Insights into the fluoride-resistant regulation mechanism of Acidithiobacillus ferrooxidans ATCC 23270 based on whole genome microarrays
Abstract Acidophilic microorganisms involved in uranium bioleaching are usually suppressed by dissolved fluoride ions, eventually leading to reduced leaching efficiency. However, little is known about the regulation mechanisms of microbial resistance to fluoride. In this study, the resistance of Aci...
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| Veröffentlicht in: | Journal of industrial microbiology & biotechnology 2016-10, Vol.43 (10), p.1441-1453 |
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| creator | Ma, Liyuan Li, Qian Shen, Li Feng, Xue Xiao, Yunhua Tao, Jiemeng Liang, Yili Yin, Huaqun Liu, Xueduan |
| description | Abstract
Acidophilic microorganisms involved in uranium bioleaching are usually suppressed by dissolved fluoride ions, eventually leading to reduced leaching efficiency. However, little is known about the regulation mechanisms of microbial resistance to fluoride. In this study, the resistance of Acidithiobacillus ferrooxidans ATCC 23270 to fluoride was investigated by detecting bacterial growth fluctuations and ferrous or sulfur oxidation. To explore the regulation mechanism, a whole genome microarray was used to profile the genome-wide expression. The fluoride tolerance of A. ferrooxidans cultured in the presence of FeSO4 was better than that cultured with the S0 substrate. The differentially expressed gene categories closely related to fluoride tolerance included those involved in energy metabolism, cellular processes, protein synthesis, transport, the cell envelope, and binding proteins. This study highlights that the cellular ferrous oxidation ability was enhanced at the lower fluoride concentrations. An overview of the cellular regulation mechanisms of extremophiles to fluoride resistance is discussed. |
| doi_str_mv | 10.1007/s10295-016-1827-6 |
| format | Article |
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Acidophilic microorganisms involved in uranium bioleaching are usually suppressed by dissolved fluoride ions, eventually leading to reduced leaching efficiency. However, little is known about the regulation mechanisms of microbial resistance to fluoride. In this study, the resistance of Acidithiobacillus ferrooxidans ATCC 23270 to fluoride was investigated by detecting bacterial growth fluctuations and ferrous or sulfur oxidation. To explore the regulation mechanism, a whole genome microarray was used to profile the genome-wide expression. The fluoride tolerance of A. ferrooxidans cultured in the presence of FeSO4 was better than that cultured with the S0 substrate. The differentially expressed gene categories closely related to fluoride tolerance included those involved in energy metabolism, cellular processes, protein synthesis, transport, the cell envelope, and binding proteins. This study highlights that the cellular ferrous oxidation ability was enhanced at the lower fluoride concentrations. An overview of the cellular regulation mechanisms of extremophiles to fluoride resistance is discussed.</description><identifier>ISSN: 1367-5435</identifier><identifier>EISSN: 1476-5535</identifier><identifier>DOI: 10.1007/s10295-016-1827-6</identifier><identifier>PMID: 27519020</identifier><language>eng</language><publisher>Berlin/Heidelberg: Oxford University Press</publisher><subject>Acidithiobacillus - drug effects ; Acidithiobacillus - genetics ; Acidithiobacillus - metabolism ; Acidithiobacillus ferrooxidans ; Analysis ; Bacteria ; Biochemistry ; Bioinformatics ; Biomedical and Life Sciences ; Biotechnology ; Energy ; Energy Metabolism - genetics ; Environmental impact ; Extraction processes ; Ferrous Compounds - metabolism ; Fluorides ; Fluorides - toxicity ; Gene expression ; Gene Expression Profiling ; Genetic Engineering ; Genetics and Molecular Biology of Industrial Organisms - Original Paper ; Genomes ; Genomics ; Inorganic Chemistry ; Laboratories ; Leaching ; Life Sciences ; Metabolism ; Microbiology ; Microorganisms ; Minerals ; Oligonucleotide Array Sequence Analysis ; Oxidation ; Oxidation-Reduction ; Protein synthesis ; Studies ; Sulfur ; Sulfur - metabolism ; Uranium</subject><ispartof>Journal of industrial microbiology & biotechnology, 2016-10, Vol.43 (10), p.1441-1453</ispartof><rights>Society for Industrial Microbiology 2016 2016</rights><rights>Society for Industrial Microbiology and Biotechnology 2016</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c479t-ced14a0ad8ec178fdf970d8f08462759337f07b8979123c41d088eb773ba69323</citedby><cites>FETCH-LOGICAL-c479t-ced14a0ad8ec178fdf970d8f08462759337f07b8979123c41d088eb773ba69323</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10295-016-1827-6$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10295-016-1827-6$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27519020$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ma, Liyuan</creatorcontrib><creatorcontrib>Li, Qian</creatorcontrib><creatorcontrib>Shen, Li</creatorcontrib><creatorcontrib>Feng, Xue</creatorcontrib><creatorcontrib>Xiao, Yunhua</creatorcontrib><creatorcontrib>Tao, Jiemeng</creatorcontrib><creatorcontrib>Liang, Yili</creatorcontrib><creatorcontrib>Yin, Huaqun</creatorcontrib><creatorcontrib>Liu, Xueduan</creatorcontrib><title>Insights into the fluoride-resistant regulation mechanism of Acidithiobacillus ferrooxidans ATCC 23270 based on whole genome microarrays</title><title>Journal of industrial microbiology & biotechnology</title><addtitle>J Ind Microbiol Biotechnol</addtitle><addtitle>J Ind Microbiol Biotechnol</addtitle><description>Abstract
