Isolation and heterologous expression of the Phanerochaete chrysosporium calmodulin gene

We cloned complementary DNA (cDNA) corresponding to protein_id 10767 using transcripts extracted from a culture expressing ligninolytic enzymes, which is registered as a Ca2+-binding protein in the Phanerochaete chrysosporium whole genome database. We used our results to correct an amino acid sequen...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Mycoscience 2012, Vol.54(3), pp.241-246
Hauptverfasser: Sakamoto, Takaiku, Honda, Yoichi, Kameshita, Isamu, Suzuki, Kazumi, Irie, Toshikazu
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 246
container_issue 3
container_start_page 241
container_title Mycoscience
container_volume 54
creator Sakamoto, Takaiku
Honda, Yoichi
Kameshita, Isamu
Suzuki, Kazumi
Irie, Toshikazu
description We cloned complementary DNA (cDNA) corresponding to protein_id 10767 using transcripts extracted from a culture expressing ligninolytic enzymes, which is registered as a Ca2+-binding protein in the Phanerochaete chrysosporium whole genome database. We used our results to correct an amino acid sequence present in the database. Phylogenetic and southern blot analyses of this re-predicted sequence suggest that this is the sole gene encoding calmodulin (CaM) in this fungus. A P. chrysosporium CaM protein (PcCaM) fused to a His-tag was expressed in Escherichia coli. The His-PcCaM showed appropriate CaM features. ▶ We isolated cDNA of calmodulin (CaM) from Phanerochaete chrysosporium. ▶ The sequence corrected the coding region predicted in whole genome database. ▶ Southern blot analysis suggested the gene is the sole CaM gene in the fungus. ▶ The CaM gene was expressed in Escherichia coli. ▶ The recombinant protein showed appropriate CaM features.
doi_str_mv 10.1016/j.myc.2012.09.017
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1790939614</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S1340354012000368</els_id><sourcerecordid>1790939614</sourcerecordid><originalsourceid>FETCH-LOGICAL-c486t-415b07d080d80de21a7911331141f1c28e27e0d6a201846328d80925202785703</originalsourceid><addsrcrecordid>eNp9kEtLxDAUhYso-PwB7rp003pvmr5wJYOPAUUXCroKMb0zzdA2Y9IR5997y4hLISSB-53DuSeKzhFSBCwuV2m_NakAFCnUKWC5Fx1hgVUicpnv8z-TkGS5hMPoOIQVMFFk4ih6mwfX6dG6IdZDE7c0knedW7pNiOl77SmEaeYW8dhS_Nzqgeem1czFpvXb4MLaebvpY6O73jWbzg7xkgY6jQ4Wugt09vueRK-3Ny-z--Th6W4-u35IjKyKMZGYf0DZQAUNHxKoyxoxyxAlLtCIikRJ0BSaV6skR66Yq0UuQJRVXkJ2El3sfNfefW4ojKq3wVDXcVJeQmFZQ53VBUpGcYca70LwtFBrb3vttwpBTS2qleIW1dSiglpxR6y53WlWYdRL-lNoP1rT0cS7YKzKpcqm6_F9lksh8Q_grryigY2udkbEZXxZ8oplNBhqrCczqsbZf2L8ABBck4w</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1790939614</pqid></control><display><type>article</type><title>Isolation and heterologous expression of the Phanerochaete chrysosporium calmodulin gene</title><source>J-STAGE Free</source><creator>Sakamoto, Takaiku ; Honda, Yoichi ; Kameshita, Isamu ; Suzuki, Kazumi ; Irie, Toshikazu</creator><creatorcontrib>Sakamoto, Takaiku ; Honda, Yoichi ; Kameshita, Isamu ; Suzuki, Kazumi ; Irie, Toshikazu</creatorcontrib><description>We cloned complementary DNA (cDNA) corresponding to protein_id 10767 using transcripts extracted from a culture expressing ligninolytic enzymes, which is registered as a Ca2+-binding protein in the Phanerochaete chrysosporium whole genome database. We used our results to correct an amino acid sequence present in the database. Phylogenetic and southern blot analyses of this re-predicted sequence suggest that this is the sole gene encoding calmodulin (CaM) in this fungus. A P. chrysosporium CaM protein (PcCaM) fused to a His-tag was expressed in Escherichia coli. The His-PcCaM showed appropriate CaM features. ▶ We isolated cDNA of calmodulin (CaM) from Phanerochaete chrysosporium. ▶ The sequence corrected the coding region predicted in whole genome database. ▶ Southern blot analysis suggested the gene is the sole CaM gene in the fungus. ▶ The CaM gene was expressed in Escherichia coli. ▶ The recombinant protein showed appropriate CaM features.