Efficient Blood Flow Visualization using Flowline Extraction and Opacity Modulation based on Vascular Structure Analysis
Abstract With the recent advances regarding the acquisition and simulation of blood flow data, blood flow visualization has been widely used in medical imaging for the diagnosis and treatment of pathological vessels. In this paper, we present a novel method for the visualization of the blood flow in...
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Veröffentlicht in: | Computers in biology and medicine 2017-03, Vol.82, p.87-99 |
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description | Abstract With the recent advances regarding the acquisition and simulation of blood flow data, blood flow visualization has been widely used in medical imaging for the diagnosis and treatment of pathological vessels. In this paper, we present a novel method for the visualization of the blood flow in vascular structures. The vessel inlet or outlet is first identified using the orthogonality metric between the normal vectors of the flow velocity and vessel surface. Then, seed points are generated on the identified inlet or outlet by Poisson disk sampling. Therefore, it is possible to achieve the automatic seeding that leads to a consistent and faster flow depiction by skipping the manual location of a seeding plane for the initiation of the line integration. In addition, the early terminated line integration in the thin curved vessels is resolved through the adaptive application of the tracing direction that is based on the flow direction at each seed point. Based on the observation that blood flow usually follows the vessel track, the representative flowline for each branch is defined by the vessel centerline. Then, the flowlines are rendered through an opacity assignment according to the similarity between their shape and the vessel centerline. Therefore, the flowlines that are similar to the vessel centerline are shown transparently, while the different ones are shown opaquely. Accordingly, the opacity modulation method enables the flowlines with an unusual flow pattern to appear more noticeable, while the visual clutter and line occlusion are minimized. Finally, Hue-Saturation-Value color coding is employed for the simultaneous exhibition of flow attributes such as local speed and residence time. The experiment results show that the proposed technique is suitable for the depiction of the blood flow in vascular structures. The proposed approach is applicable to any kinds of tubular structures with embedded flow information. |
doi_str_mv | 10.1016/j.compbiomed.2017.01.020 |
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In this paper, we present a novel method for the visualization of the blood flow in vascular structures. The vessel inlet or outlet is first identified using the orthogonality metric between the normal vectors of the flow velocity and vessel surface. Then, seed points are generated on the identified inlet or outlet by Poisson disk sampling. Therefore, it is possible to achieve the automatic seeding that leads to a consistent and faster flow depiction by skipping the manual location of a seeding plane for the initiation of the line integration. In addition, the early terminated line integration in the thin curved vessels is resolved through the adaptive application of the tracing direction that is based on the flow direction at each seed point. Based on the observation that blood flow usually follows the vessel track, the representative flowline for each branch is defined by the vessel centerline. Then, the flowlines are rendered through an opacity assignment according to the similarity between their shape and the vessel centerline. Therefore, the flowlines that are similar to the vessel centerline are shown transparently, while the different ones are shown opaquely. Accordingly, the opacity modulation method enables the flowlines with an unusual flow pattern to appear more noticeable, while the visual clutter and line occlusion are minimized. Finally, Hue-Saturation-Value color coding is employed for the simultaneous exhibition of flow attributes such as local speed and residence time. The experiment results show that the proposed technique is suitable for the depiction of the blood flow in vascular structures. The proposed approach is applicable to any kinds of tubular structures with embedded flow information.