No correlation between NF1 mutation position and risk of optic pathway glioma in 77 unrelated NF1 patients
Neurofibromatosis type 1 (NF1) is a common monogenic disorder whereby affected individuals are predisposed to developing CNS tumors, including optic pathway gliomas (OPGs, occurring in ~15 to 20 % of cases). So far, no definite genotype–phenotype correlation determining NF1 patients at risk for tumo...
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creator | Hutter, Sonja Piro, Rosario M. Waszak, Sebastian M. Kehrer-Sawatzki, Hildegard Friedrich, Reinhard E. Lassaletta, Alvaro Witt, Olaf Korbel, Jan O. Lichter, Peter Schuhmann, Martin U. Pfister, Stefan M. Tabori, Uri Mautner, Victor F. Jones, David T. W. |
description | Neurofibromatosis type 1 (NF1) is a common monogenic disorder whereby affected individuals are predisposed to developing CNS tumors, including optic pathway gliomas (OPGs, occurring in ~15 to 20 % of cases). So far, no definite genotype–phenotype correlation determining NF1 patients at risk for tumor formation has been described, although enrichment for mutations in the 5′ region of the
NF1
gene in OPG patients has been suggested. We used whole exome sequencing, targeted sequencing, and copy number analysis to screen 77 unrelated NF1 patients with (
n
= 41) or without (
n
= 36; age ≥10 years) optic pathway glioma for germline
NF1
alterations. We identified germline
NF1
mutations in 69 of 77 patients (90 %), but no genotype–phenotype correlation was observed. Our data using a larger patient cohort did not confirm the previously reported clustering of mutations in the 5′ region of the
NF1
gene in patients with OPG. Thus,
NF1
mutation location should not currently be used as a clinical criterion to assess the risk of developing OPGs. |
doi_str_mv | 10.1007/s00439-016-1646-x |
format | Article |
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NF1
gene in OPG patients has been suggested. We used whole exome sequencing, targeted sequencing, and copy number analysis to screen 77 unrelated NF1 patients with (
n
= 41) or without (
n
= 36; age ≥10 years) optic pathway glioma for germline
NF1
alterations. We identified germline
NF1
mutations in 69 of 77 patients (90 %), but no genotype–phenotype correlation was observed. Our data using a larger patient cohort did not confirm the previously reported clustering of mutations in the 5′ region of the
NF1
gene in patients with OPG. Thus,
NF1
mutation location should not currently be used as a clinical criterion to assess the risk of developing OPGs.</description><identifier>ISSN: 0340-6717</identifier><identifier>EISSN: 1432-1203</identifier><identifier>DOI: 10.1007/s00439-016-1646-x</identifier><identifier>PMID: 26969325</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Biomedical and Life Sciences ; Biomedicine ; Cancer research ; Case-Control Studies ; Child ; Cohort Studies ; Consortia ; Development and progression ; Ethylenediaminetetraacetic acid ; Exome - genetics ; Female ; Follow-Up Studies ; Gene Function ; Genetic aspects ; Genetic Association Studies ; Genetic counseling ; Genetic testing ; Genetics ; Gliomas ; Hematology ; Human Genetics ; Humans ; Male ; Medical research ; Metabolic Diseases ; Molecular Medicine ; Mutation ; Mutation - genetics ; Neurofibromatosis 1 - complications ; Neurofibromatosis 1 - genetics ; Neurofibromin 1 - genetics ; Oncology ; Optic Nerve Glioma - etiology ; Original Investigation ; Pediatrics ; Prognosis ; Research centers ; Risk Factors ; Tumors</subject><ispartof>Human genetics, 2016-05, Vol.135 (5), p.469-475</ispartof><rights>Springer-Verlag Berlin Heidelberg 2016</rights><rights>COPYRIGHT 2016 Springer</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c506t-3483688adb844b27a3c48879b7560b86473263872690a33df6f842247faf5e553</citedby><cites>FETCH-LOGICAL-c506t-3483688adb844b27a3c48879b7560b86473263872690a33df6f842247faf5e553</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00439-016-1646-x$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00439-016-1646-x$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26969325$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hutter, Sonja</creatorcontrib><creatorcontrib>Piro, Rosario M.