</description><identifier>ISSN: 1340-3540</identifier><identifier>EISSN: 1618-2545</identifier><identifier>DOI: 10.1016/j.myc.2012.09.017</identifier><language>eng</language><publisher>Elsevier B.V</publisher><subject>Basidiomycete ; Electrophoretic migration shift ; Escherichia coli ; Phanerochaete chrysosporium ; Pull-down analysis ; RACE analysis</subject><ispartof>Mycoscience, 2012, Vol.54(3), pp.241-246</ispartof><rights>2012 The Mycological Society of Japan</rights><rights>2012, by The Mycological Society of Japan</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c486t-415b07d080d80de21a7911331141f1c28e27e0d6a201846328d80925202785703</citedby><cites>FETCH-LOGICAL-c486t-415b07d080d80de21a7911331141f1c28e27e0d6a201846328d80925202785703</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,1883,27924,27925</link.rule.ids></links><search><creatorcontrib>Sakamoto, Takaiku</creatorcontrib><creatorcontrib>Honda, Yoichi</creatorcontrib><creatorcontrib>Kameshita, Isamu</creatorcontrib><creatorcontrib>Suzuki, Kazumi</creatorcontrib><creatorcontrib>Irie, Toshikazu</creatorcontrib><title>Isolation and heterologous expression of the Phanerochaete chrysosporium calmodulin gene</title><title>Mycoscience</title><description>We cloned complementary DNA (cDNA) corresponding to protein_id 10767 using transcripts extracted from a culture expressing ligninolytic enzymes, which is registered as a Ca2+-binding protein in the Phanerochaete chrysosporium whole genome database. We used our results to correct an amino acid sequence present in the database. Phylogenetic and southern blot analyses of this re-predicted sequence suggest that this is the sole gene encoding calmodulin (CaM) in this fungus. A P. chrysosporium CaM protein (PcCaM) fused to a His-tag was expressed in Escherichia coli. The His-PcCaM showed appropriate CaM features. ▶ We isolated cDNA of calmodulin (CaM) from Phanerochaete chrysosporium. ▶ The sequence corrected the coding region predicted in whole genome database. ▶ Southern blot analysis suggested the gene is the sole CaM gene in the fungus. ▶ The CaM gene was expressed in Escherichia coli. ▶ The recombinant protein showed appropriate CaM features.</description><subject>Basidiomycete</subject><subject>Electrophoretic migration shift</subject><subject>Escherichia coli</subject><subject>Phanerochaete chrysosporium</subject><subject>Pull-down analysis</subject><subject>RACE analysis</subject><issn>1340-3540</issn><issn>1618-2545</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><recordid>eNp9kEtLxDAUhYso-PwB7rp003pvmr5wJYOPAUUXCroKMb0zzdA2Y9IR5997y4hLISSB-53DuSeKzhFSBCwuV2m_NakAFCnUKWC5Fx1hgVUicpnv8z-TkGS5hMPoOIQVMFFk4ih6mwfX6dG6IdZDE7c0knedW7pNiOl77SmEaeYW8dhS_Nzqgeem1czFpvXb4MLaebvpY6O73jWbzg7xkgY6jQ4Wugt09vueRK-3Ny-z--Th6W4-u35IjKyKMZGYf0DZQAUNHxKoyxoxyxAlLtCIikRJ0BSaV6skR66Yq0UuQJRVXkJ2El3sfNfefW4ojKq3wVDXcVJeQmFZQ53VBUpGcYca70LwtFBrb3vttwpBTS2qleIW1dSiglpxR6y53WlWYdRL-lNoP1rT0cS7YKzKpcqm6_F9lksh8Q_grryigY2udkbEZXxZ8oplNBhqrCczqsbZf2L8ABBck4w</recordid><startdate>20130501</startdate><enddate>20130501</enddate><creator>Sakamoto, Takaiku</creator><creator>Honda, Yoichi</creator><creator>Kameshita, Isamu</creator><creator>Suzuki, Kazumi</creator><creator>Irie, Toshikazu</creator><general>Elsevier B.V</general><general>The Mycological Society of