Hepatitis B virus genotypes and HBsAg subtypes in refugees and injection drug users in the United States determined by LiPA and monoclonal EIA
Hepatitis B virus (HBV) genotyping and hepatitis B surface antigen (HBsAg) subtyping were carried out on sera from 196 HBsAg‐positive patients, including 151 refugees entering the United States and 45 injection drug users in Seattle. HBsAg subtyping was performed by enzyme immunoassay (EIA) using a...
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| creator | Swenson, Paul D. Van Geyt, Caroline Alexander, E. Russell Hagan, Holly Freitag-Koontz, Jayne M. Wilson, Shari Norder, Heléne Magnius, Lars O. Stuyver, Lieven |
| description | Hepatitis B virus (HBV) genotyping and hepatitis B surface antigen (HBsAg) subtyping were carried out on sera from 196 HBsAg‐positive patients, including 151 refugees entering the United States and 45 injection drug users in Seattle. HBsAg subtyping was performed by enzyme immunoassay (EIA) using a panel of monoclonal antibodies and the HBV genotype was determined by polymerase chain reaction (PCR) followed by detection of amplified HBV DNA by a reverse‐phase hybridization line probe assay (LiPA) using genotype‐specific probes. HBV DNA was detected by PCR in 155 (79%) of the 196 sera and all 155 were genotyped by LiPA. Samples from Southeast Asia were predominantly genotype B/subtype ayw1 and genotype C/adr; samples from the former Soviet Union and eastern Europe were mostly genotype D/ayw2 and genotype D/ayw3; samples from east Africa were mainly genotype A/adw2 and genotype D/ayw2; and samples from injection drug users were mostly genotype D/ayw3 and genotype A/adw2. Some strains of ayw3 gave atypical monoclonal antibody reactivity patterns in the subtyping assay due to a Val/Ala instead of a Thr at amino acid residue 118 and a Thr instead of a Met at residue 125. A strain of ayw2 also gave an atypical monoclonal antibody reactivity pattern due to an Ala instead of a Thr at amino acid residue 123. LiPA genotyping and monoclonal EIA subtyping can provide useful information for epidemiological studies. J. Med. Virol. 64:305–311, 2001. © 2001 Wiley‐Liss, Inc. |
| doi_str_mv | 10.1002/jmv.1051 |
| format | Article |
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Russell ; Hagan, Holly ; Freitag-Koontz, Jayne M. ; Wilson, Shari ; Norder, Heléne ; Magnius, Lars O. ; Stuyver, Lieven</creator><creatorcontrib>Swenson, Paul D. ; Van Geyt, Caroline ; Alexander, E. Russell ; Hagan, Holly ; Freitag-Koontz, Jayne M. ; Wilson, Shari ; Norder, Heléne ; Magnius, Lars O. ; Stuyver, Lieven</creatorcontrib><description>Hepatitis B virus (HBV) genotyping and hepatitis B surface antigen (HBsAg) subtyping were carried out on sera from 196 HBsAg‐positive patients, including 151 refugees entering the United States and 45 injection drug users in Seattle. HBsAg subtyping was performed by enzyme immunoassay (EIA) using a panel of monoclonal antibodies and the HBV genotype was determined by polymerase chain reaction (PCR) followed by detection of amplified HBV DNA by a reverse‐phase hybridization line probe assay (LiPA) using genotype‐specific probes. HBV DNA was detected by PCR in 155 (79%) of the 196 sera and all 155 were genotyped by LiPA. Samples from Southeast Asia were predominantly genotype B/subtype ayw1 and genotype C/adr; samples from the former Soviet Union and eastern Europe were mostly genotype D/ayw2 and genotype D/ayw3; samples from east Africa were mainly genotype A/adw2 and genotype D/ayw2; and samples from injection drug users were mostly genotype D/ayw3 and genotype A/adw2. Some strains of ayw3 gave atypical monoclonal antibody reactivity patterns in the subtyping assay due to a Val/Ala instead of a Thr at amino acid residue 118 and a Thr instead of a Met at residue 125. A strain of ayw2 also gave an atypical monoclonal antibody reactivity pattern due to an Ala instead of a Thr at amino acid residue 123. LiPA genotyping and monoclonal EIA subtyping can provide useful information for epidemiological studies. J. Med. Virol. 64:305–311, 2001. © 2001 Wiley‐Liss, Inc.