Genetic differentiating Aphis fabae and Aphis craccivora (Hemiptera: Sternorranycha: Aphididae) populations in Egypt using mitochondrial COI
Aphis craccivora and Aphis fabae were found to infest broad bean in Egypt. Aphis craccivora was found to be more dominant than A. fabae; A. craccivora was collected from nine locations that represented different agroecosystems in Egypt. At the same time, A. fabae was found in one location only. Sing...
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| Veröffentlicht in: | Biológia 2016-11, Vol.71 (11), p.1266-1273 |
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| creator | Helmi, Ashraf Sharaf, Abdoallah |
| description | Aphis craccivora
and
Aphis fabae
were found to infest broad bean in Egypt.
Aphis craccivora
was found to be more dominant than
A. fabae; A. craccivora
was collected from nine locations that represented different agroecosystems in Egypt. At the same time,
A. fabae
was found in one location only. Single Nucleotide Polymorphisms (SNPs) in mtDNA Cytochrome c oxidase subunit I (COI) were used to differentiate
A. fabae
and geographically related populations of
A. craccivora
in Egypt. For this purpose COI primers were designed and registered in GenBank. The primers were successful in detecting genetic variations between both related
Aphis
species as well as among different geographic populations of
A. craccivora
. Fourteen SNPs were found to differ among two biotypes of
A. craccivora
in the Nile Delta and Upper Egypt, probably due to environmental variations in the two different ecosystems. |
| doi_str_mv | 10.1515/biolog-2016-0151 |
| format | Article |
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and
Aphis fabae
were found to infest broad bean in Egypt.
Aphis craccivora
was found to be more dominant than
A. fabae; A. craccivora
was collected from nine locations that represented different agroecosystems in Egypt. At the same time,
A. fabae
was found in one location only. Single Nucleotide Polymorphisms (SNPs) in mtDNA Cytochrome c oxidase subunit I (COI) were used to differentiate
A. fabae
and geographically related populations of
A. craccivora
in Egypt. For this purpose COI primers were designed and registered in GenBank. The primers were successful in detecting genetic variations between both related
Aphis
species as well as among different geographic populations of
A. craccivora
. Fourteen SNPs were found to differ among two biotypes of
A. craccivora
in the Nile Delta and Upper Egypt, probably due to environmental variations in the two different ecosystems.</description><identifier>ISSN: 0006-3088</identifier><identifier>EISSN: 1336-9563</identifier><identifier>DOI: 10.1515/biolog-2016-0151</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Agricultural ecosystems ; Aphididae ; Aphis ; Aphis craccivora ; Aphis fabae ; Biotypes ; Broad beans ; Cell Biology ; COI ; Cytochrome-c oxidase ; Cytochromes ; DNA sequencing ; Genetic diversity ; Hemiptera ; Life Sciences ; Microbiology ; Mitochondria ; Mitochondrial DNA ; molecular phylogeny ; Nucleotides ; Plant Sciences ; Populations ; Single-nucleotide polymorphism ; SNPs ; Zoology</subject><ispartof>Biológia, 2016-11, Vol.71 (11), p.1266-1273</ispartof><rights>Slovak Academy of Sciences 2016</rights><rights>Copyright Walter de Gruyter GmbH 2016</rights><rights>Copyright Springer Nature B.V. 2016</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c431t-321227a39a4d23df4e53ca38fd9f41a2c5a47d948544dde657e3a0e5653d1ba43</citedby><cites>FETCH-LOGICAL-c431t-321227a39a4d23df4e53ca38fd9f41a2c5a47d948544dde657e3a0e5653d1ba43</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1515/biolog-2016-0151$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1515/biolog-2016-0151$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27903,27904,41467,42536,51297</link.rule.ids></links><search><creatorcontrib>Helmi, Ashraf</creatorcontrib><creatorcontrib>Sharaf, Abdoallah</creatorcontrib><title>Genetic differentiating Aphis fabae and Aphis craccivora (Hemiptera: Sternorranycha: Aphididae) populations in Egypt using mitochondrial COI</title><title>Biológia</title><addtitle>Biologia</addtitle><description>Aphis craccivora
and
Aphis fabae
were found to infest broad bean in Egypt.
