Exploring complex pheromone biosynthetic processes in the bumblebee male labial gland by RNA sequencing
Male marking pheromones (MPs) are used by the majority of bumblebee species (Hymenoptera: Apidae), including a commercially important greenhouse pollinator, the buff‐tailed bumblebee (Bombus terrestris), to attract conspecific females. MP biosynthetic processes in the cephalic part of the bumblebee...
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Veröffentlicht in: | Insect molecular biology 2016-06, Vol.25 (3), p.295-314 |
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description | Male marking pheromones (MPs) are used by the majority of bumblebee species (Hymenoptera: Apidae), including a commercially important greenhouse pollinator, the buff‐tailed bumblebee (Bombus terrestris), to attract conspecific females. MP biosynthetic processes in the cephalic part of the bumblebee male labial gland (LG) are of extraordinary complexity, involving enzymes of fatty acid and isoprenoid biosynthesis, which jointly produce more than 50 compounds. We employed a differential transcriptomic approach to identify candidate genes involved in MP biosynthesis by sequencing Bombus terrestris LG and fat body (FB) transcriptomes. We identified 12 454 abundantly expressed gene products (reads per kilobase of exon model per million mapped reads value > 1) that had significant hits in the GenBank nonredundant database. Of these, 876 were upregulated in the LG (> 4‐fold difference). We identified more than 140 candidate genes potentially involved in MP biosynthesis, including esterases, fatty acid reductases, lipases, enzymes involved in limited fatty acid chain shortening, neuropeptide receptors and enzymes involved in biosynthesis of triacylglycerols, isoprenoids and fatty acids. For selected candidates, we confirmed their abundant expression in LG using quantitative real‐time reverse transcription‐PCR (qRT‐PCR). Our study shows that the Bombus terrestris LG transcriptome reflects both fatty acid and isoprenoid MP biosynthetic processes and identifies rational gene targets for future studies to disentangle the molecular basis of MP biosynthesis. Additionally, LG and FB transcriptomes enrich the available transcriptomic resources for Bombus terrestris. |
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MP biosynthetic processes in the cephalic part of the bumblebee male labial gland (LG) are of extraordinary complexity, involving enzymes of fatty acid and isoprenoid biosynthesis, which jointly produce more than 50 compounds. We employed a differential transcriptomic approach to identify candidate genes involved in MP biosynthesis by sequencing Bombus terrestris LG and fat body (FB) transcriptomes. We identified 12 454 abundantly expressed gene products (reads per kilobase of exon model per million mapped reads value > 1) that had significant hits in the GenBank nonredundant database. Of these, 876 were upregulated in the LG (> 4‐fold difference). We identified more than 140 candidate genes potentially involved in MP biosynthesis, including esterases, fatty acid reductases, lipases, enzymes involved in limited fatty acid chain shortening, neuropeptide receptors and enzymes involved in biosynthesis of triacylglycerols, isoprenoids and fatty acids. For selected candidates, we confirmed their abundant expression in LG using quantitative real‐time reverse transcription‐PCR (qRT‐PCR). Our study shows that the Bombus terrestris LG transcriptome reflects both fatty acid and isoprenoid MP biosynthetic processes and identifies rational gene targets for future studies to disentangle the molecular basis of MP biosynthesis. 