Simulation of metastatic progression using a computer model including chemotherapy and radiation therapy

[Display omitted] •CaTSiT simulates the progression of tumor growth and metastasis formation.•Various models of cancer growth with diverse characteristics can be simulated.•CaTSiT predicts the impact of treatments on the primary tumor and metastases.•CaTSiT simulates resection of the primary tumor,...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Journal of biomedical informatics 2015-10, Vol.57, p.74-87
Hauptverfasser: Bethge, Anja, Schumacher, Udo, Wedemann, Gero
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 87
container_issue
container_start_page 74
container_title Journal of biomedical informatics
container_volume 57
creator Bethge, Anja
Schumacher, Udo
Wedemann, Gero
description [Display omitted] •CaTSiT simulates the progression of tumor growth and metastasis formation.•Various models of cancer growth with diverse characteristics can be simulated.•CaTSiT predicts the impact of treatments on the primary tumor and metastases.•CaTSiT simulates resection of the primary tumor, chemotherapy and radiation therapy.•CaTSiT is publicly available as open source software under the GPL-3.0 license. Despite considerable research efforts, the process of metastasis formation is still a subject of intense discussion, and even established models differ considerably in basic details and in the conclusions drawn from them. Mathematical and computational models add a new perspective to the research as they can quantitatively investigate the processes of metastasis and the effects of treatment. However, existing models look at only one treatment option at a time. We enhanced a previously developed computer model (called CaTSiT) that enables quantitative comparison of different metastasis formation models with clinical and experimental data, to include the effects of chemotherapy, external beam radiation, radioimmunotherapy and radioembolization. CaTSiT is based on a discrete event simulation procedure. The growth of the primary tumor and its metastases is modeled by a piecewise-defined growth function that describes the growth behavior of the primary tumor and metastases during various time intervals. The piecewise-defined growth function is composed of analytical functions describing the growth behavior of the tumor based on characteristics of the tumor, such as dormancy, or the effects of various therapies. The spreading of malignant cells into the blood is modeled by intravasation events, which are generated according to a rate function. Further events in the model describe the behavior of the released malignant cells until the formation of a new metastasis. The model is published under the GNU General Public License version 3. To demonstrate the application of the computer model, a case of a patient with a hepatocellular carcinoma and multiple metastases in the liver was simulated. Besides the untreated case, different treatments were simulated at two time points: one directly after diagnosis of the primary tumor and the other several months later. Except for early applied radioimmunotherapy, no treatment strategy was able to eliminate all metastases. These results emphasize the importance of early diagnosis and of proceeding with treatment even i
doi_str_mv 10.1016/j.jbi.2015.07.011
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1816077976</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S1532046415001513</els_id><sourcerecordid>1797538213</sourcerecordid><originalsourceid>FETCH-LOGICAL-c419t-dbb8274a641779b246ad8c4d5fbbcdb6dcf7ec3d74da29df16a666c68189de653</originalsourceid><addsrcrecordid>eNqNkbFu2zAQhomgQeK4fYAsAccuVnkSdZLQqTCSNECADElmgiJPNg1JdEmpQN4-NOxmbDvxyPvuB3EfY9cgMhCA33bZrnVZLqDMRJUJgDO2gLLIV0LW4tNHjfKSXcW4E4koS7xglzlCI3LEBds-u2Hu9eT8yH3HB5p0nNLV8H3wm0AxHjpzdOOGa278sJ8nCnzwlnruRtPP9tAyWxr8tKWg929cj5YHbd0x9fT6mZ13uo_05XQu2evd7cv65-rx6f5h_eNxZSQ008q2bZ1XUqOEqmraXKK2tZG27NrW2Bat6Soyha2k1XljO0CNiAZrqBtLWBZL9vWYm_7_a6Y4qcFFQ32vR_JzVFADihRd4b_RRJVFnUPxP6gshZCNSCgcURN8jIE6tQ9u0OFNgVAHbWqnkjZ10KZEpZKUNHNzip_bgezHxB9PCfh-BCit7rejoKJxNBqyLpCZlPXuL_HvC96p9w</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1794500490</pqid></control><display><type>article</type><title>Simulation of metastatic progression using a computer model including chemotherapy and radiation therapy</title><source>MEDLINE</source><source>Elsevier ScienceDirect Journals</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><creator>Bethge, Anja ; Schumacher, Udo ; Wedemann, Gero</creator><creatorcontrib>Bethge, Anja ; Schumacher, Udo ; Wedemann, Gero</creatorcontrib><description>[Display omitted] •CaTSiT simulates the progression of tumor growth and metastasis formation.•Various models of cancer growth with diverse characteristics can be simulated.•CaTSiT predicts the impact of treatments on the primary tumor and metastases.