The peculiarities of piRNA expression upon heat shock exposure in Drosophila melanogaster
Different types of stress including heat shock may induce genomic instability, due to the derepression and amplification of mobile elements (MEs). It remains unclear, however, whether piRNA-machinery regulating ME expression functions normally under stressful conditions. The aim of this study was to...
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Veröffentlicht in: | Mobile genetic elements 2015-09, Vol.5 (5), p.72-80 |
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description | Different types of stress including heat shock may induce genomic instability, due to the derepression and amplification of mobile elements (MEs). It remains unclear, however, whether piRNA-machinery regulating ME expression functions normally under stressful conditions. The aim of this study was to explore the features of piRNA expression after heat shock (HS) exposure in Drosophila melanogaster. We also evaluated functioning of piRNA-machinery in the absence of major stress protein Hsp70 in this species. We analyzed the deep sequence data of piRNA expression after HS treatment and demonstrated that it modulates the expression of certain double-stranded germinal piRNA-clusters. Notable, we demonstrated significant changes in piRNA levels targeting a group of MEs after HS only in the strain containing normal set of hsp70 genes. Surprisingly, we failed to detect any correlation between the levels of piRNAs and the transcription of complementary MEs in the studied strains. We propose that modulation of certain piRNA-clusters expression upon HS exposure in D. melanogaster occurs due to HS-induced altering of chromatin state at certain chromosome regions. |
doi_str_mv | 10.1080/2159256X.2015.1086502 |
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It remains unclear, however, whether piRNA-machinery regulating ME expression functions normally under stressful conditions. The aim of this study was to explore the features of piRNA expression after heat shock (HS) exposure in Drosophila melanogaster. We also evaluated functioning of piRNA-machinery in the absence of major stress protein Hsp70 in this species. We analyzed the deep sequence data of piRNA expression after HS treatment and demonstrated that it modulates the expression of certain double-stranded germinal piRNA-clusters. Notable, we demonstrated significant changes in piRNA levels targeting a group of MEs after HS only in the strain containing normal set of hsp70 genes. Surprisingly, we failed to detect any correlation between the levels of piRNAs and the transcription of complementary MEs in the studied strains. We propose that modulation of certain piRNA-clusters expression upon HS exposure in D. melanogaster occurs due to HS-induced altering of chromatin state at certain chromosome regions.</description><identifier>ISSN: 2159-2543</identifier><identifier>ISSN: 2159-256X</identifier><identifier>EISSN: 2159-256X</identifier><identifier>DOI: 10.1080/2159256X.2015.1086502</identifier><identifier>PMID: 26904377</identifier><language>eng</language><publisher>United States: Taylor & Francis</publisher><subject>Drosophila melanogaster ; heat shock ; hsp70 ; mobile elements ; piRNA ; Research Paper ; stress</subject><ispartof>Mobile genetic elements, 2015-09, Vol.5 (5), p.72-80</ispartof><rights>2015 Taylor & Francis Group, LLC 2015</rights><rights>2015 Taylor & Francis Group, LLC 2015 Taylor & Francis Group, LLC</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c336t-b14b14fe977b11244fa14652f11c77b49dafecda7412a910a3fd51432ad69c233</citedby><cites>FETCH-LOGICAL-c336t-b14b14fe977b11244fa14652f11c77b49dafecda7412a910a3fd51432ad69c233</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4743709/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4743709/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26904377$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Funikov, S Yu</creatorcontrib><creatorcontrib>Ryazansky, SS</creatorcontrib><creatorcontrib>Zelentsova, ES</creatorcontrib><creatorcontrib>Popenko, VI</creatorcontrib><creatorcontrib>Leonova, OG</creatorcontrib><creatorcontrib>Garbuz, DG</creatorcontrib><creatorcontrib>Evgen'ev, MB</creatorcontrib><creatorcontrib>Zatsepina, OG</creatorcontrib><title>The peculiarities of piRNA expression upon heat shock exposure in Drosophila melanogaster</title><title>Mobile genetic elements</title><addtitle>Mob Genet Elements</addtitle><description>Different types of stress including heat shock may induce genomic instability, due to the derepression and amplification of mobile elements (MEs). It remains unclear, however, whether piRNA-machinery regulating ME expression functions normally under stressful conditions. The aim of this study was to explore the features of piRNA expression after heat shock (HS) exposure in Drosophila melanogaster. We also evaluated functioning of piRNA-machinery in the absence of major stress protein Hsp70 in this species. We analyzed the deep sequence data of piRNA expression after HS treatment and demonstrated that it modulates the expression of certain double-stranded germinal piRNA-clusters. Notable, we demonstrated significant changes in piRNA levels targeting a group of MEs after HS only in the strain containing normal set of hsp70 genes. Surprisingly, we failed to detect any correlation between the levels of piRNAs and the transcription of complementary MEs in the studied strains. We propose that modulation of certain piRNA-clusters expression upon HS exposure in D. melanogaster occurs due to HS-induced altering of chromatin state at certain chromosome regions.