New insight into cofactor-free oxygenation from combined experimental and computational approaches
[Display omitted] •Some oxygenases (and oxidases) do not require metals and/or organic cofactors for catalysis.•α/β-Hydrolase fold bacterial cofactor-free 2,4-dioxygenases rely on a His-Asp catalytic dyad for substrate deprotonation/activation.•A mechanism of direct O2 attack rather than charge tran...
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Veröffentlicht in: | Current opinion in structural biology 2016-12, Vol.41, p.109-118 |
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Hauptverfasser: | , |
Format: | Artikel |
Sprache: | eng |
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Online-Zugang: | Volltext |
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Zusammenfassung: | [Display omitted]
•Some oxygenases (and oxidases) do not require metals and/or organic cofactors for catalysis.•α/β-Hydrolase fold bacterial cofactor-free 2,4-dioxygenases rely on a His-Asp catalytic dyad for substrate deprotonation/activation.•A mechanism of direct O2 attack rather than charge transfer might be employed by these enzymes to generate a peroxide intermediate.•An enzyme–peroxide intermediate complex and an in situ-generated enzyme–substrate–O2 complex have been trapped.
Molecular oxygen (O2), in spite being a potentially strong oxidant, typically displays very poor reactivity with organic molecules. This is largely due to quantum chemical reasons as O2 in its ground state is a diradical (3O2) whilst common organic substrates are in a singlet state. For this reason catalysis involving O2 as a reactant is typically mediated by enzymes containing redox metal and/or organic co-factors. Cofactor-independent oxygenases (and oxidases) are therefore intriguing enzymes from a fundamental viewpoint. This review looks at recent advances that have been made in understanding of this class of intriguing biocatalysts highlighting the power of an inter-disciplinary approach involving structural biology, spectroscopy and theoretical methods. |
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ISSN: | 0959-440X 1879-033X |
DOI: | 10.1016/j.sbi.2016.06.015 |