•CaTSiT simulates resection of the primary tumor, chemotherapy and radiation therapy.•CaTSiT is publicly available as open source software under the GPL-3.0 license. Despite considerable research efforts, the process of metastasis formation is still a subject of intense discussion, and even established models differ considerably in basic details and in the conclusions drawn from them. Mathematical and computational models add a new perspective to the research as they can quantitatively investigate the processes of metastasis and the effects of treatment. However, existing models look at only one treatment option at a time. We enhanced a previously developed computer model (called CaTSiT) that enables quantitative comparison of different metastasis formation models with clinical and experimental data, to include the effects of chemotherapy, external beam radiation, radioimmunotherapy and radioembolization. CaTSiT is based on a discrete event simulation procedure. The growth of the primary tumor and its metastases is modeled by a piecewise-defined growth function that describes the growth behavior of the primary tumor and metastases during various time intervals. The piecewise-defined growth function is composed of analytical functions describing the growth behavior of the tumor based on characteristics of the tumor, such as dormancy, or the effects of various therapies. The spreading of malignant cells into the blood is modeled by intravasation events, which are generated according to a rate function. Further events in the model describe the behavior of the released malignant cells until the formation of a new metastasis. The model is published under the GNU General Public License version 3. To demonstrate the application of the computer model, a case of a patient with a hepatocellular carcinoma and multiple metastases in the liver was simulated. Besides the untreated case, different treatments were simulated at two time points: one directly after diagnosis of the primary tumor and the other several months later. Except for early applied radioimmunotherapy, no treatment strategy was able to eliminate all metastases. These results emphasize the importance of early diagnosis and of proceeding with treatment even if no clinically detectable metastases are present at the time of diagnosis of the primary tumor. CaTSiT could be a valuable tool for quantitative investigation of the process of tumor growth and metastasis formation, including the effects of various treatment options.</description><identifier>ISSN: 1532-0464</identifier><identifier>EISSN: 1532-0480</identifier><identifier>DOI: 10.1016/j.jbi.2015.07.011</identifier><identifier>PMID: 26190266</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Carcinoma, Hepatocellular - pathology ; Carcinoma, Hepatocellular - therapy ; Chemotherapy ; Combined Modality Therapy ; Computer Simulation ; Diagnosis ; Disease Progression ; Formations ; Humans ; Licenses ; Liver Neoplasms - therapy ; Mathematical analysis ; Mathematical models ; Metastasis ; Neoplasm Metastasis ; Radioembolization ; Radioimmunotherapy ; Radiotherapy ; Tumors</subject><ispartof>Journal of biomedical informatics, 2015-10, Vol.57, p.74-87</ispartof><rights>2015 Elsevier Inc.</rights><rights>Copyright © 2015 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c419t-dbb8274a641779b246ad8c4d5fbbcdb6dcf7ec3d74da29df16a666c68189de653</citedby><cites>FETCH-LOGICAL-c419t-dbb8274a641779b246ad8c4d5fbbcdb6dcf7ec3d74da29df16a666c68189de653</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S1532046415001513$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26190266$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bethge, Anja</creatorcontrib><creatorcontrib>Schumacher, Udo</creatorcontrib><creatorcontrib>Wedemann, Gero</creatorcontrib><title>Simulation of metastatic progression using a computer model including chemotherapy and radiation therapy</title><title>Journal of biomedical informatics</title><addtitle>J Biomed Inform</addtitle><description>[Display omitted] •CaTSiT simulates the progression of tumor growth and metastasis formation.•Various models of cancer growth with diverse characteristics can be simulated.•CaTSiT predicts the impact of treatments on the primary tumor and metastases.•CaTSiT simulates resection of the primary tumor, chemotherapy and radiation therapy.