Improved method for effective screening of ACC (1-aminocyclopropane-1-carboxylate) deaminase producing microorganisms
Aminocyclopropane-1-carboxylate deaminase (ACCD) producing microorganisms support plant growth under a variety of biotic and abiotic stress conditions such as drought, soil salinity, flooding, heavy metal pollution and phyto-pathogen attack. Available screening methods for ACCD give idea only about...
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Veröffentlicht in: | Journal of microbiological methods 2016-12, Vol.131, p.102-104 |
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description | Aminocyclopropane-1-carboxylate deaminase (ACCD) producing microorganisms support plant growth under a variety of biotic and abiotic stress conditions such as drought, soil salinity, flooding, heavy metal pollution and phyto-pathogen attack. Available screening methods for ACCD give idea only about its primary microbial ACCD activity than the actual potential. In the present investigation, we have simply improved screening method by incorporating pH indicator dyes (phenol red and bromothymol blue) in ACC containing medium. This modification is based on the basic principle that ACCD action releases ammonia which can be detected by color change and zone around the bacterial colony. High color intensity and zone around the colony indicates most potent producer, colony showing only a color change indicates moderate potential and no change in colony color indicates least efficiency. Enzymatic bioassays as well as root elongation studies revealed that ACC-deaminase activity of Pseudomonas aeruginosa, Stenotrophomonas maltophilia and Bacillus subtilis clearly corresponds to their growth on dye incorporated ACC medium. This method could be used to complement the existing screening methods and to speed up the targeted isolation of agriculturally important microorganisms.
[Display omitted]
•Effectively screens ACCD producing microorganisms by incorporating pH indicator dye in ACC deaminase Agar medium•Methods give the visible ACCD production potential on the basis of color change around colonies.•Quantitative, ACC deaminase production by spectrophotometric method are in accordance with plate assay results.•Plant root elongation assays also suggested efficacy of plate based screening method. |
doi_str_mv | 10.1016/j.mimet.2016.10.009 |
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[Display omitted]
•Effectively screens ACCD producing microorganisms by incorporating pH indicator dye in ACC deaminase Agar medium•Methods give the visible ACCD production potential on the basis of color change around colonies.•Quantitative, ACC deaminase production by spectrophotometric method are in accordance with plate assay results.•Plant root elongation assays also suggested efficacy of plate based screening method.</description><identifier>ISSN: 0167-7012</identifier><identifier>EISSN: 1872-8359</identifier><identifier>DOI: 10.1016/j.mimet.2016.10.009</identifier><identifier>PMID: 27769905</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>ACC deaminase ; Agriculture ; Arachis - growth & development ; Arachis - microbiology ; Bacillus subtilis ; Bacteria - classification ; Bacteria - enzymology ; Bacteria - isolation & purification ; Biological Assay ; Bromthymol Blue ; Carbon-Carbon Lyases - analysis ; Carbon-Carbon Lyases - metabolism ; Carbon-Carbon Lyases - pharmacology ; Colony Count, Microbial - methods ; Color ; Environmental Monitoring - methods ; Environmental Pollution ; Enzyme Assays ; Hydrogen-Ion Concentration ; India ; Lycopersicon esculentum - growth & development ; Lycopersicon esculentum - microbiology ; Mass Screening - methods ; PGPR ; pH dye ; Phenol red ; Phenolsulfonphthalein ; Plant Development - drug effects ; Plant Roots - growth & development ; Plant Roots - microbiology ; Pseudomonas aeruginosa ; Rhizosphere ; Screening ; Soil ; Soil Microbiology ; Stenotrophomonas maltophilia ; Stress, Physiological ; Triticum - growth & development ; Triticum - microbiology</subject><ispartof>Journal of microbiological methods, 2016-12, Vol.131, p.102-104</ispartof><rights>2016 Elsevier B.V.</rights><rights>Copyright © 2016 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c392t-a5c96e2500c15dee2aa128e3e1239fc75faa4583231d2d3b56533fa4b671acb83</citedby><cites>FETCH-LOGICAL-c392t-a5c96e2500c15dee2aa128e3e1239fc75faa4583231d2d3b56533fa4b671acb83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.mimet.2016.10.009$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,778,782,3539,27907,27908,45978</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27769905$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Patil, Chandrashekhar</creatorcontrib><creatorcontrib>Suryawanshi, Rahul</creatorcontrib><creatorcontrib>Koli, Sunil</creatorcontrib><creatorcontrib>Patil, Satish</creatorcontrib><title>Improved method for effective screening of ACC (1-aminocyclopropane-1-carboxylate) deaminase producing microorganisms</title><title>Journal of microbiological methods</title><addtitle>J Microbiol Methods</addtitle><description>Aminocyclopropane-1-carboxylate deaminase (ACCD) producing microorganisms support plant growth under a variety of biotic and abiotic stress conditions such as drought, soil salinity, flooding, heavy metal pollution and phyto-pathogen attack. Available screening methods for ACCD give idea only about its primary microbial ACCD activity than the actual potential. In the present investigation, we have simply improved screening method by incorporating pH indicator dyes (phenol red and bromothymol blue) in ACC containing medium. This modification is based on the basic principle that ACCD action releases ammonia which can be detected by color change and zone around the bacterial colony. High color intensity and zone around the colony indicates most potent producer, colony showing only a color change indicates moderate potential and no change in colony color indicates least efficiency. Enzymatic bioassays as well as root elongation studies revealed that ACC-deaminase activity of Pseudomonas aeruginosa, Stenotrophomonas maltophilia and Bacillus subtilis clearly corresponds to their growth on dye incorporated ACC medium. This method could be used to complement the existing screening methods and to speed up the targeted isolation of agriculturally important microorganisms.