Aphis craccivora
was found to be more dominant than
A. fabae; A. craccivora
was collected from nine locations that represented different agroecosystems in Egypt. At the same time,
A. fabae
was found in one location only. Single Nucleotide Polymorphisms (SNPs) in mtDNA Cytochrome c oxidase subunit I (COI) were used to differentiate
A. fabae
and geographically related populations of
A. craccivora
in Egypt. For this purpose COI primers were designed and registered in GenBank. The primers were successful in detecting genetic variations between both related
Aphis
species as well as among different geographic populations of
A. craccivora
. Fourteen SNPs were found to differ among two biotypes of
A. craccivora
in the Nile Delta and Upper Egypt, probably due to environmental variations in the two different ecosystems.</description><subject>Agricultural ecosystems</subject><subject>Aphididae</subject><subject>Aphis</subject><subject>Aphis craccivora</subject><subject>Aphis fabae</subject><subject>Biotypes</subject><subject>Broad beans</subject><subject>Cell Biology</subject><subject>COI</subject><subject>Cytochrome-c oxidase</subject><subject>Cytochromes</subject><subject>DNA sequencing</subject><subject>Genetic diversity</subject><subject>Hemiptera</subject><subject>Life Sciences</subject><subject>Microbiology</subject><subject>Mitochondria</subject><subject>Mitochondrial DNA</subject><subject>molecular phylogeny</subject><subject>Nucleotides</subject><subject>Plant Sciences</subject><subject>Populations</subject><subject>Single-nucleotide polymorphism</subject><subject>SNPs</subject><subject>Zoology</subject><issn>0006-3088</issn><issn>1336-9563</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqNkU1r3DAQhk1podu09x4FvaQHtxp9-KOnhiVNAoEcmpzFrCR7FbySK9kt-x_yoyPjHEIhpbqMRrzvM4PeovgI9AtIkF93LgyhLxmFqqT55VWxAc6rspUVf11sKKVVyWnTvC3epXRPqaglhU3xcGG9nZwmxnWdjdZPDifne3I27l0iHe7QEvTmqdcRtXa_Q0RyemkPbpxsxG_kZy4-xIj-qPe5X8TGGbSfyRjGecjI4BNxnpz3x3Eic1pGHNwU9D54Ex0OZHtz9b540-GQ7IenelLc_Ti_3V6W1zcXV9uz61ILDlPJGTBWI29RGMZNJ6zkGnnTmbYTgExLFLVpRSOFMMZWsrYcqZWV5AZ2KPhJcbpyxxh-zTZN6uCStsOA3oY5KWiqhrOWQ5Oln_6S3oc5-rydYhyoAMEE_EuVWQyElECziq4qHUNK0XZqjO6A8aiAqiVEtYaolhDVEmK2fF8tf3DIf2xsH-djvjzjv2CtIR9WVRkBKyLlab7_Hy9_BL7wtqA</recordid><startdate>20161101</startdate><enddate>20161101</enddate><creator>Helmi, Ashraf</creator><creator>Sharaf, Abdoallah</creator><general>Springer International Publishing</general><general>De Gruyter</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7T7</scope><scope>7TK</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope></search><sort><creationdate>20161101</creationdate><title>Genetic differentiating Aphis fabae and Aphis craccivora (Hemiptera: Sternorranycha: Aphididae) populations in Egypt using mitochondrial COI</title><author>Helmi, Ashraf ; Sharaf, Abdoallah</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c431t-321227a39a4d23df4e53ca38fd9f41a2c5a47d948544dde657e3a0e5653d1ba43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Agricultural ecosystems</topic><topic>Aphididae</topic><topic>Aphis</topic><topic>Aphis craccivora</topic><topic>Aphis fabae</topic><topic>Biotypes</topic><topic>Broad beans</topic><topic>Cell Biology</topic><topic>COI</topic><topic>Cytochrome-c oxidase</topic><topic>Cytochromes</topic><topic>DNA sequencing</topic><topic>Genetic diversity</topic><topic>Hemiptera</topic><topic>Life Sciences</topic><topic>Microbiology</topic><topic>Mitochondria</topic><topic>Mitochondrial DNA</topic><topic>molecular phylogeny</topic><topic>Nucleotides</topic><topic>Plant Sciences</topic><topic>Populations</topic><topic>Single-nucleotide polymorphism</topic><topic>SNPs</topic><topic>Zoology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Helmi, Ashraf</creatorcontrib><creatorcontrib>Sharaf, Abdoallah</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Immunology Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Health Medical collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biological Sciences</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><jtitle>Biológia</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Helmi, Ashraf</au><au>Sharaf, Abdoallah</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic differentiating Aphis fabae and Aphis craccivora (Hemiptera: Sternorranycha: Aphididae) populations in Egypt using mitochondrial COI</atitle><jtitle>Biológia</jtitle><stitle>Biologia</stitle><date>2016-11-01</date><risdate>2016</risdate><volume>71</volume><issue>11</issue><spage>1266</spage><epage>1273</epage><pages>1266-1273</pages><issn>0006-3088</issn><eissn>1336-9563</eissn><abstract>Aphis craccivora
and
Aphis fabae
were found to infest broad bean in Egypt.
Aphis craccivora
was found to be more dominant than
A. fabae; A. craccivora
was collected from nine locations that represented different agroecosystems in Egypt. At the same time,
A. fabae
was found in one location only. Single Nucleotide Polymorphisms (SNPs) in mtDNA Cytochrome c oxidase subunit I (COI) were used to differentiate
A. fabae
and geographically related populations of
A. craccivora
in Egypt. For this purpose COI primers were designed and registered in GenBank. The primers were successful in detecting genetic variations between both related
Aphis
species as well as among different geographic populations of
A. craccivora
. Fourteen SNPs were found to differ among two biotypes of
A. craccivora
in the Nile Delta and Upper Egypt, probably due to environmental variations in the two different ecosystems.</abstract><cop>Cham</cop><pub>Springer International Publishing</pub><doi>10.1515/biolog-2016-0151</doi><tpages>8</tpages></addata></record> |
| fulltext | fulltext |
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| ispartof | Biológia, 2016-11, Vol.71 (11), p.1266-1273 |
| issn | 0006-3088 1336-9563 |
| language | eng |
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| source | SpringerLink Journals - AutoHoldings |
| subjects | Agricultural ecosystems Aphididae Aphis Aphis craccivora Aphis fabae Biotypes Broad beans Cell Biology COI Cytochrome-c oxidase Cytochromes DNA sequencing Genetic diversity Hemiptera Life Sciences Microbiology Mitochondria Mitochondrial DNA molecular phylogeny Nucleotides Plant Sciences Populations Single-nucleotide polymorphism SNPs Zoology |
| title | Genetic differentiating Aphis fabae and Aphis craccivora (Hemiptera: Sternorranycha: Aphididae) populations in Egypt using mitochondrial COI |
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