•CaTSiT is publicly available as open source software under the GPL-3.0 license. Despite considerable research efforts, the process of metastasis formation is still a subject of intense discussion, and even established models differ considerably in basic details and in the conclusions drawn from them. Mathematical and computational models add a new perspective to the research as they can quantitatively investigate the processes of metastasis and the effects of treatment. However, existing models look at only one treatment option at a time. We enhanced a previously developed computer model (called CaTSiT) that enables quantitative comparison of different metastasis formation models with clinical and experimental data, to include the effects of chemotherapy, external beam radiation, radioimmunotherapy and radioembolization. CaTSiT is based on a discrete event simulation procedure. The growth of the primary tumor and its metastases is modeled by a piecewise-defined growth function that describes the growth behavior of the primary tumor and metastases during various time intervals. The piecewise-defined growth function is composed of analytical functions describing the growth behavior of the tumor based on characteristics of the tumor, such as dormancy, or the effects of various therapies. The spreading of malignant cells into the blood is modeled by intravasation events, which are generated according to a rate function. Further events in the model describe the behavior of the released malignant cells until the formation of a new metastasis. The model is published under the GNU General Public License version 3. To demonstrate the application of the computer model, a case of a patient with a hepatocellular carcinoma and multiple metastases in the liver was simulated. Besides the untreated case, different treatments were simulated at two time points: one directly after diagnosis of the primary tumor and the other several months later. Except for early applied radioimmunotherapy, no treatment strategy was able to eliminate all metastases. These results emphasize the importance of early diagnosis and of proceeding with treatment even if no clinically detectable metastases are present at the time of diagnosis of the primary tumor. CaTSiT could be a valuable tool for quantitative investigation of the process of tumor growth and metastasis formation, including the effects of various treatment options.</description><subject>Carcinoma, Hepatocellular - pathology</subject><subject>Carcinoma, Hepatocellular - therapy</subject><subject>Chemotherapy</subject><subject>Combined Modality Therapy</subject><subject>Computer Simulation</subject><subject>Diagnosis</subject><subject>Disease Progression</subject><subject>Formations</subject><subject>Humans</subject><subject>Licenses</subject><subject>Liver Neoplasms - therapy</subject><subject>Mathematical analysis</subject><subject>Mathematical models</subject><subject>Metastasis</subject><subject>Neoplasm Metastasis</subject><subject>Radioembolization</subject><subject>Radioimmunotherapy</subject><subject>Radiotherapy</subject><subject>Tumors</subject><issn>1532-0464</issn><issn>1532-0480</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkbFu2zAQhomgQeK4fYAsAccuVnkSdZLQqTCSNECADElmgiJPNg1JdEmpQN4-NOxmbDvxyPvuB3EfY9cgMhCA33bZrnVZLqDMRJUJgDO2gLLIV0LW4tNHjfKSXcW4E4koS7xglzlCI3LEBds-u2Hu9eT8yH3HB5p0nNLV8H3wm0AxHjpzdOOGa278sJ8nCnzwlnruRtPP9tAyWxr8tKWg929cj5YHbd0x9fT6mZ13uo_05XQu2evd7cv65-rx6f5h_eNxZSQ008q2bZ1XUqOEqmraXKK2tZG27NrW2Bat6Soyha2k1XljO0CNiAZrqBtLWBZL9vWYm_7_a6Y4qcFFQ32vR_JzVFADihRd4b_RRJVFnUPxP6gshZCNSCgcURN8jIE6tQ9u0OFNgVAHbWqnkjZ10KZEpZKUNHNzip_bgezHxB9PCfh-BCit7rejoKJxNBqyLpCZlPXuL_HvC96p9w</recordid><startdate>201510</startdate><enddate>201510</enddate><creator>Bethge, Anja</creator><creator>Schumacher, Udo</creator><creator>Wedemann, Gero</creator><general>Elsevier Inc</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>7X8</scope><scope>7SC</scope><scope>JQ2</scope><scope>KR7</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope></search><sort><creationdate>201510</creationdate><title>Simulation of metastatic progression using a computer model including chemotherapy and radiation therapy</title><author>Bethge, Anja ; Schumacher, Udo ; Wedemann, Gero</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c419t-dbb8274a641779b246ad8c4d5fbbcdb6dcf7ec3d74da29df16a666c68189de653</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Carcinoma, Hepatocellular - pathology</topic><topic>Carcinoma, Hepatocellular - therapy</topic><topic>Chemotherapy</topic><topic>Combined Modality Therapy</topic><topic>Computer Simulation</topic><topic>Diagnosis</topic><topic>Disease Progression</topic><topic>Formations</topic><topic>Humans</topic><topic>Licenses</topic><topic>Liver Neoplasms - therapy</topic><topic>Mathematical analysis</topic><topic>Mathematical models</topic><topic>Metastasis</topic><topic>Neoplasm Metastasis</topic><topic>Radioembolization</topic><topic>Radioimmunotherapy</topic><topic>Radiotherapy</topic><topic>Tumors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bethge, Anja</creatorcontrib><creatorcontrib>Schumacher, Udo</creatorcontrib><creatorcontrib>Wedemann, Gero</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><collection>Computer and Information Systems Abstracts</collection><collection>ProQuest Computer Science Collection</collection><collection>Civil Engineering Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts – Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><jtitle>Journal of biomedical informatics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bethge, Anja</au><au>Schumacher, Udo</au><au>Wedemann, Gero</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Simulation of metastatic progression using a computer model including chemotherapy and radiation therapy</atitle><jtitle>Journal of biomedical informatics</jtitle><addtitle>J Biomed Inform</addtitle><date>2015-10</date><risdate>2015</risdate><volume>57</volume><spage>74</spage><epage>87</epage><pages>74-87</pages><issn>1532-0464</issn><eissn>1532-0480</eissn><abstract>[Display omitted] •CaTSiT simulates the progression of tumor growth and metastasis formation.