Genetic diversity of Ulva prolifera population in Qingdao coastal water during the green algal blooms revealed by microsatellite
Green tides have occurred in Qingdao coast in China for seven consecutive years from 2007 to 2013. To provide information on the genetic structure of these blooms, 210 free-floating green algae samples isolated from the green tide in Qingdao coast on June 19, 2013 were identified based on the ITS, r...
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| Veröffentlicht in: | Marine pollution bulletin 2016-10, Vol.111 (1-2), p.237-246 |
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| creator | Li, Yue Huang, Hong-jia Li, Hongye Liu, Jiesheng Yang, Weidong |
| description | Green tides have occurred in Qingdao coast in China for seven consecutive years from 2007 to 2013. To provide information on the genetic structure of these blooms, 210 free-floating green algae samples isolated from the green tide in Qingdao coast on June 19, 2013 were identified based on the ITS, rbcL and 5S sequence, and genetic diversity was investigated by microsatellite markers. According to ITS, rbcL and 5S sequence, all the 210 samples belonged to Ulva prolifera. Nei's genetic diversity and Shannon index estimated using eight microsatellite markers indicated that the genetic diversity of U. prolifera population within Qingdao's green bloom in 2013 was low. Taking into account previous reports about life history and physiology of U. prolifera, we proposed that the limited origin area of the free-floating biomass and asexual reproduction of U. prolifera might be responsible for the lower diversity of free floating U. prolifera.
•Genetic diversity of Ulva prolifera population was investigated by microsatellite.•The green tide in Qingdao sea area in 2013 was dominated by a single species.•Genetic diversity of U. prolifera population within Qingdao's green bloom is low. |
| doi_str_mv | 10.1016/j.marpolbul.2016.07.001 |
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•Genetic diversity of Ulva prolifera population was investigated by microsatellite.•The green tide in Qingdao sea area in 2013 was dominated by a single species.•Genetic diversity of U. prolifera population within Qingdao's green bloom is low.</description><identifier>ISSN: 0025-326X</identifier><identifier>EISSN: 1879-3363</identifier><identifier>DOI: 10.1016/j.marpolbul.2016.07.001</identifier><identifier>PMID: 27412412</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>algal blooms ; asexual reproduction ; Biomass ; China ; coastal water ; coasts ; Diversity ; Eutrophication ; genetic markers ; Genetic Variation ; Green tide ; internal transcribed spacers ; life history ; Marine ; Microsatellite ; Microsatellite Repeats ; Oceans and Seas ; Population ; Ulva ; Ulva - genetics ; Ulva - physiology ; Ulva prolifera ; water pollution</subject><ispartof>Marine pollution bulletin, 2016-10, Vol.111 (1-2), p.237-246</ispartof><rights>2016 Elsevier Ltd</rights><rights>Copyright © 2016 Elsevier Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c428t-14e3b6b43f47b8f0b389f537ae53981f7f3f6d68697bb0a0bf700e658358e14a3</citedby><cites>FETCH-LOGICAL-c428t-14e3b6b43f47b8f0b389f537ae53981f7f3f6d68697bb0a0bf700e658358e14a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0025326X16305331$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27412412$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Li, Yue</creatorcontrib><creatorcontrib>Huang, Hong-jia</creatorcontrib><creatorcontrib>Li, Hongye</creatorcontrib><creatorcontrib>Liu, Jiesheng</creatorcontrib><creatorcontrib>Yang, Weidong</creatorcontrib><title>Genetic diversity of Ulva prolifera population in Qingdao coastal water during the green algal blooms revealed by microsatellite</title><title>Marine pollution bulletin</title><addtitle>Mar Pollut Bull</addtitle><description>Green tides have occurred in Qingdao coast in China for seven consecutive years from 2007 to 2013. To provide information on the genetic structure of these blooms, 210 free-floating green algae samples isolated from the green tide in Qingdao coast on June 19, 2013 were identified based on the ITS, rbcL and 5S sequence, and genetic diversity was investigated by microsatellite markers. According to ITS, rbcL and 5S sequence, all the 210 samples belonged to Ulva prolifera. Nei's genetic diversity and Shannon index estimated using eight microsatellite markers indicated that the genetic diversity of U. prolifera population within Qingdao's green bloom in 2013 was low. Taking into account previous reports about life history and physiology of U. prolifera, we proposed that the limited origin area of the free-floating biomass and asexual reproduction of U. prolifera might be responsible for the lower diversity of free floating U. prolifera.