</description><identifier>ISSN: 0146-6615</identifier><identifier>EISSN: 1096-9071</identifier><identifier>DOI: 10.1002/jmv.1051</identifier><identifier>PMID: 11424119</identifier><identifier>CODEN: JMVIDB</identifier><language>eng</language><publisher>New York: John Wiley & Sons, Inc</publisher><subject>Africa, Eastern - epidemiology ; Africa, Eastern - ethnology ; Amino Acid Sequence ; Antibodies, Monoclonal - classification ; Antibodies, Monoclonal - immunology ; Asia, Southeastern - epidemiology ; Asia, Southeastern - ethnology ; Base Sequence ; Biological and medical sciences ; Consensus Sequence ; Europe, Eastern - epidemiology ; Europe, Eastern - ethnology ; Fundamental and applied biological sciences. Psychology ; Genotype ; genotypes ; Haiti - epidemiology ; Haiti - ethnology ; Hepatitis B - epidemiology ; Hepatitis B - virology ; Hepatitis B e Antigens - analysis ; hepatitis B surface antigen ; Hepatitis B Surface Antigens - analysis ; Hepatitis B Surface Antigens - blood ; Hepatitis B Surface Antigens - classification ; Hepatitis B Surface Antigens - immunology ; Hepatitis B virus ; Hepatitis B virus - classification ; Hepatitis B virus - genetics ; Hepatitis B virus - immunology ; Humans ; Immunoenzyme Techniques ; line probe assay ; Microbiology ; Middle Aged ; Middle East - epidemiology ; Middle East - ethnology ; monoclonal antibody ; Northwestern United States ; Reagent Kits, Diagnostic ; Refugees ; Substance Abuse, Intravenous - virology ; subtypes ; United States ; USSR - epidemiology ; USSR - ethnology</subject><ispartof>Journal of medical virology, 2001-07, Vol.64 (3), p.305-311</ispartof><rights>Copyright © 2001 Wiley‐Liss, Inc.</rights><rights>2002 INIST-CNRS</rights><rights>Copyright 2001 Wiley-Liss, Inc.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4161-87ba12b04a3787c6f6e0d407f76ff4a9afa1721ab397f81be18223238c52bb463</citedby><cites>FETCH-LOGICAL-c4161-87ba12b04a3787c6f6e0d407f76ff4a9afa1721ab397f81be18223238c52bb463</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fjmv.1051$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fjmv.1051$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1416,27922,27923,45572,45573</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=14164238$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11424119$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Swenson, Paul D.</creatorcontrib><creatorcontrib>Van Geyt, Caroline</creatorcontrib><creatorcontrib>Alexander, E. Russell</creatorcontrib><creatorcontrib>Hagan, Holly</creatorcontrib><creatorcontrib>Freitag-Koontz, Jayne M.</creatorcontrib><creatorcontrib>Wilson, Shari</creatorcontrib><creatorcontrib>Norder, Heléne</creatorcontrib><creatorcontrib>Magnius, Lars O.</creatorcontrib><creatorcontrib>Stuyver, Lieven</creatorcontrib><title>Hepatitis B virus genotypes and HBsAg subtypes in refugees and injection drug users in the United States determined by LiPA and monoclonal EIA</title><title>Journal of medical virology</title><addtitle>J. Med. Virol</addtitle><description>Hepatitis B virus (HBV) genotyping and hepatitis B surface antigen (HBsAg) subtyping were carried out on sera from 196 HBsAg‐positive patients, including 151 refugees entering the United States and 45 injection drug users in Seattle. HBsAg subtyping was performed by enzyme immunoassay (EIA) using a panel of monoclonal antibodies and the HBV genotype was determined by polymerase chain reaction (PCR) followed by detection of amplified HBV DNA by a reverse‐phase hybridization line probe assay (LiPA) using genotype‐specific probes. HBV DNA was detected by PCR in 155 (79%) of the 196 sera and all 155 were genotyped by LiPA. Samples from Southeast Asia were predominantly genotype B/subtype ayw1 and genotype C/adr; samples from the former Soviet Union and eastern Europe were mostly genotype D/ayw2 and genotype D/ayw3; samples from east Africa were mainly genotype A/adw2 and genotype D/ayw2; and samples from injection drug users were mostly genotype D/ayw3 and genotype A/adw2. Some strains of ayw3 gave atypical monoclonal antibody reactivity patterns in the subtyping assay due to a Val/Ala instead of a Thr at amino acid residue 118 and a Thr instead of a Met at residue 125. A strain of ayw2 also gave an atypical monoclonal antibody reactivity pattern due to an Ala instead of a Thr at amino acid residue 123. LiPA genotyping and monoclonal EIA subtyping can provide useful information for epidemiological studies. J. Med. Virol. 64:305–311, 2001. © 2001 Wiley‐Liss, Inc.