Symbiotic relationship analysis of predominant bacteria in a lab-scale anammox UASB bioreactor
In order to provide the comprehensive insight into the key microbial groups in anaerobic ammonium oxidation (anammox) process, high-throughput sequencing analysis has been used for the investigation of the bacterial communities of a lab-scale upflow anaerobic sludge bed (UASB) anammox bioreactor. Re...
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| Veröffentlicht in: | Environmental science and pollution research international 2016-04, Vol.23 (8), p.7615-7626 |
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| creator | Wang, Yujia Hu, Xiaomin Jiang, Binhui Song, Zhenhui Ma, Yongguang |
| description | In order to provide the comprehensive insight into the key microbial groups in anaerobic ammonium oxidation (anammox) process, high-throughput sequencing analysis has been used for the investigation of the bacterial communities of a lab-scale upflow anaerobic sludge bed (UASB) anammox bioreactor. Results revealed that 109 operational taxonomic units (OTUs; out of 14,820 reads) were identified and a domination of anammox bacteria of Candidatus
Kuenenia stuttgartiensis
(OTU474, 35.42 %), along with heterotrophs of
Limnobacter
sp
.
MED105 (OTU951, 14.98 %),
Anerolinea thermophila
UNI-1 (OTU465 and OTU833, 6.60 and 3.93 %),
Azoarcus
sp. B72 (OTU26, 9.47 %), and
Ignavibacterium
sp
.
JCM 16511 (OTU459, 8.33 %) were detected. Metabolic pathway analysis showed that Candidatus
K. stuttgartiensis
encountered gene defect in synthesizing a series of metabolic cofactors for growth, implying that
K. stuttgartiensis
is auxotrophic. Coincidentally, the other dominant species severally showed complete metabolic pathways with full set gene encoding to corresponding cofactors presented in the surrounding environment. Furthermore, it was likely that the survival of heterotrophs in the autotrophic system indicates the existence of a symbiotic and mutual relationship in anammox system. |
| doi_str_mv | 10.1007/s11356-015-6016-z |
| format | Article |
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Kuenenia stuttgartiensis
(OTU474, 35.42 %), along with heterotrophs of
Limnobacter
sp
.
MED105 (OTU951, 14.98 %),
Anerolinea thermophila
UNI-1 (OTU465 and OTU833, 6.60 and 3.93 %),
Azoarcus
sp. B72 (OTU26, 9.47 %), and
Ignavibacterium
sp
.
JCM 16511 (OTU459, 8.33 %) were detected. Metabolic pathway analysis showed that Candidatus
K. stuttgartiensis
encountered gene defect in synthesizing a series of metabolic cofactors for growth, implying that
K. stuttgartiensis
is auxotrophic. Coincidentally, the other dominant species severally showed complete metabolic pathways with full set gene encoding to corresponding cofactors presented in the surrounding environment. Furthermore, it was likely that the survival of heterotrophs in the autotrophic system indicates the existence of a symbiotic and mutual relationship in anammox system.</description><identifier>ISSN: 0944-1344</identifier><identifier>EISSN: 1614-7499</identifier><identifier>DOI: 10.1007/s11356-015-6016-z</identifier><identifier>PMID: 26739990</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Ammonia - chemistry ; Ammonia - metabolism ; Ammonium ; Aquatic Pollution ; Atmospheric Protection/Air Quality Control/Air Pollution ; Azoarcus ; Bacteria ; Bioreactors ; Bioreactors - microbiology ; Civil engineering ; Denitrification ; Dominant species ; Drinking water ; Earth and Environmental Science ; Ecotoxicology ; Energy consumption ; Environment ; Environmental Chemistry ; Environmental Health ; Environmental science ; Genomes ; Limnobacter ; Metabolism ; Microorganisms ; Nitrogen ; Oxidation ; Research Article ; Sewage ; Sludge ; Sludge bed ; Studies ; Symbiosis ; Waste Water Technology ; Water Management ; Water Pollution Control</subject><ispartof>Environmental science and pollution research international, 2016-04, Vol.23 (8), p.7615-7626</ispartof><rights>Springer-Verlag Berlin Heidelberg 2015</rights><rights>Springer-Verlag Berlin Heidelberg 2016</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c508t-b1075d92d2dee7ebf41bbe41c55c181fe9364eda26df48832d98bbeb757176603</citedby><cites>FETCH-LOGICAL-c508t-b1075d92d2dee7ebf41bbe41c55c181fe9364eda26df48832d98bbeb757176603</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11356-015-6016-z$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11356-015-6016-z$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27903,27904,41467,42536,51298</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26739990$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wang, Yujia</creatorcontrib><creatorcontrib>Hu, Xiaomin</creatorcontrib><creatorcontrib>Jiang, Binhui</creatorcontrib><creatorcontrib>Song, Zhenhui</creatorcontrib><creatorcontrib>Ma, Yongguang</creatorcontrib><title>Symbiotic relationship analysis of predominant bacteria in a lab-scale anammox UASB bioreactor</title><title>Environmental science and pollution research international</title><addtitle>Environ Sci Pollut Res</addtitle><addtitle>Environ Sci Pollut Res Int</addtitle><description>In order to provide the comprehensive insight into the key microbial groups in anaerobic ammonium oxidation (anammox) process, high-throughput sequencing analysis has been used for the investigation of the bacterial communities of a lab-scale upflow anaerobic sludge bed (UASB) anammox bioreactor. Results revealed that 109 operational taxonomic units (OTUs; out of 14,820 reads) were identified and a domination of anammox bacteria of Candidatus
Kuenenia stuttgartiensis
(OTU474, 35.42 %), along with heterotrophs of
Limnobacter
sp
.
