Structural Insights into the HWE Histidine Kinase Family: The Brucella Blue Light-Activated Histidine Kinase Domain

In response to light, as part of a two-component system, the Brucella blue light-activated histidine kinase (LOV-HK) increases its autophosphorylation, modulating the virulence of this microorganism. The Brucella histidine kinase (HK) domain belongs to the HWE family, for which there is no structura...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Journal of molecular biology 2016-03, Vol.428 (6), p.1165-1179
Hauptverfasser: Rinaldi, Jimena, Arrar, Mehrnoosh, Sycz, Gabriela, Cerutti, María Laura, Berguer, Paula M., Paris, Gastón, Estrín, Darío Ariel, Martí, Marcelo Adrián, Klinke, Sebastián, Goldbaum, Fernando Alberto
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 1179
container_issue 6
container_start_page 1165
container_title Journal of molecular biology
container_volume 428
creator Rinaldi, Jimena
Arrar, Mehrnoosh
Sycz, Gabriela
Cerutti, María Laura
Berguer, Paula M.
Paris, Gastón
Estrín, Darío Ariel
Martí, Marcelo Adrián
Klinke, Sebastián
Goldbaum, Fernando Alberto
description In response to light, as part of a two-component system, the Brucella blue light-activated histidine kinase (LOV-HK) increases its autophosphorylation, modulating the virulence of this microorganism. The Brucella histidine kinase (HK) domain belongs to the HWE family, for which there is no structural information. The HWE family is exclusively present in proteobacteria and usually coupled to a wide diversity of light sensor domains. This work reports the crystal structure of the Brucella HK domain, which presents two different dimeric assemblies in the asymmetric unit: one similar to the already described canonical parallel homodimers (C) and the other, an antiparallel non-canonical (NC) dimer, each with distinct relative subdomain orientations and dimerization interfaces. Contrary to these crystallographic structures and unlike other HKs, in solution, the Brucella HK domain is monomeric and still active, showing an astonishing instability of the dimeric interface. Despite this instability, using cross-linking experiments, we show that the C dimer is the functionally relevant species. Mutational analysis demonstrates that the autophosphorylation activity occurs in cis. The different relative subdomain orientations observed for the NC and C states highlight the large conformational flexibility of the HK domain. Through the analysis of these alternative conformations by means of molecular dynamics simulations, we also propose a catalytic mechanism for Brucella LOV-HK. [Display omitted] •The crystal structure of the Brucella HK domain reveals two distinct dimers.•In solution, the Brucella HK domain is an active monomer.•The canonical dimer is the functionally relevant species.•The autophosphorylation occurs in cis.•A catalytic mechanism for Brucella LOV-HK is proposed.
doi_str_mv 10.1016/j.jmb.2016.01.026
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1794495026</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S0022283616000814</els_id><sourcerecordid>1779883464</sourcerecordid><originalsourceid>FETCH-LOGICAL-c429t-42643b3701211e398217a7d2668ac113b5a71ff590e7c75d89cdb60ddc9e877f3</originalsourceid><addsrcrecordid>eNqNkUlPHDEUhC2UKAyT_AAukY-5dMdLt5dwYs0gRuIQEEfLbb8Gj3oB243Ev6cnA7lEinJ67_BVqVSF0CElJSVUfN-Um74p2fyWhJaEiT20oETpQgmuPqAFIYwVTHGxjw5S2hBCal6pT2ifCVVTItkCpV85Ti5P0Xb4ckjh_iEnHIY84vwAeHV3jlch5eDDAPgqDDYBvrB96F5-4JsZOJnF0HUWn3QT4PVWXhy7HJ5tBv-39GzsbRg-o4-t7RJ8ebtLdHtxfnO6KtbXPy9Pj9eFq5jORcVExRsuCWWUAteKUWmlZ0Io6yjlTW0lbdtaE5BO1l5p5xtBvHcalJQtX6JvO9_HOD5NkLLpQ_odd4BxSoZKXVW6nnv7D1RqpXg1J1oiukNdHFOK0JrHGHobXwwlZjuL2Zh5FrOdxRBqdvZf3-ynpgf_R_G-wwwc7QCY-3gOEE1yAQYHPkRw2fgx_MP-FbpOnGI</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1779883464</pqid></control><display><type>article</type><title>Structural Insights into the HWE Histidine Kinase Family: The Brucella Blue Light-Activated Histidine Kinase Domain</title><source>MEDLINE</source><source>Elsevier ScienceDirect Journals</source><creator>Rinaldi, Jimena ; Arrar, Mehrnoosh ; Sycz, Gabriela ; Cerutti, María Laura ; Berguer, Paula M. ; Paris, Gastón ; Estrín, Darío Ariel ; Martí, Marcelo Adrián ; Klinke, Sebastián ; Goldbaum, Fernando Alberto</creator><creatorcontrib>Rinaldi, Jimena ; Arrar, Mehrnoosh ; Sycz, Gabriela ; Cerutti, María Laura ; Berguer, Paula M. ; Paris, Gastón ; Estrín, Darío Ariel ; Martí, Marcelo Adrián ; Klinke, Sebastián ; Goldbaum, Fernando