NGS-based 100-gene panel of hypopigmentation identifies mutations in Chinese Hermansky-Pudlak syndrome patients
Summary Hermansky–Pudlak syndrome (HPS) is a rare recessive disorder characterized by hypopigmentation, bleeding diathesis, and other symptoms due to multiple defects in lysosome‐related organelles. Ten HPS subtypes have been identified with mutations in HPS1 to HPS10. Only four patients with HPS‐1...
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Veröffentlicht in: | Pigment cell and melanoma research 2016-11, Vol.29 (6), p.702-706 |
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container_title | Pigment cell and melanoma research |
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creator | Wei, Aihua Yuan, Yefeng Bai, Dayong Ma, Jing Hao, Zhenhua Zhang, Yingzi Yu, Jiaying Zhou, Zhiyong Yang, Lin Yang, Xiumin Li, Li Li, Wei |
description | Summary
Hermansky–Pudlak syndrome (HPS) is a rare recessive disorder characterized by hypopigmentation, bleeding diathesis, and other symptoms due to multiple defects in lysosome‐related organelles. Ten HPS subtypes have been identified with mutations in HPS1 to HPS10. Only four patients with HPS‐1 have been reported in Chinese population. Using next‐generation sequencing (NGS), we have screened 100 hypopigmentation genes and identified four HPS‐1, two HPS‐3, one HPS‐5, and three HPS‐6 in Chinese HPS patients with typical ocular or oculocutaneous albinism and the absence of platelet dense granules together with other variable phenotypes. All these patients except one homozygote were compound heterozygotes. Among these mutations, 14 were previously unreported alleles (four in HPS1, three in HPS3, two in HPS5, five in HPS6). Our results demonstrate the feasibility and utility of NGS‐based panel diagnostics for HPS. Genotyping of HPS subtypes is a prerequisite for intervention of subtype‐specific symptoms. |
doi_str_mv | 10.1111/pcmr.12534 |
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Hermansky–Pudlak syndrome (HPS) is a rare recessive disorder characterized by hypopigmentation, bleeding diathesis, and other symptoms due to multiple defects in lysosome‐related organelles. Ten HPS subtypes have been identified with mutations in HPS1 to HPS10. Only four patients with HPS‐1 have been reported in Chinese population. Using next‐generation sequencing (NGS), we have screened 100 hypopigmentation genes and identified four HPS‐1, two HPS‐3, one HPS‐5, and three HPS‐6 in Chinese HPS patients with typical ocular or oculocutaneous albinism and the absence of platelet dense granules together with other variable phenotypes. All these patients except one homozygote were compound heterozygotes. Among these mutations, 14 were previously unreported alleles (four in HPS1, three in HPS3, two in HPS5, five in HPS6). Our results demonstrate the feasibility and utility of NGS‐based panel diagnostics for HPS. Genotyping of HPS subtypes is a prerequisite for intervention of subtype‐specific symptoms.</description><identifier>ISSN: 1755-1471</identifier><identifier>EISSN: 1755-148X</identifier><identifier>DOI: 10.1111/pcmr.12534</identifier><identifier>PMID: 27593200</identifier><language>eng</language><publisher>England: Blackwell Publishing Ltd</publisher><subject>Adaptor Protein Complex 3 - genetics ; Adaptor Protein Complex beta Subunits - genetics ; Adult ; albinism ; Biomarkers - analysis ; Carrier Proteins - genetics ; Child ; Child, Preschool ; Female ; Genotype ; Hermanski-Pudlak Syndrome - diagnosis ; Hermanski-Pudlak Syndrome - genetics ; Hermansky-Pudlak syndrome ; High-Throughput Nucleotide Sequencing - methods ; Humans ; Hypopigmentation - genetics ; Infant ; Intracellular Signaling Peptides and Proteins - genetics ; lysosome-related organelles ; Male ; Membrane Proteins - genetics ; Mutation ; next-generation sequencing ; Pedigree ; previouslyunreported alleles</subject><ispartof>Pigment cell and melanoma research, 2016-11, Vol.29 (6), p.702-706</ispartof><rights>2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd</rights><rights>2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.