[Display omitted]
•Effectively screens ACCD producing microorganisms by incorporating pH indicator dye in ACC deaminase Agar medium•Methods give the visible ACCD production potential on the basis of color change around colonies.•Quantitative, ACC deaminase production by spectrophotometric method are in accordance with plate assay results.•Plant root elongation assays also suggested efficacy of plate based screening method.</description><subject>ACC deaminase</subject><subject>Agriculture</subject><subject>Arachis - growth & development</subject><subject>Arachis - microbiology</subject><subject>Bacillus subtilis</subject><subject>Bacteria - classification</subject><subject>Bacteria - enzymology</subject><subject>Bacteria - isolation & purification</subject><subject>Biological Assay</subject><subject>Bromthymol Blue</subject><subject>Carbon-Carbon Lyases - analysis</subject><subject>Carbon-Carbon Lyases - metabolism</subject><subject>Carbon-Carbon Lyases - pharmacology</subject><subject>Colony Count, Microbial - methods</subject><subject>Color</subject><subject>Environmental Monitoring - methods</subject><subject>Environmental Pollution</subject><subject>Enzyme Assays</subject><subject>Hydrogen-Ion Concentration</subject><subject>India</subject><subject>Lycopersicon esculentum - growth & development</subject><subject>Lycopersicon esculentum - microbiology</subject><subject>Mass Screening - methods</subject><subject>PGPR</subject><subject>pH dye</subject><subject>Phenol red</subject><subject>Phenolsulfonphthalein</subject><subject>Plant Development - drug effects</subject><subject>Plant Roots - growth & development</subject><subject>Plant Roots - microbiology</subject><subject>Pseudomonas aeruginosa</subject><subject>Rhizosphere</subject><subject>Screening</subject><subject>Soil</subject><subject>Soil Microbiology</subject><subject>Stenotrophomonas maltophilia</subject><subject>Stress, Physiological</subject><subject>Triticum - growth & development</subject><subject>Triticum - microbiology</subject><issn>0167-7012</issn><issn>1872-8359</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkU1vGyEQhlHVqnHS_oJKFcf0sC4DZj8OPURW8yFF6iU5IxaGFGtZXNi14n9fNk57rHpCzDzvvAMvIZ-ArYFB_XW3Dj7gtOblUiprxro3ZAVtw6tWyO4tWZVGUzUM-Bk5z3nHGEixad-TM940ddcxuSLzXdineEBLy6if0VIXE0Xn0Ez-gDSbhDj68YlGR6-2W3oJlQ5-jOZohliUez1iBZXRqY_Px0FP-IVaXBCdkRbAzmaRB29SjOlJjz6H_IG8c3rI-PH1vCCP198ftrfV_Y-bu-3VfWVEx6dKS9PVyCVjBqRF5FoDb1EgcNE500in9Ua2gguw3Ipe1lIIpzd93YA2fSsuyOVpblnk14x5UsFng8NQto5zVtDWrRANsO4_UCElFJQVVJzQ8qScEzq1Tz7odFTA1BKN2qmXaNQSzVJkLwafXw3mPqD9q_mTRQG-nQAsP3LwmFQ2HkeD1qcSh7LR_9PgN2XMocw</recordid><startdate>201612</startdate><enddate>201612</enddate><creator>Patil, Chandrashekhar</creator><creator>Suryawanshi, Rahul</creator><creator>Koli, Sunil</creator><creator>Patil, Satish</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7T7</scope><scope>7TV</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope></search><sort><creationdate>201612</creationdate><title>Improved method for effective screening of ACC (1-aminocyclopropane-1-carboxylate) deaminase producing microorganisms</title><author>Patil, Chandrashekhar ; Suryawanshi, Rahul ; Koli, Sunil ; Patil, Satish</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c392t-a5c96e2500c15dee2aa128e3e1239fc75faa4583231d2d3b56533fa4b671acb83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>ACC deaminase</topic><topic>Agriculture</topic><topic>Arachis - growth & development</topic><topic>Arachis - microbiology</topic><topic>Bacillus subtilis</topic><topic>Bacteria - classification</topic><topic>Bacteria - enzymology</topic><topic>Bacteria - isolation & purification</topic><topic>Biological Assay</topic><topic>Bromthymol Blue</topic><topic>Carbon-Carbon Lyases - analysis</topic><topic>Carbon-Carbon Lyases - metabolism</topic><topic>Carbon-Carbon Lyases - pharmacology</topic><topic>Colony Count, Microbial - methods</topic><topic>Color</topic><topic>Environmental Monitoring - methods</topic><topic>Environmental Pollution</topic><topic>Enzyme Assays</topic><topic>Hydrogen-Ion Concentration</topic><topic>India</topic><topic>Lycopersicon esculentum - growth & development</topic><topic>Lycopersicon esculentum - microbiology</topic><topic>Mass Screening - methods</topic><topic>PGPR</topic><topic>pH dye</topic><topic>Phenol red</topic><topic>Phenolsulfonphthalein</topic><topic>Plant