•Various models of cancer growth with diverse characteristics can be simulated.•CaTSiT predicts the impact of treatments on the primary tumor and metastases.•CaTSiT simulates resection of the primary tumor, chemotherapy and radiation therapy.•CaTSiT is publicly available as open source software under the GPL-3.0 license. Despite considerable research efforts, the process of metastasis formation is still a subject of intense discussion, and even established models differ considerably in basic details and in the conclusions drawn from them. Mathematical and computational models add a new perspective to the research as they can quantitatively investigate the processes of metastasis and the effects of treatment. However, existing models look at only one treatment option at a time. We enhanced a previously developed computer model (called CaTSiT) that enables quantitative comparison of different metastasis formation models with clinical and experimental data, to include the effects of chemotherapy, external beam radiation, radioimmunotherapy and radioembolization. CaTSiT is based on a discrete event simulation procedure. The growth of the primary tumor and its metastases is modeled by a piecewise-defined growth function that describes the growth behavior of the primary tumor and metastases during various time intervals. The piecewise-defined growth function is composed of analytical functions describing the growth behavior of the tumor based on characteristics of the tumor, such as dormancy, or the effects of various therapies. The spreading of malignant cells into the blood is modeled by intravasation events, which are generated according to a rate function. Further events in the model describe the behavior of the released malignant cells until the formation of a new metastasis. The model is published under the GNU General Public License version 3. To demonstrate the application of the computer model, a case of a patient with a hepatocellular carcinoma and multiple metastases in the liver was simulated. Besides the untreated case, different treatments were simulated at two time points: one directly after diagnosis of the primary tumor and the other several months later. Except for early applied radioimmunotherapy, no treatment strategy was able to eliminate all metastases. These results emphasize the importance of early diagnosis and of proceeding with treatment even if no clinically detectable metastases are present at the time of diagnosis of the primary tumor. CaTSiT could be a valuable tool for quantitative investigation of the process of tumor growth and metastasis formation, including the effects of various treatment options.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>26190266</pmid><doi>10.1016/j.jbi.2015.07.011</doi><tpages>14</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1532-0464
ispartof Journal of biomedical informatics, 2015-10, Vol.57, p.74-87
issn 1532-0464
1532-0480
language eng
recordid cdi_proquest_miscellaneous_1816077976
source MEDLINE; Elsevier ScienceDirect Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals
subjects Carcinoma, Hepatocellular - pathology
Carcinoma, Hepatocellular - therapy
Chemotherapy
Combined Modality Therapy
Computer Simulation
Diagnosis
Disease Progression
Formations
Humans
Licenses
Liver Neoplasms - therapy
Mathematical analysis
Mathematical models
Metastasis
Neoplasm Metastasis
Radioembolization
Radioimmunotherapy
Radiotherapy
Tumors
title Simulation of metastatic progression using a computer model including chemotherapy and radiation therapy
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-12T23%3A31%3A36IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Simulation%20of%20metastatic%20progression%20using%20a%20computer%20model%20including%20chemotherapy%20and%20radiation%20therapy&rft.jtitle=Journal%20of%20biomedical%20informatics&rft.au=Bethge,%20Anja&rft.date=2015-10&rft.volume=57&rft.spage=74&rft.epage=87&rft.pages=74-87&rft.issn=1532-0464&rft.eissn=1532-0480&rft_id=info:doi/10.1016/j.jbi.2015.07.011&rft_dat=%3Cproquest_cross%3E1797538213%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1794500490&rft_id=info:pmid/26190266&rft_els_id=S1532046415001513&rfr_iscdi=true