Pre-cancer Risk Assessment in Habitual Smokers from DIC Images of Oral Exfoliative Cells using Active Contour and SVM Analysis
Abstract Habitual smokers are known to be at higher risk for developing oral cancer, which is increasing at an alarming rate globally. Conventionally, oral cancer is associated with high mortality rates, although recent reports show the improved survival outcomes by early diagnosis of disease. An ef...
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Veröffentlicht in: | Tissue & cell 2017-04, Vol.49 (2), p.296-306 |
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description | Abstract Habitual smokers are known to be at higher risk for developing oral cancer, which is increasing at an alarming rate globally. Conventionally, oral cancer is associated with high mortality rates, although recent reports show the improved survival outcomes by early diagnosis of disease. An effective prediction system which will enable to identify the probability of cancer development amongst the habitual smokers, is thus expected to benefit sizable number of populations. Present work describes a non-invasive, integrated method for early detection of cellular abnormalities based on analysis of different cyto-morphological features of exfoliative oral epithelial cells. Differential Interference Contrast (DIC) microscopy provides a potential optical tool as this mode provides a pseudo three dimensional (3-D) image with detailed morphological and textural features obtained from noninvasive, label free epithelial cells. For segmentation of DIC images, gradient vector flow snake model active contour process has been adopted. To evaluate cellular abnormalities amongst habitual smokers, the selected morphological and textural features of epithelial cells are compared with the non-smoker (−ve control group) group and clinically diagnosed pre-cancer patients (+ve control group) using support vector machine (SVM) classifier. Accuracy of the developed SVM based classification has been found to be 86 % with 80 % sensitivity and 89 % specificity in classifying the features from the volunteers having smoking habit. |
doi_str_mv | 10.1016/j.tice.2017.01.009 |
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Conventionally, oral cancer is associated with high mortality rates, although recent reports show the improved survival outcomes by early diagnosis of disease. An effective prediction system which will enable to identify the probability of cancer development amongst the habitual smokers, is thus expected to benefit sizable number of populations. Present work describes a non-invasive, integrated method for early detection of cellular abnormalities based on analysis of different cyto-morphological features of exfoliative oral epithelial cells. Differential Interference Contrast (DIC) microscopy provides a potential optical tool as this mode provides a pseudo three dimensional (3-D) image with detailed morphological and textural features obtained from noninvasive, label free epithelial cells. For segmentation of DIC images, gradient vector flow snake model active contour process has been adopted. To evaluate cellular abnormalities amongst habitual smokers, the selected morphological and textural features of epithelial cells are compared with the non-smoker (−ve control group) group and clinically diagnosed pre-cancer patients (+ve control group) using support vector machine (SVM) classifier. Accuracy of the developed SVM based classification has been found to be 86 % with 80 % sensitivity and 89 % specificity in classifying the features from the volunteers having smoking habit.</description><identifier>ISSN: 0040-8166</identifier><identifier>EISSN: 1532-3072</identifier><identifier>DOI: 10.1016/j.tice.2017.01.009</identifier><identifier>PMID: 28222889</identifier><language>eng</language><publisher>Scotland: Elsevier Ltd</publisher><subject>Abnormalities ; Advanced Basic Science ; Cancer ; Cellular biology ; Classification ; Contours ; DIC image ; Early Detection of Cancer ; Epithelial cells ; Epithelial Cells - pathology ; Epithelial Cells - ultrastructure ; Exfoliative cytology ; Female ; Health risks ; Humans ; Image processing ; Image Processing, Computer-Assisted ; Image segmentation ; Male ; Medical diagnosis ; Medical imaging ; Microscopy ; Microscopy, Interference ; Mouth Mucosa - pathology ; Mouth Mucosa - ultrastructure ; Mouth Neoplasms - diagnosis ; Mouth Neoplasms - pathology ; Non-invasive detection ; Oral cancer ; Risk assessment ; Risk factors ; Shape ; Smoking ; Smoking - adverse effects ; Support Vector Machine ; Support vector machines ; SVM classifier ; Tomography</subject><ispartof>Tissue & cell, 2017-04, Vol.49 (2), p.296-306</ispartof><rights>Elsevier Ltd</rights><rights>2017 Elsevier Ltd</rights><rights>Copyright © 2017 Elsevier Ltd. All rights reserved.