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MP biosynthetic processes in the cephalic part of the bumblebee male labial gland (LG) are of extraordinary complexity, involving enzymes of fatty acid and isoprenoid biosynthesis, which jointly produce more than 50 compounds. We employed a differential transcriptomic approach to identify candidate genes involved in MP biosynthesis by sequencing Bombus terrestris LG and fat body (FB) transcriptomes. We identified 12 454 abundantly expressed gene products (reads per kilobase of exon model per million mapped reads value > 1) that had significant hits in the GenBank nonredundant database. Of these, 876 were upregulated in the LG (> 4‐fold difference). We identified more than 140 candidate genes potentially involved in MP biosynthesis, including esterases, fatty acid reductases, lipases, enzymes involved in limited fatty acid chain shortening, neuropeptide receptors and enzymes involved in biosynthesis of triacylglycerols, isoprenoids and fatty acids. For selected candidates, we confirmed their abundant expression in LG using quantitative real‐time reverse transcription‐PCR (qRT‐PCR). Our study shows that the Bombus terrestris LG transcriptome reflects both fatty acid and isoprenoid MP biosynthetic processes and identifies rational gene targets for future studies to disentangle the molecular basis of MP biosynthesis. Additionally, LG and FB transcriptomes enrich the available transcriptomic resources for Bombus terrestris.</description><subject>Aldehyde Oxidoreductases - metabolism</subject><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Apidae</subject><subject>Apoptosis</subject><subject>Bees - metabolism</subject><subject>Bombus terrestris</subject><subject>Fat Body - metabolism</subject><subject>Fatty Acid Desaturases - metabolism</subject><subject>Fatty Acids - biosynthesis</subject><subject>Hydrolysis</subject><subject>Hymenoptera</subject><subject>labial gland</subject><subject>Lipid Metabolism</subject><subject>Male</subject><subject>marking pheromone biosynthesis</subject><subject>Molecular Sequence Data</subject><subject>Pheromones - biosynthesis</subject><subject>Polymerase Chain Reaction</subject><subject>RNA-seq</subject><subject>Sequence Analysis, RNA</subject><subject>Terpenes - metabolism</subject><subject>Transcriptome</subject><issn>0962-1075</issn><issn>1365-2583</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkcFu1DAQhiMEokvhwAuAJS5wSDu2Yzs-tlXbrVQKAiq4WXYy2bokcYg36u7b4yVtD0hI-GLJ-ubzzPxZ9prCAU3n0HfugDLG6JNsQbkUORMlf5otQEuWU1BiL3sR4y0AlFrq59kek7oQZVkustXpZmjD6PsVqUI3tLghww2OoQs9EudD3PbrG1z7igxjqDBGjMT3JL0RN3WuRYdIOtsiaa3ztiWr1vY1cVvy5eqIRPw1YV8l-8vsWWPbiK_u7_3s-uz028kyv_x0fnFydJlXRVHSXHJhC47cQi0EQ3QcAXVV27JhgmmBtaLSclFYZ0XDVQGWIiiAugaBuuT72fvZm9pNf8e16XyssE1dYZiioUqnrSjN-H-gpSqUpnxnffcXehumsU-D7CipFJcaEvVhpqoxxDhiY4bRd3bcGgpmF5RJQZk_QSX2zb1xch3Wj-RDMgk4nIE73-L23yZz8fH4QZnPFT6ucfNYYcefRiquhPl-dW4kLGHJjz-bH4l_O_ONDcauRh_N9VcGVAJQVTAQ_De87LQx</recordid><startdate>201606</startdate><enddate>201606</enddate><creator>Buček, A.</creator><creator>Brabcová, J.</creator><creator>Vogel, H.</creator><creator>Prchalová, D.</creator><creator>Kindl, J.</creator><creator>Valterová, I.</creator><creator>Pichová, I.</creator><general>Published for the Royal Entomological Society by Blackwell Scientific Publications</general><general>Blackwell Publishing Ltd</general><scope>FBQ</scope><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QR</scope><scope>7SS</scope><scope>7TK</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>201606</creationdate><title>Exploring complex pheromone biosynthetic processes in the bumblebee male labial gland by RNA sequencing</title><author>Buček, A. ; Brabcová, J. ; Vogel, H. ; Prchalová, D. ; Kindl, J. ; Valterová, I. ; Pichová, I.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4481-635a43e3a0d552eeb3e0e9cda8f25295ed716a354aba5f3740a1e0700dd05e983</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Aldehyde Oxidoreductases - metabolism</topic><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Apidae</topic><topic>Apoptosis</topic><topic>Bees - metabolism</topic><topic>Bombus terrestris</topic><topic>Fat Body - metabolism</topic><topic>Fatty Acid Desaturases - metabolism</topic><topic>Fatty Acids - biosynthesis</topic><topic>Hydrolysis</topic><topic>Hymenoptera</topic><topic>labial gland</topic><topic>Lipid Metabolism</topic><topic>Male</topic><topic>marking pheromone biosynthesis</topic><topic>Molecular Sequence Data</topic><topic>Pheromones - biosynthesis</topic><topic>Polymerase Chain Reaction</topic><topic>RNA-seq</topic><topic>Sequence Analysis, RNA</topic><topic>Terpenes - metabolism</topic><topic>Transcriptome</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Buček, A.