</creatorcontrib><creatorcontrib>Waszak, Sebastian M.</creatorcontrib><creatorcontrib>Kehrer-Sawatzki, Hildegard</creatorcontrib><creatorcontrib>Friedrich, Reinhard E.</creatorcontrib><creatorcontrib>Lassaletta, Alvaro</creatorcontrib><creatorcontrib>Witt, Olaf</creatorcontrib><creatorcontrib>Korbel, Jan O.</creatorcontrib><creatorcontrib>Lichter, Peter</creatorcontrib><creatorcontrib>Schuhmann, Martin U.</creatorcontrib><creatorcontrib>Pfister, Stefan M.</creatorcontrib><creatorcontrib>Tabori, Uri</creatorcontrib><creatorcontrib>Mautner, Victor F.</creatorcontrib><creatorcontrib>Jones, David T. W.</creatorcontrib><title>No correlation between NF1 mutation position and risk of optic pathway glioma in 77 unrelated NF1 patients</title><title>Human genetics</title><addtitle>Hum Genet</addtitle><addtitle>Hum Genet</addtitle><description>Neurofibromatosis type 1 (NF1) is a common monogenic disorder whereby affected individuals are predisposed to developing CNS tumors, including optic pathway gliomas (OPGs, occurring in ~15 to 20 % of cases). So far, no definite genotype–phenotype correlation determining NF1 patients at risk for tumor formation has been described, although enrichment for mutations in the 5′ region of the
NF1
gene in OPG patients has been suggested. We used whole exome sequencing, targeted sequencing, and copy number analysis to screen 77 unrelated NF1 patients with (
n
= 41) or without (
n
= 36; age ≥10 years) optic pathway glioma for germline
NF1
alterations. We identified germline
NF1
mutations in 69 of 77 patients (90 %), but no genotype–phenotype correlation was observed. Our data using a larger patient cohort did not confirm the previously reported clustering of mutations in the 5′ region of the
NF1
gene in patients with OPG. Thus,
NF1
mutation location should not currently be used as a clinical criterion to assess the risk of developing OPGs.</description><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Cancer research</subject><subject>Case-Control Studies</subject><subject>Child</subject><subject>Cohort Studies</subject><subject>Consortia</subject><subject>Development and progression</subject><subject>Ethylenediaminetetraacetic acid</subject><subject>Exome - genetics</subject><subject>Female</subject><subject>Follow-Up Studies</subject><subject>Gene Function</subject><subject>Genetic aspects</subject><subject>Genetic Association Studies</subject><subject>Genetic counseling</subject><subject>Genetic testing</subject><subject>Genetics</subject><subject>Gliomas</subject><subject>Hematology</subject><subject>Human Genetics</subject><subject>Humans</subject><subject>Male</subject><subject>Medical research</subject><subject>Metabolic Diseases</subject><subject>Molecular Medicine</subject><subject>Mutation</subject><subject>Mutation - genetics</subject><subject>Neurofibromatosis 1 - complications</subject><subject>Neurofibromatosis 1 - genetics</subject><subject>Neurofibromin 1 - genetics</subject><subject>Oncology</subject><subject>Optic Nerve Glioma - etiology</subject><subject>Original Investigation</subject><subject>Pediatrics</subject><subject>Prognosis</subject><subject>Research centers</subject><subject>Risk