THI1, a protein involved in the biosynthesis of thiamin in Arabidopsis thaliana: Structural analysis of THI1(A140V) mutant
In eukaryotes, there are still steps of the vitamin B1 biosynthetic pathway not completely understood. In Arabidopsis thaliana, THI1 protein has been associated with the synthesis of the thiazole ring, a finding supported by the identification of a thiamine pyrophosphate (TPP)-like compound in its s...
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description | In eukaryotes, there are still steps of the vitamin B1 biosynthetic pathway not completely understood. In Arabidopsis thaliana, THI1 protein has been associated with the synthesis of the thiazole ring, a finding supported by the identification of a thiamine pyrophosphate (TPP)-like compound in its structure. Here, we investigated THI1 and its mutant THI1(A140V), responsible for the thiamin auxotrophy in a A. thaliana mutant line, aiming to clarify the impact of this mutation in the stability and activity of THI1. Recently, the THI1 orthologue (THI4) was revealed to be responsible for the donation of the sulfur atom from a cysteine residue to the thiazole ring in the thiamine intermediate. In this context, we carried out a cysteine quantification in THI1 and THI1(A140V) using electron spin resonance (ESR). These data showed that THI1(A140V) contains more sulfur-containing cysteines than THI1, indicating that the function as a sulfur donor is conserved, but the rate of donation reaction is somehow affected. Also, the bound compounds were isolated from both proteins and are present in different amounts in each protein. Unfolding studies presented differences in melting temperatures and also in the concentration of guanidine at which half of the protein unfolds, thus showing that THI1(A140V) has its conformational stability affected by the mutation. Hence, despite keeping its function in the early steps during the synthesis of TPP precursor, our studies have shown a decrease in the THI1(A140V) stability, which might be slowing down the biological activity of the mutant, and thus contributing to thiamin auxotrophy.
•The point mutation (A140V) has no significant effect on the THI1 quaternary structure.•Unfolding studies showed that conformational stability of THI1(A140V) is affected.•ESR and NMR data revealed that THI1(A140V) possesses catalytic activity.•Changes on overall THI1(A140V) structure affect the thiazole biosynthesis. |
doi_str_mv | 10.1016/j.bbapap.2014.03.005 |
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•The point mutation (A140V) has no significant effect on the THI1 quaternary structure.•Unfolding studies showed that conformational stability of THI1(A140V) is affected.•ESR and NMR data revealed that THI1(A140V) possesses catalytic activity.•Changes on overall THI1(A140V) structure affect the thiazole biosynthesis.</description><identifier>ISSN: 1570-9639</identifier><identifier>ISSN: 0006-3002</identifier><identifier>EISSN: 1878-1454</identifier><identifier>DOI: 10.1016/j.bbapap.2014.03.005</identifier><identifier>PMID: 24637331</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Alanine - chemistry ; Alanine - metabolism ; Arabidopsis - chemistry ; Arabidopsis - genetics ; Arabidopsis - metabolism ; Arabidopsis Proteins - chemistry ; Arabidopsis Proteins - genetics ; Arabidopsis Proteins - metabolism ; Arabidopsis thaliana ; Circular dichroism ; Cysteine - chemistry ; Cysteine - metabolism ; Electron Spin Resonance Spectroscopy ; Escherichia coli - genetics ; Escherichia coli - metabolism ; Fluorescence ; Gene Expression ; Isoenzymes - chemistry ; Isoenzymes - genetics ; Isoenzymes - metabolism ; Kinetics ; Mutation ; Protein Stability ; Protein Unfolding ; Recombinant Proteins - chemistry ; Recombinant Proteins - genetics ; Recombinant Proteins - metabolism ; Thermodynamics ; Thiamine - biosynthesis ; Thiamine pyrophosphate (TPP) ; Thiamine Pyrophosphate - chemistry ; Thiamine Pyrophosphate - metabolism ; Thiazole synthase (THI1) ; Valine - chemistry ; Valine - metabolism</subject><ispartof>Biochimica et biophysica acta, 2014-06, Vol.1844 (6), p.1094-1103</ispartof><rights>2014 Elsevier B.V.