Alberto</creatorcontrib><description>In response to light, as part of a two-component system, the Brucella blue light-activated histidine kinase (LOV-HK) increases its autophosphorylation, modulating the virulence of this microorganism. The Brucella histidine kinase (HK) domain belongs to the HWE family, for which there is no structural information. The HWE family is exclusively present in proteobacteria and usually coupled to a wide diversity of light sensor domains. This work reports the crystal structure of the Brucella HK domain, which presents two different dimeric assemblies in the asymmetric unit: one similar to the already described canonical parallel homodimers (C) and the other, an antiparallel non-canonical (NC) dimer, each with distinct relative subdomain orientations and dimerization interfaces. Contrary to these crystallographic structures and unlike other HKs, in solution, the Brucella HK domain is monomeric and still active, showing an astonishing instability of the dimeric interface. Despite this instability, using cross-linking experiments, we show that the C dimer is the functionally relevant species. Mutational analysis demonstrates that the autophosphorylation activity occurs in cis. The different relative subdomain orientations observed for the NC and C states highlight the large conformational flexibility of the HK domain. Through the analysis of these alternative conformations by means of molecular dynamics simulations, we also propose a catalytic mechanism for Brucella LOV-HK. [Display omitted] •The crystal structure of the Brucella HK domain reveals two distinct dimers.•In solution, the Brucella HK domain is an active monomer.•The canonical dimer is the functionally relevant species.•The autophosphorylation occurs in cis.•A catalytic mechanism for Brucella LOV-HK is proposed.</description><identifier>ISSN: 0022-2836</identifier><identifier>EISSN: 1089-8638</identifier><identifier>DOI: 10.1016/j.jmb.2016.01.026</identifier><identifier>PMID: 26851072</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>autophosphorylation mechanism ; Brucella ; Brucella - enzymology ; Crystallography, X-Ray ; DNA Mutational Analysis ; Histidine Kinase ; Molecular Dynamics Simulation ; molecular dynamics simulations ; Phosphorylation ; Protein Conformation ; Protein Kinases - chemistry ; Protein Kinases - genetics ; Protein Kinases - metabolism ; Protein Multimerization ; Protein Processing, Post-Translational ; Proteobacteria ; signal transduction ; two-component system ; X-ray crystallography</subject><ispartof>Journal of molecular biology, 2016-03, Vol.428 (6), p.1165-1179</ispartof><rights>2016 Elsevier Ltd</rights><rights>Copyright © 2016 Elsevier Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c429t-42643b3701211e398217a7d2668ac113b5a71ff590e7c75d89cdb60ddc9e877f3</citedby><cites>FETCH-LOGICAL-c429t-42643b3701211e398217a7d2668ac113b5a71ff590e7c75d89cdb60ddc9e877f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0022283616000814$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26851072$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Rinaldi, Jimena</creatorcontrib><creatorcontrib>Arrar, Mehrnoosh</creatorcontrib><creatorcontrib>Sycz, Gabriela</creatorcontrib><creatorcontrib>Cerutti, María Laura</creatorcontrib><creatorcontrib>Berguer, Paula M.</creatorcontrib><creatorcontrib>Paris, Gastón</creatorcontrib><creatorcontrib>Estrín, Darío Ariel</creatorcontrib><creatorcontrib>Martí, Marcelo Adrián</creatorcontrib><creatorcontrib>Klinke, Sebastián</creatorcontrib><creatorcontrib>Goldbaum, Fernando Alberto</creatorcontrib><title>Structural Insights into the HWE Histidine Kinase Family: The Brucella Blue Light-Activated Histidine Kinase Domain</title><title>Journal of molecular biology</title><addtitle>J Mol Biol</addtitle><description>In response to light, as part of a two-component system, the Brucella blue light-activated histidine kinase (LOV-HK) increases its autophosphorylation, modulating the virulence of this microorganism. The Brucella histidine kinase (HK) domain belongs to the HWE family, for which there is no structural information. The HWE family is exclusively present in proteobacteria and usually coupled to a wide diversity of light sensor domains. This work reports the crystal structure of the Brucella HK domain, which presents two different dimeric assemblies in the asymmetric unit: one similar to the already described canonical parallel homodimers (C) and the other, an antiparallel non-canonical (NC) dimer, each with