Factors</subject><subject>Tumors</subject><issn>0340-6717</issn><issn>1432-1203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNqNkl1rFDEYhYModlv9Ad5IwBu9mJrvZC5LaW2hVPDjOmRmMmvWmWRNMnT7783s1I8VBclFwpvnnJcDB4AXGJ1ihOTbhBCjdYWwqLBgoto9AivMKKkwQfQxWCHKUCUklkfgOKUNQpjXhD8FR0TUoqaEr8DmNsA2xGgHk13wsLH5zloPby8xHKe8DLchuf3D-A5Gl77C0MOwza6FW5O_3Jl7uB5cGA10HkoJJ7_3s93epiDO-pyegSe9GZJ9_nCfgM-XF5_Or6qb9--uz89uqpYjkSvKFBVKma5RjDVEGtoypWTdSC5QowSTlAiqZMmADKVdL3rFCGGyNz23nNMT8Hrx3cbwbbIp69Gl1g6D8TZMSWNZ3Oqy5b9QoigWihb01R_oJkzRlyAzhfnMqV_U2gxWO9-HHE07m-ozxuqa15LKQp3-hSqns6Nrg7e9K_MDwZsDQWGy3eW1mVLS1x8_HLJ4YdsYUoq219voRhPvNUZ6ro1eaqNLbfRcG70rmpcP4aZmtN1PxY-eFIAsQCpffm3jb-n_6fod-pbIpA</recordid><startdate>20160501</startdate><enddate>20160501</enddate><creator>Hutter, Sonja</creator><creator>Piro, Rosario M.</creator><creator>Waszak, Sebastian M.</creator><creator>Kehrer-Sawatzki, Hildegard</creator><creator>Friedrich, Reinhard E.</creator><creator>Lassaletta, Alvaro</creator><creator>Witt, Olaf</creator><creator>Korbel, Jan O.</creator><creator>Lichter, Peter</creator><creator>Schuhmann, Martin U.</creator><creator>Pfister, Stefan M.</creator><creator>Tabori, Uri</creator><creator>Mautner, Victor F.</creator><creator>Jones, David T. 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W.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>No correlation between NF1 mutation position and risk of optic pathway glioma in 77 unrelated NF1 patients</atitle><jtitle>Human genetics</jtitle><stitle>Hum Genet</stitle><addtitle>Hum Genet</addtitle><date>2016-05-01</date><risdate>2016</risdate><volume>135</volume><issue>5</issue><spage>469</spage><epage>475</epage><pages>469-475</pages><issn>0340-6717</issn><eissn>1432-1203</eissn><abstract>Neurofibromatosis type 1 (NF1) is a common monogenic disorder whereby affected individuals are predisposed to developing CNS tumors, including optic pathway gliomas (OPGs, occurring in ~15 to 20 % of cases). So far, no definite genotype–phenotype correlation determining NF1 patients at risk for tumor formation has been described, although enrichment for mutations in the 5′ region of the
NF1
gene in OPG patients has been suggested. We used whole exome sequencing, targeted sequencing, and copy number analysis to screen 77 unrelated NF1 patients with (
n
= 41) or without (
n
= 36; age ≥10 years) optic pathway glioma for germline
NF1
alterations. We identified germline
NF1
mutations in 69 of 77 patients (90 %), but no genotype–phenotype correlation was observed. Our data using a larger patient cohort did not confirm the previously reported clustering of mutations in the 5′ region of the
NF1
gene in patients with OPG. Thus,
NF1
mutation location should not currently be used as a clinical criterion to assess the risk of developing OPGs.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>26969325</pmid><doi>10.1007/s00439-016-1646-x</doi><tpages>7</tpages></addata></record> |
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subjects | Biomedical and Life Sciences Biomedicine Cancer research Case-Control Studies Child Cohort Studies Consortia Development and progression Ethylenediaminetetraacetic acid Exome - genetics Female Follow-Up Studies Gene Function Genetic aspects Genetic Association Studies Genetic counseling Genetic testing Genetics Gliomas Hematology Human Genetics Humans Male Medical research Metabolic Diseases Molecular Medicine Mutation Mutation - genetics Neurofibromatosis 1 - complications Neurofibromatosis 1 - genetics Neurofibromin 1 - genetics Oncology Optic Nerve Glioma - etiology Original Investigation Pediatrics Prognosis Research centers Risk Factors Tumors |
title | No correlation between NF1 mutation position and risk of optic pathway glioma in 77 unrelated NF1 patients |
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