</creatorcontrib><creatorcontrib>Brabcová, J.</creatorcontrib><creatorcontrib>Vogel, H.</creatorcontrib><creatorcontrib>Prchalová, D.</creatorcontrib><creatorcontrib>Kindl, J.</creatorcontrib><creatorcontrib>Valterová, I.</creatorcontrib><creatorcontrib>Pichová, I.</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Chemoreception Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Insect molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Buček, A.</au><au>Brabcová, J.</au><au>Vogel, H.</au><au>Prchalová, D.</au><au>Kindl, J.</au><au>Valterová, I.</au><au>Pichová, I.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Exploring complex pheromone biosynthetic processes in the bumblebee male labial gland by RNA sequencing</atitle><jtitle>Insect molecular biology</jtitle><addtitle>Insect Mol Biol</addtitle><date>2016-06</date><risdate>2016</risdate><volume>25</volume><issue>3</issue><spage>295</spage><epage>314</epage><pages>295-314</pages><issn>0962-1075</issn><eissn>1365-2583</eissn><abstract>Male marking pheromones (MPs) are used by the majority of bumblebee species (Hymenoptera: Apidae), including a commercially important greenhouse pollinator, the buff‐tailed bumblebee (Bombus terrestris), to attract conspecific females. MP biosynthetic processes in the cephalic part of the bumblebee male labial gland (LG) are of extraordinary complexity, involving enzymes of fatty acid and isoprenoid biosynthesis, which jointly produce more than 50 compounds. We employed a differential transcriptomic approach to identify candidate genes involved in MP biosynthesis by sequencing Bombus terrestris LG and fat body (FB) transcriptomes. We identified 12 454 abundantly expressed gene products (reads per kilobase of exon model per million mapped reads value > 1) that had significant hits in the GenBank nonredundant database. Of these, 876 were upregulated in the LG (> 4‐fold difference). We identified more than 140 candidate genes potentially involved in MP biosynthesis, including esterases, fatty acid reductases, lipases, enzymes involved in limited fatty acid chain shortening, neuropeptide receptors and enzymes involved in biosynthesis of triacylglycerols, isoprenoids and fatty acids. For selected candidates, we confirmed their abundant expression in LG using quantitative real‐time reverse transcription‐PCR (qRT‐PCR). Our study shows that the Bombus terrestris LG transcriptome reflects both fatty acid and isoprenoid MP biosynthetic processes and identifies rational gene targets for future studies to disentangle the molecular basis of MP biosynthesis. Additionally, LG and FB transcriptomes enrich the available transcriptomic resources for Bombus terrestris.</abstract><cop>England</cop><pub>Published for the Royal Entomological Society by Blackwell Scientific Publications</pub><pmid>26945888</pmid><doi>10.1111/imb.12221</doi><tpages>20</tpages></addata></record> |
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subjects | Aldehyde Oxidoreductases - metabolism Amino Acid Sequence Animals Apidae Apoptosis Bees - metabolism Bombus terrestris Fat Body - metabolism Fatty Acid Desaturases - metabolism Fatty Acids - biosynthesis Hydrolysis Hymenoptera labial gland Lipid Metabolism Male marking pheromone biosynthesis Molecular Sequence Data Pheromones - biosynthesis Polymerase Chain Reaction RNA-seq Sequence Analysis, RNA Terpenes - metabolism Transcriptome |
title | Exploring complex pheromone biosynthetic processes in the bumblebee male labial gland by RNA sequencing |
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