distinct relative subdomain orientations and dimerization interfaces. Contrary to these crystallographic structures and unlike other HKs, in solution, the Brucella HK domain is monomeric and still active, showing an astonishing instability of the dimeric interface. Despite this instability, using cross-linking experiments, we show that the C dimer is the functionally relevant species. Mutational analysis demonstrates that the autophosphorylation activity occurs in cis. The different relative subdomain orientations observed for the NC and C states highlight the large conformational flexibility of the HK domain. Through the analysis of these alternative conformations by means of molecular dynamics simulations, we also propose a catalytic mechanism for Brucella LOV-HK. [Display omitted] •The crystal structure of the Brucella HK domain reveals two distinct dimers.•In solution, the Brucella HK domain is an active monomer.•The canonical dimer is the functionally relevant species.•The autophosphorylation occurs in cis.•A catalytic mechanism for Brucella LOV-HK is proposed.</description><subject>autophosphorylation mechanism</subject><subject>Brucella</subject><subject>Brucella - enzymology</subject><subject>Crystallography, X-Ray</subject><subject>DNA Mutational Analysis</subject><subject>Histidine Kinase</subject><subject>Molecular Dynamics Simulation</subject><subject>molecular dynamics simulations</subject><subject>Phosphorylation</subject><subject>Protein Conformation</subject><subject>Protein Kinases - chemistry</subject><subject>Protein Kinases - genetics</subject><subject>Protein Kinases - metabolism</subject><subject>Protein Multimerization</subject><subject>Protein Processing, Post-Translational</subject><subject>Proteobacteria</subject><subject>signal transduction</subject><subject>two-component system</subject><subject>X-ray crystallography</subject><issn>0022-2836</issn><issn>1089-8638</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkUlPHDEUhC2UKAyT_AAukY-5dMdLt5dwYs0gRuIQEEfLbb8Gj3oB243Ev6cnA7lEinJ67_BVqVSF0CElJSVUfN-Um74p2fyWhJaEiT20oETpQgmuPqAFIYwVTHGxjw5S2hBCal6pT2ifCVVTItkCpV85Ti5P0Xb4ckjh_iEnHIY84vwAeHV3jlch5eDDAPgqDDYBvrB96F5-4JsZOJnF0HUWn3QT4PVWXhy7HJ5tBv-39GzsbRg-o4-t7RJ8ebtLdHtxfnO6KtbXPy9Pj9eFq5jORcVExRsuCWWUAteKUWmlZ0Io6yjlTW0lbdtaE5BO1l5p5xtBvHcalJQtX6JvO9_HOD5NkLLpQ_odd4BxSoZKXVW6nnv7D1RqpXg1J1oiukNdHFOK0JrHGHobXwwlZjuL2Zh5FrOdxRBqdvZf3-ynpgf_R_G-wwwc7QCY-3gOEE1yAQYHPkRw2fgx_MP-FbpOnGI</recordid><startdate>20160327</startdate><enddate>20160327</enddate><creator>Rinaldi, Jimena</creator><creator>Arrar, Mehrnoosh</creator><creator>Sycz, Gabriela</creator><creator>Cerutti, María Laura</creator><creator>Berguer, Paula M.</creator><creator>Paris, Gastón</creator><creator>Estrín, Darío Ariel</creator><creator>Martí, Marcelo Adrián</creator><creator>Klinke, Sebastián</creator><creator>Goldbaum, Fernando Alberto</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QL</scope><scope>C1K</scope></search><sort><creationdate>20160327</creationdate><title>Structural Insights into the HWE Histidine Kinase Family: The Brucella Blue Light-Activated Histidine Kinase Domain</title><author>Rinaldi, Jimena ; Arrar, Mehrnoosh ; Sycz, Gabriela ; Cerutti, María Laura ; Berguer, Paula M. ; Paris, Gastón ; Estrín, Darío Ariel ; Martí, Marcelo Adrián ; Klinke, Sebastián ; Goldbaum, Fernando Alberto</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c429t-42643b3701211e398217a7d2668ac113b5a71ff590e7c75d89cdb60ddc9e877f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>autophosphorylation mechanism</topic><topic>Brucella</topic><topic>Brucella - enzymology</topic><topic>Crystallography, X-Ray</topic><topic>DNA Mutational Analysis</topic><topic>Histidine Kinase</topic><topic>Molecular Dynamics Simulation</topic><topic>molecular dynamics simulations</topic><topic>Phosphorylation</topic><topic>Protein Conformation</topic><topic>Protein Kinases - chemistry</topic><topic>Protein Kinases - genetics</topic><topic>Protein Kinases - metabolism</topic><topic>Protein Multimerization</topic><topic>Protein Processing, Post-Translational</topic><topic>Proteobacteria</topic><topic>signal transduction</topic><topic>two-component system</topic><topic>X-ray crystallography</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Rinaldi, Jimena</creatorcontrib><creatorcontrib>Arrar, Mehrnoosh</creatorcontrib><creatorcontrib>Sycz, Gabriela</creatorcontrib><creatorcontrib>Cerutti, María Laura</creatorcontrib><creatorcontrib>Berguer, Paula M.