</description><subject>Africa, Eastern - epidemiology</subject><subject>Africa, Eastern - ethnology</subject><subject>Amino Acid Sequence</subject><subject>Antibodies, Monoclonal - classification</subject><subject>Antibodies, Monoclonal - immunology</subject><subject>Asia, Southeastern - epidemiology</subject><subject>Asia, Southeastern - ethnology</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Consensus Sequence</subject><subject>Europe, Eastern - epidemiology</subject><subject>Europe, Eastern - ethnology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genotype</subject><subject>genotypes</subject><subject>Haiti - epidemiology</subject><subject>Haiti - ethnology</subject><subject>Hepatitis B - epidemiology</subject><subject>Hepatitis B - virology</subject><subject>Hepatitis B e Antigens - analysis</subject><subject>hepatitis B surface antigen</subject><subject>Hepatitis B Surface Antigens - analysis</subject><subject>Hepatitis B Surface Antigens - blood</subject><subject>Hepatitis B Surface Antigens - classification</subject><subject>Hepatitis B Surface Antigens - immunology</subject><subject>Hepatitis B virus</subject><subject>Hepatitis B virus - classification</subject><subject>Hepatitis B virus - genetics</subject><subject>Hepatitis B virus - immunology</subject><subject>Humans</subject><subject>Immunoenzyme Techniques</subject><subject>line probe assay</subject><subject>Microbiology</subject><subject>Middle Aged</subject><subject>Middle East - epidemiology</subject><subject>Middle East - ethnology</subject><subject>monoclonal antibody</subject><subject>Northwestern United States</subject><subject>Reagent Kits, Diagnostic</subject><subject>Refugees</subject><subject>Substance Abuse, Intravenous - virology</subject><subject>subtypes</subject><subject>United States</subject><subject>USSR - epidemiology</subject><subject>USSR - ethnology</subject><issn>0146-6615</issn><issn>1096-9071</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2001</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp10MFu1DAQBmALgehSkHgC5AuIS4rH8drJcVuVbqttQYICN8tJJouXxFlsp7AvwTPX7Ub01JOt8acZz0_Ia2BHwBj_sOlv0mUOT8gMWCmzkil4SmYMhMykhPkBeRHChjFWlJw_JwcAgguAckb-LXFroo020GN6Y_0Y6BrdEHdbDNS4hi6Pw2JNw1jtS9ZRj-24xunZug3W0Q6ONn5c0zGgv0fxJ9JrZyM29Es0MekGI_reulSpdnRlPy_uG_SDG-pucKajp-eLl-RZa7qAr6bzkFx_PP16ssxWn87OTxarrBYgIStUZYBXTJhcFaqWrUTWCKZaJdtWmNK0BhQHU-WlaguoEArOc54X9ZxXlZD5IXm377v1w-8RQ9S9DTV2nXE4jEGDKgrIS0jw_R7Wfgghra633vbG7zQwfZe9Ttnru-wTfTP1HKsemwc4hZ3A2wmYUJuu9cbVNjy4tJpIf0wu27s_tsPdowP1xeW3afDkbYj49783_peWKldz_f3qTLNlcaHgkusf-S1a-anK</recordid><startdate>200107</startdate><enddate>200107</enddate><creator>Swenson, Paul D.</creator><creator>Van Geyt, Caroline</creator><creator>Alexander, E. Russell</creator><creator>Hagan, Holly</creator><creator>Freitag-Koontz, Jayne M.</creator><creator>Wilson, Shari</creator><creator>Norder, Heléne</creator><creator>Magnius, Lars O.</creator><creator>Stuyver, Lieven</creator><general>John Wiley & Sons, Inc</general><general>Wiley-Liss</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7U9</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>200107</creationdate><title>Hepatitis B virus genotypes and HBsAg subtypes in refugees and injection drug users in the United States determined by LiPA and monoclonal EIA</title><author>Swenson, Paul D. ; Van Geyt, Caroline ; Alexander, E. Russell ; Hagan, Holly ; Freitag-Koontz, Jayne M. ; Wilson, Shari ; Norder, Heléne ; Magnius, Lars O. ; Stuyver, Lieven</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4161-87ba12b04a3787c6f6e0d407f76ff4a9afa1721ab397f81be18223238c52bb463</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2001</creationdate><topic>Africa, Eastern - epidemiology</topic><topic>Africa, Eastern - ethnology</topic><topic>Amino Acid Sequence</topic><topic>Antibodies, Monoclonal - classification</topic><topic>Antibodies, Monoclonal - immunology</topic><topic>Asia, Southeastern - epidemiology</topic><topic>Asia, Southeastern - ethnology</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Consensus Sequence</topic><topic>Europe, Eastern - epidemiology</topic><topic>Europe, Eastern - ethnology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genotype</topic><topic>genotypes</topic><topic>Haiti - epidemiology</topic><topic>Haiti - ethnology</topic><topic>Hepatitis B - epidemiology</topic><topic>Hepatitis B - virology</topic><topic>Hepatitis B e Antigens - analysis</topic><topic>hepatitis B surface antigen</topic><topic>Hepatitis B Surface Antigens - analysis</topic><topic>Hepatitis B Surface Antigens - blood</topic><topic>Hepatitis B Surface Antigens - classification</topic><topic>Hepatitis B Surface Antigens - immunology</topic><topic>Hepatitis B virus</topic><topic>Hepatitis B virus - classification</topic><topic>Hepatitis B virus - genetics</topic><topic>Hepatitis B virus - immunology</topic><topic>Humans</topic><topic>Immunoenzyme Techniques</topic><topic>line probe assay</topic><topic>Microbiology</topic><topic>Middle Aged</topic><topic>Middle East - epidemiology</topic><topic>Middle East - ethnology</topic><topic>monoclonal antibody</topic><topic>Northwestern United States</topic><topic>Reagent Kits, Diagnostic</topic><topic>Refugees</topic><topic>Substance Abuse, Intravenous - virology</topic><topic>subtypes</topic><topic>United States</topic><topic>USSR - epidemiology</topic><topic>USSR - ethnology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Swenson, Paul D.