</rights><rights>Copyright © 2016 John Wiley & Sons A/S</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3914-1637e020376da168191c408c69cdacbef644134a9b2dc02d6797bd121074e9e43</citedby><cites>FETCH-LOGICAL-c3914-1637e020376da168191c408c69cdacbef644134a9b2dc02d6797bd121074e9e43</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fpcmr.12534$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fpcmr.12534$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1417,27924,27925,45574,45575</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27593200$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wei, Aihua</creatorcontrib><creatorcontrib>Yuan, Yefeng</creatorcontrib><creatorcontrib>Bai, Dayong</creatorcontrib><creatorcontrib>Ma, Jing</creatorcontrib><creatorcontrib>Hao, Zhenhua</creatorcontrib><creatorcontrib>Zhang, Yingzi</creatorcontrib><creatorcontrib>Yu, Jiaying</creatorcontrib><creatorcontrib>Zhou, Zhiyong</creatorcontrib><creatorcontrib>Yang, Lin</creatorcontrib><creatorcontrib>Yang, Xiumin</creatorcontrib><creatorcontrib>Li, Li</creatorcontrib><creatorcontrib>Li, Wei</creatorcontrib><title>NGS-based 100-gene panel of hypopigmentation identifies mutations in Chinese Hermansky-Pudlak syndrome patients</title><title>Pigment cell and melanoma research</title><addtitle>Pigment Cell Melanoma Res</addtitle><description>Summary
Hermansky–Pudlak syndrome (HPS) is a rare recessive disorder characterized by hypopigmentation, bleeding diathesis, and other symptoms due to multiple defects in lysosome‐related organelles. Ten HPS subtypes have been identified with mutations in HPS1 to HPS10. Only four patients with HPS‐1 have been reported in Chinese population. Using next‐generation sequencing (NGS), we have screened 100 hypopigmentation genes and identified four HPS‐1, two HPS‐3, one HPS‐5, and three HPS‐6 in Chinese HPS patients with typical ocular or oculocutaneous albinism and the absence of platelet dense granules together with other variable phenotypes. All these patients except one homozygote were compound heterozygotes. Among these mutations, 14 were previously unreported alleles (four in HPS1, three in HPS3, two in HPS5, five in HPS6). Our results demonstrate the feasibility and utility of NGS‐based panel diagnostics for HPS. Genotyping of HPS subtypes is a prerequisite for intervention of subtype‐specific symptoms.</description><subject>Adaptor Protein Complex 3 - genetics</subject><subject>Adaptor Protein Complex beta Subunits - genetics</subject><subject>Adult</subject><subject>albinism</subject><subject>Biomarkers - analysis</subject><subject>Carrier Proteins - genetics</subject><subject>Child</subject><subject>Child, Preschool</subject><subject>Female</subject><subject>Genotype</subject><subject>Hermanski-Pudlak Syndrome - diagnosis</subject><subject>Hermanski-Pudlak Syndrome - genetics</subject><subject>Hermansky-Pudlak syndrome</subject><subject>High-Throughput Nucleotide Sequencing - methods</subject><subject>Humans</subject><subject>Hypopigmentation - genetics</subject><subject>Infant</subject><subject>Intracellular Signaling Peptides and Proteins - genetics</subject><subject>lysosome-related organelles</subject><subject>Male</subject><subject>Membrane Proteins - genetics</subject><subject>Mutation</subject><subject>next-generation sequencing</subject><subject>Pedigree</subject><subject>previouslyunreported alleles</subject><issn>1755-1471</issn><issn>1755-148X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kU9v1DAQxS0EoqVw4QMgS1wQUlo7duzkSFewrVTKij-iN8uJJ627iZ3aiSDfHm_T7qEH5jIj6_eexvMQekvJMU11MjR9OKZ5wfgzdEhlUWSUl1fP97OkB-hVjLeECFJU7CU6yGXqOSGHyF-uf2S1jmAwJSS7Bgd40A467Ft8Mw9-sNc9uFGP1jtsTRptayHiflreIrYOr26sgwj4DEKvXdzO2WYynd7iODsTfL_zHG3SxtfoRau7CG8e-hH69eXzz9VZdvFtfb76dJE1rKI8o4JJIDlhUhhNRUkr2nBSNqJqjG5qaAXnlHFd1blpSG6ErGRtaE6J5FABZ0fow-I7BH83QRxVb2MDXZf-5qeoaMkKXoqS7ND3T9BbPwWXtksULzhPUJWojwvVBB9jgFYNwfY6zIoStYtB7WJQ9zEk-N2D5VT3YPbo490TQBfgj-1g_o-V2qy-fn80zRaNjSP83Wt02CohmSzU78u1Wm8EYaebK3XK_gELOaEe</recordid><startdate>201611</startdate><enddate>201611</enddate><creator>Wei, Aihua</creator><creator>Yuan, Yefeng</creator><creator>Bai, Dayong</creator><creator>Ma, Jing</creator><creator>Hao, Zhenhua</creator><creator>Zhang, Yingzi</creator><creator>Yu, Jiaying</creator><creator>Zhou, Zhiyong</creator><creator>Yang, Lin</creator><creator>Yang, Xiumin</creator><creator>Li, Li</creator><creator>Li, Wei</creator><general>Blackwell Publishing Ltd</general><general>Wiley Subscription Services, Inc</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7TO</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>201611</creationdate><title>NGS-based 100-gene panel of hypopigmentation identifies mutations in Chinese Hermansky-Pudlak syndrome patients</title><author>Wei, Aihua ; Yuan, Yefeng ; Bai, Dayong ; Ma, Jing ; Hao, Zhenhua ; Zhang, Yingzi ; Yu, Jiaying ; Zhou, Zhiyong ; Yang, Lin ; Yang, Xiumin ; Li, Li ; Li, Wei</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3914-1637e020376da168191c408c69cdacbef644134a9b2dc02d6797bd121074e9e43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Adaptor Protein Complex 3 - genetics</topic><topic>Adaptor Protein Complex beta Subunits - genetics</topic><topic>Adult</topic><topic>albinism</topic><topic>Biomarkers - analysis</topic><topic>Carrier Proteins - genetics</topic><topic>Child</topic><topic>Child, Preschool</topic><topic>Female</topic><topic>Genotype</topic><topic>Hermanski-Pudlak Syndrome - diagnosis</topic><topic>Hermanski-Pudlak Syndrome - genetics</topic><topic>Hermansky-Pudlak syndrome</topic><topic>High-Throughput Nucleotide Sequencing - methods</topic><topic>Humans</topic><topic>Hypopigmentation - genetics</topic><topic>Infant</topic><topic>Intracellular Signaling Peptides and Proteins - genetics</topic><topic>lysosome-related organelles</topic><topic>Male</topic><topic>Membrane Proteins - genetics</topic><topic>Mutation</topic><topic>next-generation sequencing</topic><topic>Pedigree</topic><topic>previouslyunreported alleles</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wei, Aihua</creatorcontrib><creatorcontrib>Yuan, Yefeng</creatorcontrib><creatorcontrib>Bai, Dayong</creatorcontrib><creatorcontrib>Ma, Jing</creatorcontrib><creatorcontrib>Hao, Zhenhua</creatorcontrib><creatorcontrib>Zhang, Yingzi</creatorcontrib><creatorcontrib>Yu, Jiaying</creatorcontrib><creatorcontrib>Zhou, Zhiyong</creatorcontrib><creatorcontrib>Yang, Lin</creatorcontrib><creatorcontrib>Yang, Xiumin</creatorcontrib><creatorcontrib>Li, Li</creatorcontrib><creatorcontrib>Li, Wei</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Pigment cell and melanoma research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wei, Aihua</au><au>Yuan, Yefeng</au><au>Bai, Dayong</au><au>Ma, Jing</au><au>Hao, Zhenhua</au><au>Zhang, Yingzi</au><au>Yu, Jiaying</au><au>Zhou, Zhiyong</au><au>Yang, Lin</au><au>Yang, Xiumin</au><au>Li, Li</au><au>Li, Wei</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>NGS-based 100-gene panel of hypopigmentation identifies mutations in Chinese Hermansky-Pudlak syndrome patients</atitle><jtitle>Pigment cell and melanoma research</jtitle><addtitle>Pigment Cell Melanoma Res</addtitle><date>2016-11</date><risdate>2016</risdate><volume>29</volume><issue>6</issue><spage>702</spage><epage>706</epage><pages>702-706</pages><issn>1755-1471</issn><eissn>1755-148X</eissn><abstract>Summary
Hermansky–Pudlak syndrome (HPS) is a rare recessive disorder characterized by hypopigmentation, bleeding diathesis, and other symptoms due to multiple defects in lysosome‐related organelles. Ten HPS subtypes have been identified with mutations in HPS1 to HPS10. Only four patients with HPS‐1 have been reported in Chinese population. Using next‐generation sequencing (NGS), we have screened 100 hypopigmentation genes and identified four HPS‐1, two HPS‐3, one HPS‐5, and three HPS‐6 in Chinese HPS patients with typical ocular or oculocutaneous albinism and the absence of platelet dense granules together with other variable phenotypes. All these patients except one homozygote were compound heterozygotes. Among these mutations, 14 were previously unreported alleles (four in HPS1, three in HPS3, two in HPS5, five in HPS6). Our results demonstrate the feasibility and utility of NGS‐based panel diagnostics for HPS. Genotyping of HPS subtypes is a prerequisite for intervention of subtype‐specific symptoms.</abstract><cop>England</cop><pub>Blackwell Publishing Ltd</pub><pmid>27593200</pmid><doi>10.1111/pcmr.12534</doi><tpages>5</tpages></addata></record> |
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subjects | Adaptor Protein Complex 3 - genetics Adaptor Protein Complex beta Subunits - genetics Adult albinism Biomarkers - analysis Carrier Proteins - genetics Child Child, Preschool Female Genotype Hermanski-Pudlak Syndrome - diagnosis Hermanski-Pudlak Syndrome - genetics Hermansky-Pudlak syndrome High-Throughput Nucleotide Sequencing - methods Humans Hypopigmentation - genetics Infant Intracellular Signaling Peptides and Proteins - genetics lysosome-related organelles Male Membrane Proteins - genetics Mutation next-generation sequencing Pedigree previouslyunreported alleles |
title | NGS-based 100-gene panel of hypopigmentation identifies mutations in Chinese Hermansky-Pudlak syndrome patients |
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