</description><identifier>ISSN: 0010-4825</identifier><identifier>EISSN: 1879-0534</identifier><identifier>DOI: 10.1016/j.compbiomed.2017.01.020</identifier><identifier>PMID: 28167407</identifier><identifier>CODEN: CBMDAW</identifier><language>eng</language><publisher>United States: Elsevier Ltd</publisher><subject>Animals ; Automatic seeding ; Blood Flow Velocity - physiology ; Blood flow visualization ; Blood Vessels - physiology ; Computer Graphics ; Coronary vessels ; Flow velocity ; Flowline extraction ; Humans ; Integration based flow visualization ; Internal Medicine ; Methods ; Models, Cardiovascular ; Opacity modulation ; Other ; Rheology - methods ; User-Computer Interface ; Vascular structure ; Visualization</subject><ispartof>Computers in biology and medicine, 2017-03, Vol.82, p.87-99</ispartof><rights>2017 Elsevier Ltd</rights><rights>Copyright © 2017 Elsevier Ltd. All rights reserved.</rights><rights>Copyright Elsevier Limited Mar 01, 2017</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c435t-eb0ce4173c5f8a4a97ec4d83a75be6ef5c5da716eebc997f0ac6855c032642cb3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0010482517300252$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28167407$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kwon, Ohjae</creatorcontrib><creatorcontrib>Lee, Jeongjin</creatorcontrib><creatorcontrib>Kim, Bohyoung</creatorcontrib><creatorcontrib>Shin, Juneseuk</creatorcontrib><creatorcontrib>Shin, Yeong-Gil</creatorcontrib><title>Efficient Blood Flow Visualization using Flowline Extraction and Opacity Modulation based on Vascular Structure Analysis</title><title>Computers in biology and medicine</title><addtitle>Comput Biol Med</addtitle><description>Abstract With the recent advances regarding the acquisition and simulation of blood flow data, blood flow visualization has been widely used in medical imaging for the diagnosis and treatment of pathological vessels. In this paper, we present a novel method for the visualization of the blood flow in vascular structures. The vessel inlet or outlet is first identified using the orthogonality metric between the normal vectors of the flow velocity and vessel surface. Then, seed points are generated on the identified inlet or outlet by Poisson disk sampling. Therefore, it is possible to achieve the automatic seeding that leads to a consistent and faster flow depiction by skipping the manual location of a seeding plane for the initiation of the line integration. In addition, the early terminated line integration in the thin curved vessels is resolved through the adaptive application of the tracing direction that is based on the flow direction at each seed point. Based on the observation that blood flow usually follows the vessel track, the representative flowline for each branch is defined by the vessel centerline. Then, the flowlines are rendered through an opacity assignment according to the similarity between their shape and the vessel centerline. Therefore, the flowlines that are similar to the vessel centerline are shown transparently, while the different ones are shown opaquely. Accordingly, the opacity modulation method enables the flowlines with an unusual flow pattern to appear more noticeable, while the visual clutter and line occlusion are minimized. Finally, Hue-Saturation-Value color coding is employed for the simultaneous exhibition of flow attributes such as local speed and residence time. The experiment results show that the proposed technique is suitable for the depiction of the blood flow in vascular structures. The proposed approach is applicable to any kinds of tubular structures with embedded flow information.</description><subject>Animals</subject><subject>Automatic seeding</subject><subject>Blood Flow Velocity - physiology</subject><subject>Blood flow visualization</subject><subject>Blood Vessels - physiology</subject><subject>Computer Graphics</subject><subject>Coronary vessels</subject><subject>Flow velocity</subject><subject>Flowline extraction</subject><subject>Humans</subject><subject>Integration based flow visualization</subject><subject>Internal Medicine</subject><subject>Methods</subject><subject>Models, Cardiovascular</subject><subject>Opacity modulation</subject><subject>Other</subject><subject>Rheology - methods</subject><subject>User-Computer Interface</subject><subject>Vascular structure</subject><subject>Visualization</subject><issn>0010-4825</issn><issn>1879-0534</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>BENPR</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNqNksFu1DAQQCMEotvCLyBLXLhkGTtx7FyQ2mpLkYp6KPRqOZMJ8pKNFzspXb4eZ7dVpZ56suV5M6OZ5yxjHJYcePV5vUS_2TbOb6hdCuBqCXwJAl5lC65VnYMsytfZAoBDXmohj7LjGNcAUEIBb7MjoXmlSlCL7H7VdQ4dDSM7671v2UXv_7JbFyfbu392dH5gU3TDr32gdwOx1f0YLO4jdmjZ9daiG3fsu2-n_pDQ2EgtS5dbGzE9BnYzhgnHKRA7HWy_iy6-y950to_0_uE8yX5erH6cX-ZX11-_nZ9e5VgWcsypAaSSqwJlp21pa0VYtrqwSjZUUSdRtlbxiqjBulYdWKy0lAiFqEqBTXGSfTrU3Qb_Z6I4mo2LSH1vB_JTNGlfShdK1fwFaCW1ECWvE_rxGbr2U0ij7QsKWWmlVaL0gcLgYwzUmW1wGxt2hoOZRZq1eRJpZpEGuEkiU-qHhwZTM8ceEx_NJeDsAFBa3p2jYOKsEal1gXA0rXcv6fLlWRFMih3a_jftKD7NZKIwYG7mDzX_p-QDQEhR_Af9P8p3</recordid><startdate>20170301</startdate><enddate>20170301</enddate><creator>Kwon, Ohjae</creator><creator>Lee, Jeongjin</creator><creator>Kim, Bohyoung</creator><creator>Shin, Juneseuk</creator><creator>Shin, Yeong-Gil</creator><general>Elsevier Ltd</general><general>Elsevier Limited</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7RV</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AL</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>HCIFZ</scope><scope>JQ2</scope><scope>K7-</scope><scope>K9.