MED105 (OTU951, 14.98 %),
Anerolinea thermophila
UNI-1 (OTU465 and OTU833, 6.60 and 3.93 %),
Azoarcus
sp. B72 (OTU26, 9.47 %), and
Ignavibacterium
sp
.
JCM 16511 (OTU459, 8.33 %) were detected. Metabolic pathway analysis showed that Candidatus
K. stuttgartiensis
encountered gene defect in synthesizing a series of metabolic cofactors for growth, implying that
K. stuttgartiensis
is auxotrophic. Coincidentally, the other dominant species severally showed complete metabolic pathways with full set gene encoding to corresponding cofactors presented in the surrounding environment. Furthermore, it was likely that the survival of heterotrophs in the autotrophic system indicates the existence of a symbiotic and mutual relationship in anammox system.</description><subject>Ammonia - chemistry</subject><subject>Ammonia - metabolism</subject><subject>Ammonium</subject><subject>Aquatic Pollution</subject><subject>Atmospheric Protection/Air Quality Control/Air Pollution</subject><subject>Azoarcus</subject><subject>Bacteria</subject><subject>Bioreactors</subject><subject>Bioreactors - microbiology</subject><subject>Civil engineering</subject><subject>Denitrification</subject><subject>Dominant species</subject><subject>Drinking water</subject><subject>Earth and Environmental Science</subject><subject>Ecotoxicology</subject><subject>Energy consumption</subject><subject>Environment</subject><subject>Environmental Chemistry</subject><subject>Environmental Health</subject><subject>Environmental science</subject><subject>Genomes</subject><subject>Limnobacter</subject><subject>Metabolism</subject><subject>Microorganisms</subject><subject>Nitrogen</subject><subject>Oxidation</subject><subject>Research Article</subject><subject>Sewage</subject><subject>Sludge</subject><subject>Sludge bed</subject><subject>Studies</subject><subject>Symbiosis</subject><subject>Waste Water Technology</subject><subject>Water Management</subject><subject>Water Pollution Control</subject><issn>0944-1344</issn><issn>1614-7499</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqN0UFLHDEUB_BQlLq1_QBeSsBLL9G8TCaZHFWsFQQP6tWQzLxpIzOTbTILrp--WddKKQiecsjv_R-8PyEHwI-Ac32cAapaMQ41UxwUe_pAFqBAMi2N2SELbqRkUEm5Rz7l_MC54Eboj2RPKF0ZY_iC3N-sRx_iHFqacHBziFP-FZbUTW5Y55Bp7OkyYRfHMLlppt61M6bgaJioo4PzLLduwI0fx_hI705uTmkJTFhgTJ_Jbu-GjF9e3n1y9_389uwHu7q-uDw7uWJtzZuZeeC67ozoRIeo0fcSvEcJbV230ECPplISOydU18umqURnmgK8rjVopXi1T75tc5cp_l5hnu0YcovD4CaMq2xBm3IMrSv9DtrUAjQ3qtDD_-hDXKVymWclJShTbXbDVrUp5pywt8sURpfWFrjd9GS3PdnSk930ZJ_KzNeX5JUfsXud-FtMAWILcvmafmL6Z_WbqX8A-Omd3Q</recordid><startdate>20160401</startdate><enddate>20160401</enddate><creator>Wang, Yujia</creator><creator>Hu, Xiaomin</creator><creator>Jiang, Binhui</creator><creator>Song, Zhenhui</creator><creator>Ma, Yongguang</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7SN</scope><scope>7T7</scope><scope>7TV</scope><scope>7U7</scope><scope>7WY</scope><scope>7WZ</scope><scope>7X7</scope><scope>7XB</scope><scope>87Z</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8FL</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BEZIV</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FRNLG</scope><scope>FYUFA</scope><scope>F~G</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K60</scope><scope>K6~</scope><scope>K9.</scope><scope>L.