</creatorcontrib><creatorcontrib>Van Geyt, Caroline</creatorcontrib><creatorcontrib>Alexander, E. 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Russell</au><au>Hagan, Holly</au><au>Freitag-Koontz, Jayne M.</au><au>Wilson, Shari</au><au>Norder, Heléne</au><au>Magnius, Lars O.</au><au>Stuyver, Lieven</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Hepatitis B virus genotypes and HBsAg subtypes in refugees and injection drug users in the United States determined by LiPA and monoclonal EIA</atitle><jtitle>Journal of medical virology</jtitle><addtitle>J. Med. Virol</addtitle><date>2001-07</date><risdate>2001</risdate><volume>64</volume><issue>3</issue><spage>305</spage><epage>311</epage><pages>305-311</pages><issn>0146-6615</issn><eissn>1096-9071</eissn><coden>JMVIDB</coden><abstract>Hepatitis B virus (HBV) genotyping and hepatitis B surface antigen (HBsAg) subtyping were carried out on sera from 196 HBsAg‐positive patients, including 151 refugees entering the United States and 45 injection drug users in Seattle. HBsAg subtyping was performed by enzyme immunoassay (EIA) using a panel of monoclonal antibodies and the HBV genotype was determined by polymerase chain reaction (PCR) followed by detection of amplified HBV DNA by a reverse‐phase hybridization line probe assay (LiPA) using genotype‐specific probes. HBV DNA was detected by PCR in 155 (79%) of the 196 sera and all 155 were genotyped by LiPA. Samples from Southeast Asia were predominantly genotype B/subtype ayw1 and genotype C/adr; samples from the former Soviet Union and eastern Europe were mostly genotype D/ayw2 and genotype D/ayw3; samples from east Africa were mainly genotype A/adw2 and genotype D/ayw2; and samples from injection drug users were mostly genotype D/ayw3 and genotype A/adw2. Some strains of ayw3 gave atypical monoclonal antibody reactivity patterns in the subtyping assay due to a Val/Ala instead of a Thr at amino acid residue 118 and a Thr instead of a Met at residue 125. A strain of ayw2 also gave an atypical monoclonal antibody reactivity pattern due to an Ala instead of a Thr at amino acid residue 123. LiPA genotyping and monoclonal EIA subtyping can provide useful information for epidemiological studies. J. Med. Virol. 64:305–311, 2001. © 2001 Wiley‐Liss, Inc.</abstract><cop>New York</cop><pub>John Wiley & Sons, Inc</pub><pmid>11424119</pmid><doi>10.1002/jmv.1051</doi><tpages>7</tpages></addata></record> |
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| subjects | Africa, Eastern - epidemiology Africa, Eastern - ethnology Amino Acid Sequence Antibodies, Monoclonal - classification Antibodies, Monoclonal - immunology Asia, Southeastern - epidemiology Asia, Southeastern - ethnology Base Sequence Biological and medical sciences Consensus Sequence Europe, Eastern - epidemiology Europe, Eastern - ethnology Fundamental and applied biological sciences. Psychology Genotype genotypes Haiti - epidemiology Haiti - ethnology Hepatitis B - epidemiology Hepatitis B - virology Hepatitis B e Antigens - analysis hepatitis B surface antigen Hepatitis B Surface Antigens - analysis Hepatitis B Surface Antigens - blood Hepatitis B Surface Antigens - classification Hepatitis B Surface Antigens - immunology Hepatitis B virus Hepatitis B virus - classification Hepatitis B virus - genetics Hepatitis B virus - immunology Humans Immunoenzyme Techniques line probe assay Microbiology Middle Aged Middle East - epidemiology Middle East - ethnology monoclonal antibody Northwestern United States Reagent Kits, Diagnostic Refugees Substance Abuse, Intravenous - virology subtypes United States USSR - epidemiology USSR - ethnology |
| title | Hepatitis B virus genotypes and HBsAg subtypes in refugees and injection drug users in the United States determined by LiPA and monoclonal EIA |
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