</description><subject>Drosophila melanogaster</subject><subject>heat shock</subject><subject>hsp70</subject><subject>mobile elements</subject><subject>piRNA</subject><subject>Research Paper</subject><subject>stress</subject><issn>2159-2543</issn><issn>2159-256X</issn><issn>2159-256X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNp9UU1P3DAQtVArQMBPKPKxl6X-TDYXVASUVkIgISq1J2vWGRNDEqd2QuHf19Euq_ZSy_JYb9688fgR8oGzE86W7JPguhK6-HEiGNczVGgmdsj-jC_mxLvtXck9cpTSI8tLq6UQ5S7ZE0XFlCzLffLzvkE6oJ1aD9GPHhMNjg7-7uaM4ssQMSUfejoN-WgQRpqaYJ_mVEhTROp7ehFDCkPjW6AdttCHB0gjxkPy3kGb8GgTD8j3L5f3518X17dX387PrhdWymJcrLjK22FVlivOhVIOuCq0cJzbDKmqBoe2hlJxARVnIF2tuZIC6qKyQsoDcrrWHaZVh7XFfozQmiH6DuKrCeDNv5neN-YhPBtV5i9gVRb4uBGI4deEaTSdTxbbPAqGKRm-FEWhl6XmmarXVJtnThHdtg1nZnbGvDljZmfMxplcd_z3G7dVbz5kwuc1wfcuxA5-h9jWZoTXNkQXobc-Gfn_Hn8ACxyfgA</recordid><startdate>20150903</startdate><enddate>20150903</enddate><creator>Funikov, S Yu</creator><creator>Ryazansky, SS</creator><creator>Zelentsova, ES</creator><creator>Popenko, VI</creator><creator>Leonova, OG</creator><creator>Garbuz, DG</creator><creator>Evgen'ev, MB</creator><creator>Zatsepina, OG</creator><general>Taylor & Francis</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20150903</creationdate><title>The peculiarities of piRNA expression upon heat shock exposure in Drosophila melanogaster</title><author>Funikov, S Yu ; Ryazansky, SS ; Zelentsova, ES ; Popenko, VI ; Leonova, OG ; Garbuz, DG ; Evgen'ev, MB ; Zatsepina, OG</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c336t-b14b14fe977b11244fa14652f11c77b49dafecda7412a910a3fd51432ad69c233</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Drosophila melanogaster</topic><topic>heat shock</topic><topic>hsp70</topic><topic>mobile elements</topic><topic>piRNA</topic><topic>Research Paper</topic><topic>stress</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Funikov, S Yu</creatorcontrib><creatorcontrib>Ryazansky, SS</creatorcontrib><creatorcontrib>Zelentsova, ES</creatorcontrib><creatorcontrib>Popenko, VI</creatorcontrib><creatorcontrib>Leonova, OG</creatorcontrib><creatorcontrib>Garbuz, DG</creatorcontrib><creatorcontrib>Evgen'ev, MB</creatorcontrib><creatorcontrib>Zatsepina, OG</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Mobile genetic elements</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Funikov, S Yu</au><au>Ryazansky, SS</au><au>Zelentsova, ES</au><au>Popenko, VI</au><au>Leonova, OG</au><au>Garbuz, DG</au><au>Evgen'ev, MB</au><au>Zatsepina, OG</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The peculiarities of piRNA expression upon heat shock exposure in Drosophila melanogaster</atitle><jtitle>Mobile genetic elements</jtitle><addtitle>Mob Genet Elements</addtitle><date>2015-09-03</date><risdate>2015</risdate><volume>5</volume><issue>5</issue><spage>72</spage><epage>80</epage><pages>72-80</pages><issn>2159-2543</issn><issn>2159-256X</issn><eissn>2159-256X</eissn><abstract>Different types of stress including heat shock may induce genomic instability, due to the derepression and amplification of mobile elements (MEs). It remains unclear, however, whether piRNA-machinery regulating ME expression functions normally under stressful conditions. The aim of this study was to explore the features of piRNA expression after heat shock (HS) exposure in Drosophila melanogaster. We also evaluated functioning of piRNA-machinery in the absence of major stress protein Hsp70 in this species. We analyzed the deep sequence data of piRNA expression after HS treatment and demonstrated that it modulates the expression of certain double-stranded germinal piRNA-clusters. Notable, we demonstrated significant changes in piRNA levels targeting a group of MEs after HS only in the strain containing normal set of hsp70 genes. Surprisingly, we failed to detect any correlation between the levels of piRNAs and the transcription of complementary MEs in the studied strains. We propose that modulation of certain piRNA-clusters expression upon HS exposure in D. melanogaster occurs due to HS-induced altering of chromatin state at certain chromosome regions.</abstract><cop>United States</cop><pub>Taylor & Francis</pub><pmid>26904377</pmid><doi>10.1080/2159256X.2015.1086502</doi><tpages>9</tpages></addata></record> |
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title | The peculiarities of piRNA expression upon heat shock exposure in Drosophila melanogaster |
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