-</scope><scope>M0C</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7N</scope><scope>P64</scope><scope>PATMY</scope><scope>PQBIZ</scope><scope>PQBZA</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PYCSY</scope><scope>Q9U</scope><scope>7X8</scope><scope>7ST</scope><scope>SOI</scope></search><sort><creationdate>20160401</creationdate><title>Symbiotic relationship analysis of predominant bacteria in a lab-scale anammox UASB bioreactor</title><author>Wang, Yujia ; Hu, Xiaomin ; Jiang, Binhui ; Song, Zhenhui ; Ma, Yongguang</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c508t-b1075d92d2dee7ebf41bbe41c55c181fe9364eda26df48832d98bbeb757176603</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Ammonia - 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Academic</collection><collection>Environment Abstracts</collection><collection>Environment Abstracts</collection><jtitle>Environmental science and pollution research international</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wang, Yujia</au><au>Hu, Xiaomin</au><au>Jiang, Binhui</au><au>Song, Zhenhui</au><au>Ma, Yongguang</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Symbiotic relationship analysis of predominant bacteria in a lab-scale anammox UASB bioreactor</atitle><jtitle>Environmental science and pollution research international</jtitle><stitle>Environ Sci Pollut Res</stitle><addtitle>Environ Sci Pollut Res Int</addtitle><date>2016-04-01</date><risdate>2016</risdate><volume>23</volume><issue>8</issue><spage>7615</spage><epage>7626</epage><pages>7615-7626</pages><issn>0944-1344</issn><eissn>1614-7499</eissn><abstract>In order to provide the comprehensive insight into the key microbial groups in anaerobic ammonium oxidation (anammox) process, high-throughput sequencing analysis has been used for the investigation of the bacterial communities of a lab-scale upflow anaerobic sludge bed (UASB) anammox bioreactor. Results revealed that 109 operational taxonomic units (OTUs; out of 14,820 reads) were identified and a domination of anammox bacteria of Candidatus
Kuenenia stuttgartiensis
(OTU474, 35.42 %), along with heterotrophs of
Limnobacter
sp
.
MED105 (OTU951, 14.98 %),
Anerolinea thermophila
UNI-1 (OTU465 and OTU833, 6.60 and 3.93 %),
Azoarcus
sp. B72 (OTU26, 9.47 %), and
Ignavibacterium
sp
.
JCM 16511 (OTU459, 8.33 %) were detected. Metabolic pathway analysis showed that Candidatus
K. stuttgartiensis
encountered gene defect in synthesizing a series of metabolic cofactors for growth, implying that
K. stuttgartiensis
is auxotrophic. Coincidentally, the other dominant species severally showed complete metabolic pathways with full set gene encoding to corresponding cofactors presented in the surrounding environment. Furthermore, it was likely that the survival of heterotrophs in the autotrophic system indicates the existence of a symbiotic and mutual relationship in anammox system.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>26739990</pmid><doi>10.1007/s11356-015-6016-z</doi><tpages>12</tpages></addata></record> |
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| ispartof | Environmental science and pollution research international, 2016-04, Vol.23 (8), p.7615-7626 |
| issn | 0944-1344 1614-7499 |
| language | eng |
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| source | MEDLINE; Springer Nature - Complete Springer Journals |
| subjects | Ammonia - chemistry Ammonia - metabolism Ammonium Aquatic Pollution Atmospheric Protection/Air Quality Control/Air Pollution Azoarcus Bacteria Bioreactors Bioreactors - microbiology Civil engineering Denitrification Dominant species Drinking water Earth and Environmental Science Ecotoxicology Energy consumption Environment Environmental Chemistry Environmental Health Environmental science Genomes Limnobacter Metabolism Microorganisms Nitrogen Oxidation Research Article Sewage Sludge Sludge bed Studies Symbiosis Waste Water Technology Water Management Water Pollution Control |
| title | Symbiotic relationship analysis of predominant bacteria in a lab-scale anammox UASB bioreactor |
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