cultivars, accessions of
Pyrus caucasica
Fed., and modern Russian cultivars were estimated on the basis of analysis of SSR loci. The level of polymorphism for the studied loci varied from 11 to 15 alleles per locus in the set of 29 samples of pears. A higher level of allelic polymorphism of SSR loci was revealed for a set of
P. caucasica
samples in comparison with modern cultivated cultivars: from 9 to 12 alleles for
P. caucasica
and from 6 to 8 alleles for modern cultivars. Specific alleles for the mentioned groups of pears were identified. UPGMA clustering revealed two distinct groups: one includes
P. caucasica
accessions and autochthonous Caucasian cultivars and the other group includes all cultivated European and Russian pear cultivar. The results support the hypothesis of an isolated gene pool formation of autochthonous pear cultivars of the North Caucasus and their probable origin from the wild
P. caucasica
.</abstract><cop>Moscow</cop><pub>Pleiades Publishing</pub><doi>10.1134/S1022795416100112</doi><tpages>8</tpages></addata></record> |
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| subjects | Animal Genetics and Genomics Biomedical and Life Sciences Biomedicine Human Genetics Microbial Genetics and Genomics Plant Genetics Pyrus |
| title | SSR polymorphism of modern cultivars and autochthonous forms of the pear tree from North Caucasus |
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