</rights><rights>Copyright © 2014 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c395t-b046615add96e3ee4a7a12044001b8bcb958c9ef455e04d2a44c627b10b9b4ef3</citedby><cites>FETCH-LOGICAL-c395t-b046615add96e3ee4a7a12044001b8bcb958c9ef455e04d2a44c627b10b9b4ef3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.bbapap.2014.03.005$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24637331$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Garcia, Assuero F.</creatorcontrib><creatorcontrib>Dyszy, Fabio</creatorcontrib><creatorcontrib>Munte, Claudia E.</creatorcontrib><creatorcontrib>DeMarco, Ricardo</creatorcontrib><creatorcontrib>Beltramini, Leila M.</creatorcontrib><creatorcontrib>Oliva, Glaucius</creatorcontrib><creatorcontrib>Costa-Filho, Antonio J.</creatorcontrib><creatorcontrib>Araujo, Ana P.U.</creatorcontrib><title>THI1, a protein involved in the biosynthesis of thiamin in Arabidopsis thaliana: Structural analysis of THI1(A140V) mutant</title><title>Biochimica et biophysica acta</title><addtitle>Biochim Biophys Acta</addtitle><description>In eukaryotes, there are still steps of the vitamin B1 biosynthetic pathway not completely understood. In Arabidopsis thaliana, THI1 protein has been associated with the synthesis of the thiazole ring, a finding supported by the identification of a thiamine pyrophosphate (TPP)-like compound in its structure. Here, we investigated THI1 and its mutant THI1(A140V), responsible for the thiamin auxotrophy in a A. thaliana mutant line, aiming to clarify the impact of this mutation in the stability and activity of THI1. Recently, the THI1 orthologue (THI4) was revealed to be responsible for the donation of the sulfur atom from a cysteine residue to the thiazole ring in the thiamine intermediate. In this context, we carried out a cysteine quantification in THI1 and THI1(A140V) using electron spin resonance (ESR). These data showed that THI1(A140V) contains more sulfur-containing cysteines than THI1, indicating that the function as a sulfur donor is conserved, but the rate of donation reaction is somehow affected. Also, the bound compounds were isolated from both proteins and are present in different amounts in each protein. Unfolding studies presented differences in melting temperatures and also in the concentration of guanidine at which half of the protein unfolds, thus showing that THI1(A140V) has its conformational stability affected by the mutation. Hence, despite keeping its function in the early steps during the synthesis of TPP precursor, our studies have shown a decrease in the THI1(A140V) stability, which might be slowing down the biological activity of the mutant, and thus contributing to thiamin auxotrophy.
•The point mutation (A140V) has no significant effect on the THI1 quaternary structure.•Unfolding studies showed that conformational stability of THI1(A140V) is affected.•ESR and NMR data revealed that THI1(A140V) possesses catalytic activity.•Changes on overall THI1(A140V) structure affect the thiazole biosynthesis.</description><subject>Alanine - chemistry</subject><subject>Alanine - metabolism</subject><subject>Arabidopsis - chemistry</subject><subject>Arabidopsis - genetics</subject><subject>Arabidopsis - metabolism</subject><subject>Arabidopsis Proteins - chemistry</subject><subject>Arabidopsis Proteins - genetics</subject><subject>Arabidopsis Proteins - metabolism</subject><subject>Arabidopsis thaliana</subject><subject>Circular dichroism</subject><subject>Cysteine - chemistry</subject><subject>Cysteine - metabolism</subject><subject>Electron Spin Resonance Spectroscopy</subject><subject>Escherichia coli - genetics</subject><subject>Escherichia coli - metabolism</subject><subject>Fluorescence</subject><subject>Gene Expression</subject><subject>Isoenzymes - chemistry</subject><subject>Isoenzymes - genetics</subject><subject>Isoenzymes - metabolism</subject><subject>Kinetics</subject><subject>Mutation</subject><subject>Protein Stability</subject><subject>Protein Unfolding</subject><subject>Recombinant Proteins - chemistry</subject><subject>Recombinant Proteins - genetics</subject><subject>Recombinant Proteins - metabolism</subject><subject>Thermodynamics</subject><subject>Thiamine - biosynthesis</subject><subject>Thiamine pyrophosphate (TPP)</subject><subject>Thiamine Pyrophosphate - chemistry</subject><subject>Thiamine Pyrophosphate - metabolism</subject><subject>Thiazole synthase (THI1)</subject><subject>Valine - chemistry</subject><subject>Valine - metabolism</subject><issn>1570-9639</issn><issn>0006-3002</issn><issn>1878-1454</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkUtv1DAUhSMEog_4Bwh5WSSSXsd2ErOoNKoorVSJBYWtZTs3qkd5YTsjDb8epzOwbFc-tr9zj-yTZR8oFBRodbktjNGznosSKC-AFQDiVXZKm7rJKRf8ddKihlxWTJ5kZyFsAUqoa_E2Oyl5xWrG6Gn25-H2jn4mmsx-iuhG4sbd1O-wTYLERyTGTWE_JhVcIFOXzpwenjiy8dq4dprXm_ioe6dH_YX8iH6xcfG6J2nf74--NediQzn8-kSGJeoxvsvedLoP-P64nmc_b74-XN_m99-_3V1v7nPLpIi5AV5VVOi2lRUyRK5rTUvgHICaxlgjRWMldlwIBN6WmnNblbWhYKTh2LHz7OIwNz3x94IhqsEFi32vR5yWoGhTMskrLsuXUUFlw2oBK8oPqPVTCB47NXs3aL9XFNRakNqqQ0FqLUgBU6mgZPt4TFjMgO1_079GEnB1ADB9yc6hV8E6HC22zqONqp3c8wl_Aco3olo</recordid><startdate>20140601</startdate><enddate>20140601</enddate><creator>Garcia, Assuero F.</creator><creator>Dyszy, Fabio</creator><creator>Munte, Claudia E.</creator><creator>DeMarco, Ricardo</creator><creator>Beltramini, Leila M.</creator><creator>Oliva, Glaucius</creator><creator>Costa-Filho, Antonio J.</creator><creator>Araujo, Ana P.U.</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QO</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope></search><sort><creationdate>20140601</creationdate><title>THI1, a protein involved in the biosynthesis of thiamin in Arabidopsis thaliana: Structural analysis of THI1(A140V) mutant</title><author>Garcia, Assuero F. ; Dyszy, Fabio ; Munte, Claudia E. ; DeMarco, Ricardo ; Beltramini, Leila M. ; Oliva, Glaucius ; Costa-Filho, Antonio J. ; Araujo, Ana P.U.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c395t-b046615add96e3ee4a7a12044001b8bcb958c9ef455e04d2a44c627b10b9b4ef3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Alanine - chemistry</topic><topic>Alanine - metabolism</topic><topic>Arabidopsis - chemistry</topic><topic>Arabidopsis - genetics</topic><topic>Arabidopsis - metabolism</topic><topic>Arabidopsis Proteins - chemistry</topic><topic>Arabidopsis Proteins - genetics</topic><topic>Arabidopsis Proteins - metabolism</topic><topic>Arabidopsis thaliana</topic><topic>Circular dichroism</topic><topic>Cysteine - chemistry</topic><topic>Cysteine - metabolism</topic><topic>Electron Spin Resonance Spectroscopy</topic><topic>Escherichia coli - genetics</topic><topic>Escherichia coli - metabolism</topic><topic>Fluorescence</topic><topic>Gene Expression</topic><topic>Isoenzymes - chemistry</topic><topic>Isoenzymes - genetics</topic><topic>Isoenzymes - metabolism</topic><topic>Kinetics</topic><topic>Mutation</topic><topic>Protein Stability</topic><topic>Protein Unfolding</topic><topic>Recombinant Proteins - chemistry</topic><topic>Recombinant Proteins - genetics</topic><topic>Recombinant Proteins - metabolism</topic><topic>Thermodynamics</topic><topic>Thiamine - biosynthesis</topic><topic>Thiamine pyrophosphate (TPP)</topic><topic>Thiamine Pyrophosphate - chemistry</topic><topic>Thiamine Pyrophosphate - metabolism</topic><topic>Thiazole synthase (THI1)</topic><topic>Valine - chemistry</topic><topic>Valine - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Garcia, Assuero F.</creatorcontrib><creatorcontrib>Dyszy, Fabio</creatorcontrib><creatorcontrib>Munte, Claudia E.</creatorcontrib><creatorcontrib>DeMarco, Ricardo</creatorcontrib><creatorcontrib>Beltramini, Leila M.</creatorcontrib><creatorcontrib>Oliva, Glaucius</creatorcontrib><creatorcontrib>Costa-Filho, Antonio J.</creatorcontrib><creatorcontrib>Araujo, Ana P.U.