Structural and lipid-binding characterization of human annexin A13a reveals strong differences with its long A13b isoform
Annexin A13 is the founder member of the vertebrate family of annexins, which are comprised of a tetrad of unique conserved domains responsible for calcium-dependent binding to membranes. Its expression is restricted to epithelial intestinal and kidney cells. Alternative splicing in the N-terminal r...
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Veröffentlicht in: | Biological chemistry 2017-03, Vol.398 (3), p.359-371 |
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description | Annexin A13 is the founder member of the vertebrate family of annexins, which are comprised of a tetrad of unique conserved domains responsible for calcium-dependent binding to membranes. Its expression is restricted to epithelial intestinal and kidney cells. Alternative splicing in the N-terminal region generates two isoforms, A13a and A13b, differing in a deletion of 41 residues in the former. We have confirmed the expression of both isoforms in human colon adenocarcinoma cells at the mRNA and protein levels. We have cloned, expressed, and purified human annexin A13a for the first time to analyze its structural characteristics. Its secondary structure and thermal stability differs greatly from the A13b isoform. The only tryptophan residue (Trp
) is buried in the protein core in the absence of calcium but is exposed to the solvent after calcium binding even though circular dichroism spectra are quite similar. Non-myristoylated annexin A13a binds in a calcium-dependent manner to acidic phospholipids but not to neutral or raft-like liposomes. Calcium requirements for binding to phosphatidylserine are around 6-fold lower than those required by the A13b isoform. This fact could account for the different subcellular localization of both annexins as binding to basolateral membranes seems to be calcium-dependent and myristoylation-independent. |
doi_str_mv | 10.1515/hsz-2016-0242 |
format | Article |
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) is buried in the protein core in the absence of calcium but is exposed to the solvent after calcium binding even though circular dichroism spectra are quite similar. Non-myristoylated annexin A13a binds in a calcium-dependent manner to acidic phospholipids but not to neutral or raft-like liposomes. Calcium requirements for binding to phosphatidylserine are around 6-fold lower than those required by the A13b isoform. This fact could account for the different subcellular localization of both annexins as binding to basolateral membranes seems to be calcium-dependent and myristoylation-independent.</description><identifier>ISSN: 1431-6730</identifier><identifier>EISSN: 1437-4315</identifier><identifier>DOI: 10.1515/hsz-2016-0242</identifier><identifier>PMID: 27676605</identifier><language>eng</language><publisher>Germany: De Gruyter</publisher><subject>Adenocarcinoma ; Alternative splicing ; annexin ; Annexins ; Binding ; Calcium ; calcium binding ; Circular dichroism ; circular dichroism spectroscopy ; Circularity ; Clonal deletion ; Colon ; Dichroism ; fluorescence emission spectroscopy ; Gene expression ; Intestine ; Isoforms ; Liposomes ; Localization ; Membranes ; mRNA ; Myristoylation ; Phosphatidylserine ; phospholipid binding ; Phospholipids ; Protein structure ; Residues ; Secondary structure ; Splicing ; Stability analysis ; Structural analysis ; Thermal stability ; Tryptophan</subject><ispartof>Biological chemistry, 2017-03, Vol.398 (3), p.359-371</ispartof><rights>Copyright Walter de Gruyter GmbH 2017</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c374t-ed63e6baa5d87417a55a28e89123054fe1f7140f56ba5a9815690f650a4e73373</citedby><cites>FETCH-LOGICAL-c374t-ed63e6baa5d87417a55a28e89123054fe1f7140f56ba5a9815690f650a4e73373</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.degruyter.com/document/doi/10.1515/hsz-2016-0242/pdf$$EPDF$$P50$$Gwalterdegruyter$$H</linktopdf><linktohtml>$$Uhttps://www.degruyter.com/document/doi/10.1515/hsz-2016-0242/html$$EHTML$$P50$$Gwalterdegruyter$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,66497,68281</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27676605$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Fernández-Lizarbe, Sara</creatorcontrib><creatorcontrib>Lecona, Emilio</creatorcontrib><creatorcontrib>Santiago-Gómez, Angélica</creatorcontrib><creatorcontrib>Olmo, Nieves</creatorcontrib><creatorcontrib>Lizarbe, María