Development - drug effects</topic><topic>Plant Roots - growth & development</topic><topic>Plant Roots - microbiology</topic><topic>Pseudomonas aeruginosa</topic><topic>Rhizosphere</topic><topic>Screening</topic><topic>Soil</topic><topic>Soil Microbiology</topic><topic>Stenotrophomonas maltophilia</topic><topic>Stress, Physiological</topic><topic>Triticum - growth & development</topic><topic>Triticum - microbiology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Patil, Chandrashekhar</creatorcontrib><creatorcontrib>Suryawanshi, Rahul</creatorcontrib><creatorcontrib>Koli, Sunil</creatorcontrib><creatorcontrib>Patil, Satish</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Pollution Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Journal of microbiological methods</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Patil, Chandrashekhar</au><au>Suryawanshi, Rahul</au><au>Koli, Sunil</au><au>Patil, Satish</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Improved method for effective screening of ACC (1-aminocyclopropane-1-carboxylate) deaminase producing microorganisms</atitle><jtitle>Journal of microbiological methods</jtitle><addtitle>J Microbiol Methods</addtitle><date>2016-12</date><risdate>2016</risdate><volume>131</volume><spage>102</spage><epage>104</epage><pages>102-104</pages><issn>0167-7012</issn><eissn>1872-8359</eissn><abstract>Aminocyclopropane-1-carboxylate deaminase (ACCD) producing microorganisms support plant growth under a variety of biotic and abiotic stress conditions such as drought, soil salinity, flooding, heavy metal pollution and phyto-pathogen attack. Available screening methods for ACCD give idea only about its primary microbial ACCD activity than the actual potential. In the present investigation, we have simply improved screening method by incorporating pH indicator dyes (phenol red and bromothymol blue) in ACC containing medium. This modification is based on the basic principle that ACCD action releases ammonia which can be detected by color change and zone around the bacterial colony. High color intensity and zone around the colony indicates most potent producer, colony showing only a color change indicates moderate potential and no change in colony color indicates least efficiency. Enzymatic bioassays as well as root elongation studies revealed that ACC-deaminase activity of Pseudomonas aeruginosa, Stenotrophomonas maltophilia and Bacillus subtilis clearly corresponds to their growth on dye incorporated ACC medium. This method could be used to complement the existing screening methods and to speed up the targeted isolation of agriculturally important microorganisms.
[Display omitted]
•Effectively screens ACCD producing microorganisms by incorporating pH indicator dye in ACC deaminase Agar medium•Methods give the visible ACCD production potential on the basis of color change around colonies.•Quantitative, ACC deaminase production by spectrophotometric method are in accordance with plate assay results.•Plant root elongation assays also suggested efficacy of plate based screening method.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>27769905</pmid><doi>10.1016/j.mimet.2016.10.009</doi><tpages>3</tpages></addata></record> |
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subjects | ACC deaminase Agriculture Arachis - growth & development Arachis - microbiology Bacillus subtilis Bacteria - classification Bacteria - enzymology Bacteria - isolation & purification Biological Assay Bromthymol Blue Carbon-Carbon Lyases - analysis Carbon-Carbon Lyases - metabolism Carbon-Carbon Lyases - pharmacology Colony Count, Microbial - methods Color Environmental Monitoring - methods Environmental Pollution Enzyme Assays Hydrogen-Ion Concentration India Lycopersicon esculentum - growth & development Lycopersicon esculentum - microbiology Mass Screening - methods PGPR pH dye Phenol red Phenolsulfonphthalein Plant Development - drug effects Plant Roots - growth & development Plant Roots - microbiology Pseudomonas aeruginosa Rhizosphere Screening Soil Soil Microbiology Stenotrophomonas maltophilia Stress, Physiological Triticum - growth & development Triticum - microbiology |
title | Improved method for effective screening of ACC (1-aminocyclopropane-1-carboxylate) deaminase producing microorganisms |
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