Acidophilic microorganisms involved in uranium bioleaching are usually suppressed by dissolved fluoride ions, eventually leading to reduced leaching efficiency. However, little is known about the regulation mechanisms of microbial resistance to fluoride. In this study, the resistance of Acidithiobacillus ferrooxidans ATCC 23270 to fluoride was investigated by detecting bacterial growth fluctuations and ferrous or sulfur oxidation. To explore the regulation mechanism, a whole genome microarray was used to profile the genome-wide expression. The fluoride tolerance of A. ferrooxidans cultured in the presence of FeSO4 was better than that cultured with the S0 substrate. The differentially expressed gene categories closely related to fluoride tolerance included those involved in energy metabolism, cellular processes, protein synthesis, transport, the cell envelope, and binding proteins. This study highlights that the cellular ferrous oxidation ability was enhanced at the lower fluoride concentrations. An overview of the cellular regulation mechanisms of extremophiles to fluoride resistance is discussed.</description><subject>Acidithiobacillus - drug effects</subject><subject>Acidithiobacillus - genetics</subject><subject>Acidithiobacillus - metabolism</subject><subject>Acidithiobacillus ferrooxidans</subject><subject>Analysis</subject><subject>Bacteria</subject><subject>Biochemistry</subject><subject>Bioinformatics</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Energy</subject><subject>Energy Metabolism - genetics</subject><subject>Environmental impact</subject><subject>Extraction processes</subject><subject>Ferrous Compounds - metabolism</subject><subject>Fluorides</subject><subject>Fluorides - toxicity</subject><subject>Gene expression</subject><subject>Gene Expression Profiling</subject><subject>Genetic Engineering</subject><subject>Genetics and Molecular Biology of Industrial Organisms - Original Paper</subject><subject>Genomes</subject><subject>Genomics</subject><subject>Inorganic Chemistry</subject><subject>Laboratories</subject><subject>Leaching</subject><subject>Life Sciences</subject><subject>Metabolism</subject><subject>Microbiology</subject><subject>Microorganisms</subject><subject>Minerals</subject><subject>Oligonucleotide Array Sequence Analysis</subject><subject>Oxidation</subject><subject>Oxidation-Reduction</subject><subject>Protein synthesis</subject><subject>Studies</subject><subject>Sulfur</subject><subject>Sulfur - 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Academic</collection><collection>Biotechnology Research Abstracts</collection><jtitle>Journal of industrial microbiology & biotechnology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ma, Liyuan</au><au>Li, Qian</au><au>Shen, Li</au><au>Feng, Xue</au><au>Xiao, Yunhua</au><au>Tao, Jiemeng</au><au>Liang, Yili</au><au>Yin, Huaqun</au><au>Liu, Xueduan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Insights into the fluoride-resistant regulation mechanism of Acidithiobacillus ferrooxidans ATCC 23270 based on whole genome microarrays</atitle><jtitle>Journal of industrial microbiology & biotechnology</jtitle><stitle>J Ind Microbiol Biotechnol</stitle><addtitle>J Ind Microbiol Biotechnol</addtitle><date>2016-10-01</date><risdate>2016</risdate><volume>43</volume><issue>10</issue><spage>1441</spage><epage>1453</epage><pages>1441-1453</pages><issn>1367-5435</issn><eissn>1476-5535</eissn><abstract>Abstract
Acidophilic microorganisms involved in uranium bioleaching are usually suppressed by dissolved fluoride ions, eventually leading to reduced leaching efficiency. However, little is known about the regulation mechanisms of microbial resistance to fluoride. In this study, the resistance of Acidithiobacillus ferrooxidans ATCC 23270 to fluoride was investigated by detecting bacterial growth fluctuations and ferrous or sulfur oxidation. To explore the regulation mechanism, a whole genome microarray was used to profile the genome-wide expression. The fluoride tolerance of A. ferrooxidans cultured in the presence of FeSO4 was better than that cultured with the S0 substrate. The differentially expressed gene categories closely related to fluoride tolerance included those involved in energy metabolism, cellular processes, protein synthesis, transport, the cell envelope, and binding proteins. This study highlights that the cellular ferrous oxidation ability was enhanced at the lower fluoride concentrations. An overview of the cellular regulation mechanisms of extremophiles to fluoride resistance is discussed.</abstract><cop>Berlin/Heidelberg</cop><pub>Oxford University Press</pub><pmid>27519020</pmid><doi>10.1007/s10295-016-1827-6</doi><tpages>13</tpages></addata></record> |
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| subjects | Acidithiobacillus - drug effects Acidithiobacillus - genetics Acidithiobacillus - metabolism Acidithiobacillus ferrooxidans Analysis Bacteria Biochemistry Bioinformatics Biomedical and Life Sciences Biotechnology Energy Energy Metabolism - genetics Environmental impact Extraction processes Ferrous Compounds - metabolism Fluorides Fluorides - toxicity Gene expression Gene Expression Profiling Genetic Engineering Genetics and Molecular Biology of Industrial Organisms - Original Paper Genomes Genomics Inorganic Chemistry Laboratories Leaching Life Sciences Metabolism Microbiology Microorganisms Minerals Oligonucleotide Array Sequence Analysis Oxidation Oxidation-Reduction Protein synthesis Studies Sulfur Sulfur - metabolism Uranium |
| title | Insights into the fluoride-resistant regulation mechanism of Acidithiobacillus ferrooxidans ATCC 23270 based on whole genome microarrays |
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