Antonia</creatorcontrib><creatorcontrib>Turnay, Javier</creatorcontrib><title>Structural and lipid-binding characterization of human annexin A13a reveals strong differences with its long A13b isoform</title><title>Biological chemistry</title><addtitle>Biol Chem</addtitle><description>Annexin A13 is the founder member of the vertebrate family of annexins, which are comprised of a tetrad of unique conserved domains responsible for calcium-dependent binding to membranes. Its expression is restricted to epithelial intestinal and kidney cells. Alternative splicing in the N-terminal region generates two isoforms, A13a and A13b, differing in a deletion of 41 residues in the former. We have confirmed the expression of both isoforms in human colon adenocarcinoma cells at the mRNA and protein levels. We have cloned, expressed, and purified human annexin A13a for the first time to analyze its structural characteristics. Its secondary structure and thermal stability differs greatly from the A13b isoform. The only tryptophan residue (Trp
) is buried in the protein core in the absence of calcium but is exposed to the solvent after calcium binding even though circular dichroism spectra are quite similar. Non-myristoylated annexin A13a binds in a calcium-dependent manner to acidic phospholipids but not to neutral or raft-like liposomes. Calcium requirements for binding to phosphatidylserine are around 6-fold lower than those required by the A13b isoform. This fact could account for the different subcellular localization of both annexins as binding to basolateral membranes seems to be calcium-dependent and myristoylation-independent.</description><subject>Adenocarcinoma</subject><subject>Alternative splicing</subject><subject>annexin</subject><subject>Annexins</subject><subject>Binding</subject><subject>Calcium</subject><subject>calcium binding</subject><subject>Circular dichroism</subject><subject>circular dichroism spectroscopy</subject><subject>Circularity</subject><subject>Clonal deletion</subject><subject>Colon</subject><subject>Dichroism</subject><subject>fluorescence emission spectroscopy</subject><subject>Gene expression</subject><subject>Intestine</subject><subject>Isoforms</subject><subject>Liposomes</subject><subject>Localization</subject><subject>Membranes</subject><subject>mRNA</subject><subject>Myristoylation</subject><subject>Phosphatidylserine</subject><subject>phospholipid binding</subject><subject>Phospholipids</subject><subject>Protein structure</subject><subject>Residues</subject><subject>Secondary structure</subject><subject>Splicing</subject><subject>Stability analysis</subject><subject>Structural analysis</subject><subject>Thermal stability</subject><subject>Tryptophan</subject><issn>1431-6730</issn><issn>1437-4315</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><recordid>eNptkc9LHDEUx4NUql179FoCvXhJm0x-zUAvItoWhB7Uc8jOvLiRmWSbZNT1r2_WVSmlEMiD93nfhPdB6JjRL0wy-XWVn0hDmSK0Ec0eOmSCayI4k--ea0aU5vQAfcj5jlLaUsHfo4NGK60UlYdoc1XS3Jc52RHbMODRr_1Alj4MPtzifmWT7Qsk_2SLjwFHh1fzZENlAzz6gE8ZtzjBPdgx41xSrFODdw4ShB4yfvBlhX3JeNx2Kr3EPkcX03SE9l0dgo8v9wLdXJxfn_0gl7--_zw7vSQ916IQGBQHtbRWDq0WTFspbdNC27GGUykcMKeZoE5WRtquZVJ11ClJrQDNueYLdLLLXaf4e4ZczORzD-NoA8Q5G9ZK1mgp2q6in_9B7-KcQv2dYV1Dacd5PQtEdlSfYs4JnFknP9m0MYyarRNTnZitE7N1UvlPL6nzcoLhjX6VUIFvO-DBjnXXA9ymeVOLv17_b3DXci47_gd995ry</recordid><startdate>20170301</startdate><enddate>20170301</enddate><creator>Fernández-Lizarbe, Sara</creator><creator>Lecona, Emilio</creator><creator>Santiago-Gómez, Angélica</creator><creator>Olmo, Nieves</creator><creator>Lizarbe, María Antonia</creator><creator>Turnay, Javier</creator><general>De Gruyter</general><general>Walter de Gruyter GmbH</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7QP</scope><scope>7QR</scope><scope>7T5</scope><scope>7T7</scope><scope>7TK</scope><scope>7TM</scope><scope>7TO</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20170301</creationdate><title>Structural and lipid-binding characterization of human annexin A13a reveals strong differences with its long A13b isoform</title><author>Fernández-Lizarbe, Sara ; Lecona, Emilio ; Santiago-Gómez, Angélica ; Olmo, Nieves ; Lizarbe, María Antonia ; Turnay, Javier</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c374t-ed63e6baa5d87417a55a28e89123054fe1f7140f56ba5a9815690f650a4e73373</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Adenocarcinoma</topic><topic>Alternative splicing</topic><topic>annexin</topic><topic>Annexins</topic><topic>Binding</topic><topic>Calcium</topic><topic>calcium binding</topic><topic>Circular dichroism</topic><topic>circular dichroism spectroscopy</topic><topic>Circularity</topic><topic>Clonal deletion</topic><topic>Colon</topic><topic>Dichroism</topic><topic>fluorescence emission spectroscopy</topic><topic>Gene expression</topic><topic>Intestine</topic><topic>Isoforms</topic><topic>Liposomes</topic><topic>Localization</topic><topic>Membranes</topic><topic>mRNA</topic><topic>Myristoylation</topic><topic>Phosphatidylserine</topic><topic>phospholipid binding</topic><topic>Phospholipids</topic><topic>Protein structure</topic><topic>Residues</topic><topic>Secondary structure</topic><topic>Splicing</topic><topic>Stability analysis</topic><topic>Structural analysis</topic><topic>Thermal stability</topic><topic>Tryptophan</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Fernández-Lizarbe, Sara</creatorcontrib><creatorcontrib>Lecona, Emilio</creatorcontrib><creatorcontrib>Santiago-Gómez, Angélica</creatorcontrib><creatorcontrib>Olmo, Nieves</creatorcontrib><creatorcontrib>Lizarbe, María Antonia</creatorcontrib><creatorcontrib>Turnay, Javier</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Immunology Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Biological chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Fernández-Lizarbe, Sara</au><au>Lecona, Emilio</au><au>Santiago-Gómez, Angélica</au><au>Olmo, Nieves</au><au>Lizarbe, María Antonia</au><au>Turnay, Javier</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Structural and lipid-binding characterization of human annexin A13a reveals strong differences with its long A13b isoform</atitle><jtitle>Biological chemistry</jtitle><addtitle>Biol Chem</addtitle><date>2017-03-01</date><risdate>2017</risdate><volume>398</volume><issue>3</issue><spage>359</spage><epage>371</epage><pages>359-371</pages><issn>1431-6730</issn><eissn>1437-4315</eissn><abstract>Annexin A13 is the founder member of the vertebrate family of annexins, which are comprised of a tetrad of unique conserved domains responsible for calcium-dependent binding to membranes. Its expression is restricted to epithelial intestinal and kidney cells. Alternative splicing in the N-terminal region generates two isoforms, A13a and A13b, differing in a deletion of 41 residues in the former. We have confirmed the expression of both isoforms in human colon adenocarcinoma cells at the mRNA and protein levels. We have cloned, expressed, and purified human annexin A13a for the first time to analyze its structural characteristics. Its secondary structure and thermal stability differs greatly from the A13b isoform. The only tryptophan residue (Trp
) is buried in the protein core in the absence of calcium but is exposed to the solvent after calcium binding even though circular dichroism spectra are quite similar. Non-myristoylated annexin A13a binds in a calcium-dependent manner to acidic phospholipids but not to neutral or raft-like liposomes. Calcium requirements for binding to phosphatidylserine are around 6-fold lower than those required by the A13b isoform. This fact could account for the different subcellular localization of both annexins as binding to basolateral membranes seems to be calcium-dependent and myristoylation-independent.</abstract><cop>Germany</cop><pub>De Gruyter</pub><pmid>27676605</pmid><doi>10.1515/hsz-2016-0242</doi><tpages>13</tpages></addata></record> |
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subjects | Adenocarcinoma Alternative splicing annexin Annexins Binding Calcium calcium binding Circular dichroism circular dichroism spectroscopy Circularity Clonal deletion Colon Dichroism fluorescence emission spectroscopy Gene expression Intestine Isoforms Liposomes Localization Membranes mRNA Myristoylation Phosphatidylserine phospholipid binding Phospholipids Protein structure Residues Secondary structure Splicing Stability analysis Structural analysis Thermal stability Tryptophan |
title | Structural and lipid-binding characterization of human annexin A13a reveals strong differences with its long A13b isoform |
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