•Genetic diversity of Ulva prolifera population was investigated by microsatellite.•The green tide in Qingdao sea area in 2013 was dominated by a single species.•Genetic diversity of U. prolifera population within Qingdao's green bloom is low.</description><subject>algal blooms</subject><subject>asexual reproduction</subject><subject>Biomass</subject><subject>China</subject><subject>coastal water</subject><subject>coasts</subject><subject>Diversity</subject><subject>Eutrophication</subject><subject>genetic markers</subject><subject>Genetic Variation</subject><subject>Green tide</subject><subject>internal transcribed spacers</subject><subject>life history</subject><subject>Marine</subject><subject>Microsatellite</subject><subject>Microsatellite Repeats</subject><subject>Oceans and Seas</subject><subject>Population</subject><subject>Ulva</subject><subject>Ulva - genetics</subject><subject>Ulva - physiology</subject><subject>Ulva prolifera</subject><subject>water pollution</subject><issn>0025-326X</issn><issn>1879-3363</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkU1v1DAQhi0EotvCX6A-cknwRxI7x6qCglQJIViJm2Un48UrJ15sZ6u98dNxtG2vIFkaa_y845l5EbqmpKaEdh_29aTjIXiz-JqVRE1ETQh9gTZUir7ivOMv0YYQ1lacdT8v0GVKe0KIYIK-RhdMNJSVs0F_7mCG7AY8uiPE5PIJB4u3_qjxIQbvLMRyC4fF6-zCjN2Mv7l5N-qAh6BT1h4_6AwRj0sseZx_Ad5FgBlrvyuPxocwJRzhCNrDiM0JT26IIRWR9y7DG_TKap_g7WO8QttPH3_cfq7uv959ub25r4aGyVzRBrjpTMNtI4y0xHDZ25YLDS3vJbXCctuNnex6YQzRxFhBCHSt5K0E2mh-hd6f65axfi-QsppcGkoPeoawJEUlEz1hspH_g_KeiJ6Jgoozuo6UIlh1iK5Yc1KUqNUptVfPTqnVKUWEKk4V5bvHTxYzwfise7KmANdnwOqg9C66pLbf1wpF3TesWYmbMwFlb0cHUaXBwTzA6CIMWY3B_bONvyGKtDY</recordid><startdate>20161015</startdate><enddate>20161015</enddate><creator>Li, Yue</creator><creator>Huang, Hong-jia</creator><creator>Li, Hongye</creator><creator>Liu, Jiesheng</creator><creator>Yang, Weidong</creator><general>Elsevier Ltd</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7ST</scope><scope>7TN</scope><scope>7TV</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H97</scope><scope>L.G</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>SOI</scope></search><sort><creationdate>20161015</creationdate><title>Genetic diversity of Ulva prolifera population in Qingdao coastal water during the green algal blooms revealed by microsatellite</title><author>Li, Yue ; Huang, Hong-jia ; Li, Hongye ; Liu, Jiesheng ; Yang, Weidong</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c428t-14e3b6b43f47b8f0b389f537ae53981f7f3f6d68697bb0a0bf700e658358e14a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>algal blooms</topic><topic>asexual reproduction</topic><topic>Biomass</topic><topic>China</topic><topic>coastal water</topic><topic>coasts</topic><topic>Diversity</topic><topic>Eutrophication</topic><topic>genetic markers</topic><topic>Genetic Variation</topic><topic>Green tide</topic><topic>internal transcribed spacers</topic><topic>life history</topic><topic>Marine</topic><topic>Microsatellite</topic><topic>Microsatellite Repeats</topic><topic>Oceans and Seas</topic><topic>Population</topic><topic>Ulva</topic><topic>Ulva - genetics</topic><topic>Ulva - physiology</topic><topic>Ulva prolifera</topic><topic>water pollution</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Li, Yue</creatorcontrib><creatorcontrib>Huang, Hong-jia</creatorcontrib><creatorcontrib>Li, Hongye</creatorcontrib><creatorcontrib>Liu, Jiesheng</creatorcontrib><creatorcontrib>Yang, Weidong</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Environment Abstracts</collection><collection>Oceanic Abstracts</collection><collection>Pollution Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 3: Aquatic Pollution & Environmental Quality</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><jtitle>Marine pollution bulletin</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Li, Yue</au><au>Huang, Hong-jia</au><au>Li, Hongye</au><au>Liu, Jiesheng</au><au>Yang, Weidong</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic diversity of Ulva prolifera population in Qingdao coastal water during the green algal blooms revealed by microsatellite</atitle><jtitle>Marine pollution bulletin</jtitle><addtitle>Mar Pollut Bull</addtitle><date>2016-10-15</date><risdate>2016</risdate><volume>111</volume><issue>1-2</issue><spage>237</spage><epage>246</epage><pages>237-246</pages><issn>0025-326X</issn><eissn>1879-3363</eissn><abstract>Green tides have occurred in Qingdao coast in China for seven consecutive years from 2007 to 2013. To provide information on the genetic structure of these blooms, 210 free-floating green algae samples isolated from the green tide in Qingdao coast on June 19, 2013 were identified based on the ITS, rbcL and 5S sequence, and genetic diversity was investigated by microsatellite markers. According to ITS, rbcL and 5S sequence, all the 210 samples belonged to Ulva prolifera. Nei's genetic diversity and Shannon index estimated using eight microsatellite markers indicated that the genetic diversity of U. prolifera population within Qingdao's green bloom in 2013 was low. Taking into account previous reports about life history and physiology of U. prolifera, we proposed that the limited origin area of the free-floating biomass and asexual reproduction of U. prolifera might be responsible for the lower diversity of free floating U. prolifera.
•Genetic diversity of Ulva prolifera population was investigated by microsatellite.•The green tide in Qingdao sea area in 2013 was dominated by a single species.•Genetic diversity of U. prolifera population within Qingdao's green bloom is low.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>27412412</pmid><doi>10.1016/j.marpolbul.2016.07.001</doi><tpages>10</tpages></addata></record> |
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| subjects | algal blooms asexual reproduction Biomass China coastal water coasts Diversity Eutrophication genetic markers Genetic Variation Green tide internal transcribed spacers life history Marine Microsatellite Microsatellite Repeats Oceans and Seas Population Ulva Ulva - genetics Ulva - physiology Ulva prolifera water pollution |
| title | Genetic diversity of Ulva prolifera population in Qingdao coastal water during the green algal blooms revealed by microsatellite |
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