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Biochimica et biophysica acta</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Garcia, Assuero F.</au><au>Dyszy, Fabio</au><au>Munte, Claudia E.</au><au>DeMarco, Ricardo</au><au>Beltramini, Leila M.</au><au>Oliva, Glaucius</au><au>Costa-Filho, Antonio J.</au><au>Araujo, Ana P.U.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>THI1, a protein involved in the biosynthesis of thiamin in Arabidopsis thaliana: Structural analysis of THI1(A140V) mutant</atitle><jtitle>Biochimica et biophysica acta</jtitle><addtitle>Biochim Biophys Acta</addtitle><date>2014-06-01</date><risdate>2014</risdate><volume>1844</volume><issue>6</issue><spage>1094</spage><epage>1103</epage><pages>1094-1103</pages><issn>1570-9639</issn><issn>0006-3002</issn><eissn>1878-1454</eissn><abstract>In eukaryotes, there are still steps of the vitamin B1 biosynthetic pathway not completely understood. In Arabidopsis thaliana, THI1 protein has been associated with the synthesis of the thiazole ring, a finding supported by the identification of a thiamine pyrophosphate (TPP)-like compound in its structure. Here, we investigated THI1 and its mutant THI1(A140V), responsible for the thiamin auxotrophy in a A. thaliana mutant line, aiming to clarify the impact of this mutation in the stability and activity of THI1. Recently, the THI1 orthologue (THI4) was revealed to be responsible for the donation of the sulfur atom from a cysteine residue to the thiazole ring in the thiamine intermediate. In this context, we carried out a cysteine quantification in THI1 and THI1(A140V) using electron spin resonance (ESR). These data showed that THI1(A140V) contains more sulfur-containing cysteines than THI1, indicating that the function as a sulfur donor is conserved, but the rate of donation reaction is somehow affected. Also, the bound compounds were isolated from both proteins and are present in different amounts in each protein. Unfolding studies presented differences in melting temperatures and also in the concentration of guanidine at which half of the protein unfolds, thus showing that THI1(A140V) has its conformational stability affected by the mutation. Hence, despite keeping its function in the early steps during the synthesis of TPP precursor, our studies have shown a decrease in the THI1(A140V) stability, which might be slowing down the biological activity of the mutant, and thus contributing to thiamin auxotrophy.
•The point mutation (A140V) has no significant effect on the THI1 quaternary structure.•Unfolding studies showed that conformational stability of THI1(A140V) is affected.•ESR and NMR data revealed that THI1(A140V) possesses catalytic activity.•Changes on overall THI1(A140V) structure affect the thiazole biosynthesis.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>24637331</pmid><doi>10.1016/j.bbapap.2014.03.005</doi><tpages>10</tpages></addata></record> |
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subjects | Alanine - chemistry Alanine - metabolism Arabidopsis - chemistry Arabidopsis - genetics Arabidopsis - metabolism Arabidopsis Proteins - chemistry Arabidopsis Proteins - genetics Arabidopsis Proteins - metabolism Arabidopsis thaliana Circular dichroism Cysteine - chemistry Cysteine - metabolism Electron Spin Resonance Spectroscopy Escherichia coli - genetics Escherichia coli - metabolism Fluorescence Gene Expression Isoenzymes - chemistry Isoenzymes - genetics Isoenzymes - metabolism Kinetics Mutation Protein Stability Protein Unfolding Recombinant Proteins - chemistry Recombinant Proteins - genetics Recombinant Proteins - metabolism Thermodynamics Thiamine - biosynthesis Thiamine pyrophosphate (TPP) Thiamine Pyrophosphate - chemistry Thiamine Pyrophosphate - metabolism Thiazole synthase (THI1) Valine - chemistry Valine - metabolism |
title | THI1, a protein involved in the biosynthesis of thiamin in Arabidopsis thaliana: Structural analysis of THI1(A140V) mutant |
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