A novel isolate and widespread abundance of the candidate alphaproteobacterial order (Ellin 329), in southern Appalachian peatlands

Peatlands of all latitudes play an integral role in global climate change by serving as a carbon sink and a primary source of atmospheric methane; however, the microbial ecology of mid-latitude peatlands is vastly understudied. Herein, next generation Illumina amplicon sequencing of small subunit rR...

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Veröffentlicht in:FEMS microbiology letters 2016-08, Vol.363 (15), p.fnw151
Hauptverfasser: Harbison, Austin B., Carson, Michael A., Lamit, Louis J., Basiliko, Nathan, Bräuer, Suzanna L.
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container_issue 15
container_start_page fnw151
container_title FEMS microbiology letters
container_volume 363
creator Harbison, Austin B.
Carson, Michael A.
Lamit, Louis J.
Basiliko, Nathan
Bräuer, Suzanna L.
description Peatlands of all latitudes play an integral role in global climate change by serving as a carbon sink and a primary source of atmospheric methane; however, the microbial ecology of mid-latitude peatlands is vastly understudied. Herein, next generation Illumina amplicon sequencing of small subunit rRNA genes was utilized to elucidate the microbial communities in three southern Appalachian peatlands. In contrast to northern peatlands, Proteobacteria dominated over Acidobacteria in all three sites. An average of 11 bacterial phyla was detected at relative abundance values >1%, with three candidate divisions (OP3, WS3 and NC10) represented, indicating high phylogenetic diversity. Physiological traits of isolates within the candidate alphaproteobacterial order, Ellin 329, obtained here and in previous studies indicate that bacteria of this order may be involved in hydrolysis of poly-, di- and monosaccharides. Community analyses indicate that Ellin 329 is the third most abundant order and is most abundant near the surface layers where plant litter decomposition should be primarily occurring. In sum, members of Ellin 329 likely play important roles in organic matter decomposition, in southern Appalachian peatlands and should be investigated further in other peatlands and ecosystem types. A new order of bacteria, Ellin 329, are abundant in peatlands and may contribute to the decomposition of organic matter and subsequent release of methane to the atmosphere.
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Herein, next generation Illumina amplicon sequencing of small subunit rRNA genes was utilized to elucidate the microbial communities in three southern Appalachian peatlands. In contrast to northern peatlands, Proteobacteria dominated over Acidobacteria in all three sites. An average of 11 bacterial phyla was detected at relative abundance values &gt;1%, with three candidate divisions (OP3, WS3 and NC10) represented, indicating high phylogenetic diversity. Physiological traits of isolates within the candidate alphaproteobacterial order, Ellin 329, obtained here and in previous studies indicate that bacteria of this order may be involved in hydrolysis of poly-, di- and monosaccharides. Community analyses indicate that Ellin 329 is the third most abundant order and is most abundant near the surface layers where plant litter decomposition should be primarily occurring. 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source Oxford University Press Journals All Titles (1996-Current); MEDLINE; Alma/SFX Local Collection
subjects Abundance
Alphaproteobacteria - classification
Alphaproteobacteria - genetics
Alphaproteobacteria - isolation & purification
Alphaproteobacteria - metabolism
Carbon sinks
Climate change
Decomposition
Ecosystem
Genes, rRNA
Global climate
Latitude
Methane - metabolism
Microbial activity
Microbial Consortia
Microbiology
Microorganisms
Monosaccharides
Organic matter
Peatlands
Phylogeny
Relative abundance
rRNA
Soil Microbiology
Surface layers
title A novel isolate and widespread abundance of the candidate alphaproteobacterial order (Ellin 329), in southern Appalachian peatlands
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