</scope><scope>KB0</scope><scope>LK8</scope><scope>M0N</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7P</scope><scope>M7Z</scope><scope>MBDVC</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>7X8</scope><scope>7QO</scope></search><sort><creationdate>20170301</creationdate><title>Efficient Blood Flow Visualization using Flowline Extraction and Opacity Modulation based on Vascular Structure Analysis</title><author>Kwon, Ohjae ; Lee, Jeongjin ; Kim, Bohyoung ; Shin, Juneseuk ; Shin, Yeong-Gil</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c435t-eb0ce4173c5f8a4a97ec4d83a75be6ef5c5da716eebc997f0ac6855c032642cb3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Animals</topic><topic>Automatic seeding</topic><topic>Blood Flow Velocity - 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Academic</collection><collection>Biotechnology Research Abstracts</collection><jtitle>Computers in biology and medicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kwon, Ohjae</au><au>Lee, Jeongjin</au><au>Kim, Bohyoung</au><au>Shin, Juneseuk</au><au>Shin, Yeong-Gil</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Efficient Blood Flow Visualization using Flowline Extraction and Opacity Modulation based on Vascular Structure Analysis</atitle><jtitle>Computers in biology and medicine</jtitle><addtitle>Comput Biol Med</addtitle><date>2017-03-01</date><risdate>2017</risdate><volume>82</volume><spage>87</spage><epage>99</epage><pages>87-99</pages><issn>0010-4825</issn><eissn>1879-0534</eissn><coden>CBMDAW</coden><abstract>Abstract With the recent advances regarding the acquisition and simulation of blood flow data, blood flow visualization has been widely used in medical imaging for the diagnosis and treatment of pathological vessels. In this paper, we present a novel method for the visualization of the blood flow in vascular structures. The vessel inlet or outlet is first identified using the orthogonality metric between the normal vectors of the flow velocity and vessel surface. Then, seed points are generated on the identified inlet or outlet by Poisson disk sampling. Therefore, it is possible to achieve the automatic seeding that leads to a consistent and faster flow depiction by skipping the manual location of a seeding plane for the initiation of the line integration. In addition, the early terminated line integration in the thin curved vessels is resolved through the adaptive application of the tracing direction that is based on the flow direction at each seed point. Based on the observation that blood flow usually follows the vessel track, the representative flowline for each branch is defined by the vessel centerline. Then, the flowlines are rendered through an opacity assignment according to the similarity between their shape and the vessel centerline. Therefore, the flowlines that are similar to the vessel centerline are shown transparently, while the different ones are shown opaquely. Accordingly, the opacity modulation method enables the flowlines with an unusual flow pattern to appear more noticeable, while the visual clutter and line occlusion are minimized. Finally, Hue-Saturation-Value color coding is employed for the simultaneous exhibition of flow attributes such as local speed and residence time. The experiment results show that the proposed technique is suitable for the depiction of the blood flow in vascular structures. The proposed approach is applicable to any kinds of tubular structures with embedded flow information.</abstract><cop>United States</cop><pub>Elsevier Ltd</pub><pmid>28167407</pmid><doi>10.1016/j.compbiomed.2017.01.020</doi><tpages>13</tpages></addata></record> |
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subjects | Animals Automatic seeding Blood Flow Velocity - physiology Blood flow visualization Blood Vessels - physiology Computer Graphics Coronary vessels Flow velocity Flowline extraction Humans Integration based flow visualization Internal Medicine Methods Models, Cardiovascular Opacity modulation Other Rheology - methods User-Computer Interface Vascular structure Visualization |
title | Efficient Blood Flow Visualization using Flowline Extraction and Opacity Modulation based on Vascular Structure Analysis |
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