</rights><rights>Copyright Elsevier Science Ltd. Apr 2017</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c505t-b95de04510602dfb0c629e978a009fdeec94b20bfbdad3326a396ddaf2e662e3</citedby><cites>FETCH-LOGICAL-c505t-b95de04510602dfb0c629e978a009fdeec94b20bfbdad3326a396ddaf2e662e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0040816616301884$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3536,27903,27904,65309</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28222889$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Dey, Susmita</creatorcontrib><creatorcontrib>Sarkar, Ripon</creatorcontrib><creatorcontrib>Chatterjee, Kabita</creatorcontrib><creatorcontrib>Datta, Pallab</creatorcontrib><creatorcontrib>Barui, Ananya</creatorcontrib><creatorcontrib>Maity, Santi P</creatorcontrib><title>Pre-cancer Risk Assessment in Habitual Smokers from DIC Images of Oral Exfoliative Cells using Active Contour and SVM Analysis</title><title>Tissue & cell</title><addtitle>Tissue Cell</addtitle><description>Abstract Habitual smokers are known to be at higher risk for developing oral cancer, which is increasing at an alarming rate globally. Conventionally, oral cancer is associated with high mortality rates, although recent reports show the improved survival outcomes by early diagnosis of disease. An effective prediction system which will enable to identify the probability of cancer development amongst the habitual smokers, is thus expected to benefit sizable number of populations. Present work describes a non-invasive, integrated method for early detection of cellular abnormalities based on analysis of different cyto-morphological features of exfoliative oral epithelial cells. Differential Interference Contrast (DIC) microscopy provides a potential optical tool as this mode provides a pseudo three dimensional (3-D) image with detailed morphological and textural features obtained from noninvasive, label free epithelial cells. For segmentation of DIC images, gradient vector flow snake model active contour process has been adopted. To evaluate cellular abnormalities amongst habitual smokers, the selected morphological and textural features of epithelial cells are compared with the non-smoker (−ve control group) group and clinically diagnosed pre-cancer patients (+ve control group) using support vector machine (SVM) classifier. Accuracy of the developed SVM based classification has been found to be 86 % with 80 % sensitivity and 89 % specificity in classifying the features from the volunteers having smoking habit.</description><subject>Abnormalities</subject><subject>Advanced Basic Science</subject><subject>Cancer</subject><subject>Cellular biology</subject><subject>Classification</subject><subject>Contours</subject><subject>DIC image</subject><subject>Early Detection of Cancer</subject><subject>Epithelial cells</subject><subject>Epithelial Cells - pathology</subject><subject>Epithelial Cells - ultrastructure</subject><subject>Exfoliative cytology</subject><subject>Female</subject><subject>Health risks</subject><subject>Humans</subject><subject>Image processing</subject><subject>Image Processing, Computer-Assisted</subject><subject>Image segmentation</subject><subject>Male</subject><subject>Medical diagnosis</subject><subject>Medical imaging</subject><subject>Microscopy</subject><subject>Microscopy, Interference</subject><subject>Mouth Mucosa - pathology</subject><subject>Mouth Mucosa - ultrastructure</subject><subject>Mouth Neoplasms - diagnosis</subject><subject>Mouth Neoplasms - pathology</subject><subject>Non-invasive detection</subject><subject>Oral cancer</subject><subject>Risk assessment</subject><subject>Risk factors</subject><subject>Shape</subject><subject>Smoking</subject><subject>Smoking - adverse effects</subject><subject>Support Vector Machine</subject><subject>Support vector machines</subject><subject>SVM classifier</subject><subject>Tomography</subject><issn>0040-8166</issn><issn>1532-3072</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kk9r3DAQxU1pabZpv0APRdBLL3ZHsleWoRSWbdospKR0Q69ClsZBu_6TaOzQveSzR2bTHHLoSTD6zePNvEmS9xwyDlx-3mWjt5gJ4GUGPAOoXiQLvsxFmkMpXiYLgAJSxaU8Sd4Q7QCgLHj5OjkRSgihVLVI7n8FTK3pLQb229OerYiQqMN-ZL5n56b242Ratu2GPQZiTRg69m2zZpvOXCOxoWGXIf6f_W2G1pvR3yFbY9sSm8j312xlj6WhH4cpMNM7tv3zk6160x7I09vkVWNawneP72ly9f3san2eXlz-2KxXF6ldwnJM62rpEIolBwnCNTVYKSqsSmXi0I1DtFVRC6ib2hmX50KavJLOmUaglALz0-TTUfYmDLcT0qg7TzbaND0OE2muSqiUjCuJ6Mdn6C4aj3ZJC1BVKSqR55ESR8qGgShgo2-C70w4aA56Dkfv9ByOnsPRwHX0GZs-PEpPdYfuqeVfGhH4cgQwruLOY9BkPcZsnA9oR-0G_3_9r8_abet7b027xwPS0xxck9Cgt_N5zNfBZQ5cqSJ_AOiNtO4</recordid><startdate>20170401</startdate><enddate>20170401</enddate><creator>Dey, Susmita</creator><creator>Sarkar, Ripon</creator><creator>Chatterjee, Kabita</creator><creator>Datta, Pallab</creator><creator>Barui, Ananya</creator><creator>Maity, Santi P</creator><general>Elsevier Ltd</general><general>Elsevier Science Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7TM</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20170401</creationdate><title>Pre-cancer Risk Assessment in Habitual Smokers from DIC Images of Oral Exfoliative Cells using Active Contour and SVM Analysis</title><author>Dey, Susmita ; Sarkar, Ripon ; Chatterjee, Kabita ; Datta, Pallab ; Barui, Ananya ; Maity, Santi P</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c505t-b95de04510602dfb0c629e978a009fdeec94b20bfbdad3326a396ddaf2e662e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Abnormalities</topic><topic>Advanced Basic Science</topic><topic>Cancer</topic><topic>Cellular biology</topic><topic>Classification</topic><topic>Contours</topic><topic>DIC image</topic><topic>Early Detection of Cancer</topic><topic>Epithelial cells</topic><topic>Epithelial Cells - pathology</topic><topic>Epithelial Cells - ultrastructure</topic><topic>Exfoliative cytology</topic><topic>Female</topic><topic>Health risks</topic><topic>Humans</topic><topic>Image processing</topic><topic>Image Processing, Computer-Assisted</topic><topic>Image segmentation</topic><topic>Male</topic><topic>Medical diagnosis</topic><topic>Medical imaging</topic><topic>Microscopy</topic><topic>Microscopy, Interference</topic><topic>Mouth Mucosa - pathology</topic><topic>Mouth Mucosa - ultrastructure</topic><topic>Mouth Neoplasms - diagnosis</topic><topic>Mouth Neoplasms - pathology</topic><topic>Non-invasive detection</topic><topic>Oral cancer</topic><topic>Risk assessment</topic><topic>Risk factors</topic><topic>Shape</topic><topic>Smoking</topic><topic>Smoking - adverse effects</topic><topic>Support Vector Machine</topic><topic>Support vector machines</topic><topic>SVM classifier</topic><topic>Tomography</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Dey, Susmita</creatorcontrib><creatorcontrib>Sarkar, Ripon</creatorcontrib><creatorcontrib>Chatterjee, Kabita</creatorcontrib><creatorcontrib>Datta, Pallab</creatorcontrib><creatorcontrib>Barui, Ananya</creatorcontrib><creatorcontrib>Maity, Santi P</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Tissue & cell</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Dey, Susmita</au><au>Sarkar, Ripon</au><au>Chatterjee, Kabita</au><au>Datta, Pallab</au><au>Barui, Ananya</au><au>Maity, Santi P</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Pre-cancer Risk Assessment in Habitual Smokers from DIC Images of Oral Exfoliative Cells using Active Contour and SVM Analysis</atitle><jtitle>Tissue & cell</jtitle><addtitle>Tissue Cell</addtitle><date>2017-04-01</date><risdate>2017</risdate><volume>49</volume><issue>2</issue><spage>296</spage><epage>306</epage><pages>296-306</pages><issn>0040-8166</issn><eissn>1532-3072</eissn><abstract>Abstract Habitual smokers are known to be at higher risk for developing oral cancer, which is increasing at an alarming rate globally. Conventionally, oral cancer is associated with high mortality rates, although recent reports show the improved survival outcomes by early diagnosis of disease. An effective prediction system which will enable to identify the probability of cancer development amongst the habitual smokers, is thus expected to benefit sizable number of populations. Present work describes a non-invasive, integrated method for early detection of cellular abnormalities based on analysis of different cyto-morphological features of exfoliative oral epithelial cells. Differential Interference Contrast (DIC) microscopy provides a potential optical tool as this mode provides a pseudo three dimensional (3-D) image with detailed morphological and textural features obtained from noninvasive, label free epithelial cells. For segmentation of DIC images, gradient vector flow snake model active contour process has been adopted. To evaluate cellular abnormalities amongst habitual smokers, the selected morphological and textural features of epithelial cells are compared with the non-smoker (−ve control group) group and clinically diagnosed pre-cancer patients (+ve control group) using support vector machine (SVM) classifier. Accuracy of the developed SVM based classification has been found to be 86 % with 80 % sensitivity and 89 % specificity in classifying the features from the volunteers having smoking habit.</abstract><cop>Scotland</cop><pub>Elsevier Ltd</pub><pmid>28222889</pmid><doi>10.1016/j.tice.2017.01.009</doi><tpages>11</tpages></addata></record> |
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subjects | Abnormalities Advanced Basic Science Cancer Cellular biology Classification Contours DIC image Early Detection of Cancer Epithelial cells Epithelial Cells - pathology Epithelial Cells - ultrastructure Exfoliative cytology Female Health risks Humans Image processing Image Processing, Computer-Assisted Image segmentation Male Medical diagnosis Medical imaging Microscopy Microscopy, Interference Mouth Mucosa - pathology Mouth Mucosa - ultrastructure Mouth Neoplasms - diagnosis Mouth Neoplasms - pathology Non-invasive detection Oral cancer Risk assessment Risk factors Shape Smoking Smoking - adverse effects Support Vector Machine Support vector machines SVM classifier Tomography |
title | Pre-cancer Risk Assessment in Habitual Smokers from DIC Images of Oral Exfoliative Cells using Active Contour and SVM Analysis |
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