</creatorcontrib><creatorcontrib>Paris, Gastón</creatorcontrib><creatorcontrib>Estrín, Darío Ariel</creatorcontrib><creatorcontrib>Martí, Marcelo Adrián</creatorcontrib><creatorcontrib>Klinke, Sebastián</creatorcontrib><creatorcontrib>Goldbaum, Fernando Alberto</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><jtitle>Journal of molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Rinaldi, Jimena</au><au>Arrar, Mehrnoosh</au><au>Sycz, Gabriela</au><au>Cerutti, María Laura</au><au>Berguer, Paula M.</au><au>Paris, Gastón</au><au>Estrín, Darío Ariel</au><au>Martí, Marcelo Adrián</au><au>Klinke, Sebastián</au><au>Goldbaum, Fernando Alberto</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Structural Insights into the HWE Histidine Kinase Family: The Brucella Blue Light-Activated Histidine Kinase Domain</atitle><jtitle>Journal of molecular biology</jtitle><addtitle>J Mol Biol</addtitle><date>2016-03-27</date><risdate>2016</risdate><volume>428</volume><issue>6</issue><spage>1165</spage><epage>1179</epage><pages>1165-1179</pages><issn>0022-2836</issn><eissn>1089-8638</eissn><abstract>In response to light, as part of a two-component system, the Brucella blue light-activated histidine kinase (LOV-HK) increases its autophosphorylation, modulating the virulence of this microorganism. The Brucella histidine kinase (HK) domain belongs to the HWE family, for which there is no structural information. The HWE family is exclusively present in proteobacteria and usually coupled to a wide diversity of light sensor domains. This work reports the crystal structure of the Brucella HK domain, which presents two different dimeric assemblies in the asymmetric unit: one similar to the already described canonical parallel homodimers (C) and the other, an antiparallel non-canonical (NC) dimer, each with distinct relative subdomain orientations and dimerization interfaces. Contrary to these crystallographic structures and unlike other HKs, in solution, the Brucella HK domain is monomeric and still active, showing an astonishing instability of the dimeric interface. Despite this instability, using cross-linking experiments, we show that the C dimer is the functionally relevant species. Mutational analysis demonstrates that the autophosphorylation activity occurs in cis. The different relative subdomain orientations observed for the NC and C states highlight the large conformational flexibility of the HK domain. Through the analysis of these alternative conformations by means of molecular dynamics simulations, we also propose a catalytic mechanism for Brucella LOV-HK. [Display omitted] •The crystal structure of the Brucella HK domain reveals two distinct dimers.•In solution, the Brucella HK domain is an active monomer.•The canonical dimer is the functionally relevant species.•The autophosphorylation occurs in cis.•A catalytic mechanism for Brucella LOV-HK is proposed.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>26851072</pmid><doi>10.1016/j.jmb.2016.01.026</doi><tpages>15</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 0022-2836
ispartof Journal of molecular biology, 2016-03, Vol.428 (6), p.1165-1179
issn 0022-2836
1089-8638
language eng
recordid cdi_proquest_miscellaneous_1794495026
source MEDLINE; Elsevier ScienceDirect Journals
subjects autophosphorylation mechanism
Brucella
Brucella - enzymology
Crystallography, X-Ray
DNA Mutational Analysis
Histidine Kinase
Molecular Dynamics Simulation
molecular dynamics simulations
Phosphorylation
Protein Conformation
Protein Kinases - chemistry
Protein Kinases - genetics
Protein Kinases - metabolism
Protein Multimerization
Protein Processing, Post-Translational
Proteobacteria
signal transduction
two-component system
X-ray crystallography
title Structural Insights into the HWE Histidine Kinase Family: The Brucella Blue Light-Activated Histidine Kinase Domain
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-29T22%3A42%3A14IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Structural%20Insights%20into%20the%20HWE%20Histidine%20Kinase%20Family:%20The%20Brucella%20Blue%20Light-Activated%20Histidine%20Kinase%20Domain&rft.jtitle=Journal%20of%20molecular%20biology&rft.au=Rinaldi,%20Jimena&rft.date=2016-03-27&rft.volume=428&rft.issue=6&rft.spage=1165&rft.epage=1179&rft.pages=1165-1179&rft.issn=0022-2836&rft.eissn=1089-8638&rft_id=info:doi/10.1016/j.jmb.2016.01.026&rft_dat=%3Cproquest_cross%3E1779883464%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1779883464&rft_id=info:pmid/26851072&rft_els_id=S0022283616000814&rfr_iscdi=true