Japan</general><scope>AAYXX</scope><scope>CITATION</scope><scope>M7N</scope></search><sort><creationdate>20130501</creationdate><title>Isolation and heterologous expression of the Phanerochaete chrysosporium calmodulin gene</title><author>Sakamoto, Takaiku ; Honda, Yoichi ; Kameshita, Isamu ; Suzuki, Kazumi ; Irie, Toshikazu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c486t-415b07d080d80de21a7911331141f1c28e27e0d6a201846328d80925202785703</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Basidiomycete</topic><topic>Electrophoretic migration shift</topic><topic>Escherichia coli</topic><topic>Phanerochaete chrysosporium</topic><topic>Pull-down analysis</topic><topic>RACE analysis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sakamoto, Takaiku</creatorcontrib><creatorcontrib>Honda, Yoichi</creatorcontrib><creatorcontrib>Kameshita, Isamu</creatorcontrib><creatorcontrib>Suzuki, Kazumi</creatorcontrib><creatorcontrib>Irie, Toshikazu</creatorcontrib><collection>CrossRef</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><jtitle>Mycoscience</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sakamoto, Takaiku</au><au>Honda, Yoichi</au><au>Kameshita, Isamu</au><au>Suzuki, Kazumi</au><au>Irie, Toshikazu</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Isolation and heterologous expression of the Phanerochaete chrysosporium calmodulin gene</atitle><jtitle>Mycoscience</jtitle><date>2013-05-01</date><risdate>2013</risdate><volume>54</volume><issue>3</issue><spage>241</spage><epage>246</epage><pages>241-246</pages><issn>1340-3540</issn><eissn>1618-2545</eissn><abstract>We cloned complementary DNA (cDNA) corresponding to protein_id 10767 using transcripts extracted from a culture expressing ligninolytic enzymes, which is registered as a Ca2+-binding protein in the Phanerochaete chrysosporium whole genome database. We used our results to correct an amino acid sequence present in the database. Phylogenetic and southern blot analyses of this re-predicted sequence suggest that this is the sole gene encoding calmodulin (CaM) in this fungus. A P. chrysosporium CaM protein (PcCaM) fused to a His-tag was expressed in Escherichia coli. The His-PcCaM showed appropriate CaM features. ▶ We isolated cDNA of calmodulin (CaM) from Phanerochaete chrysosporium. ▶ The sequence corrected the coding region predicted in whole genome database. ▶ Southern blot analysis suggested the gene is the sole CaM gene in the fungus. ▶ The CaM gene was expressed in Escherichia coli. ▶ The recombinant protein showed appropriate CaM features.</abstract><pub>Elsevier B.V</pub><doi>10.1016/j.myc.2012.09.017</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1340-3540
ispartof Mycoscience, 2012, Vol.54(3), pp.241-246
issn 1340-3540
1618-2545
language eng
recordid cdi_proquest_miscellaneous_1790939614
source J-STAGE Free
subjects Basidiomycete
Electrophoretic migration shift
Escherichia coli
Phanerochaete chrysosporium
Pull-down analysis
RACE analysis
title Isolation and heterologous expression of the Phanerochaete chrysosporium calmodulin gene
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-04T12%3A03%3A14IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Isolation%20and%20heterologous%20expression%20of%20the%20Phanerochaete%20chrysosporium%20calmodulin%20gene&rft.jtitle=Mycoscience&rft.au=Sakamoto,%20Takaiku&rft.date=2013-05-01&rft.volume=54&rft.issue=3&rft.spage=241&rft.epage=246&rft.pages=241-246&rft.issn=1340-3540&rft.eissn=1618-2545&rft_id=info:doi/10.1016/j.myc.2012.09.017&rft_dat=%3Cproquest_cross%3E1790939614%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1790939614&rft_id=info:pmid/&rft_els_id=S1340354012000368&rfr_iscdi=true